Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.84■□□□□ 0.77
LYSTQ99698 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LYSTQ99698 AC087741.3-201ENST00000624270 1347 ntBASIC19.81■□□□□ 0.76
LYSTQ99698 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LYSTQ99698 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.79■□□□□ 0.76
LYSTQ99698 DUX4L28-201ENST00000623687 678 ntBASIC19.79■□□□□ 0.76
LYSTQ99698 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LYSTQ99698 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.78■□□□□ 0.76
LYSTQ99698 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
LYSTQ99698 MIR3665-201ENST00000578708 105 ntBASIC19.77■□□□□ 0.75
LYSTQ99698 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LYSTQ99698 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LYSTQ99698 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.75■□□□□ 0.75
LYSTQ99698 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.74■□□□□ 0.75
LYSTQ99698 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.73■□□□□ 0.75
LYSTQ99698 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.72■□□□□ 0.75
LYSTQ99698 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LYSTQ99698 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.7■□□□□ 0.74
LYSTQ99698 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.7■□□□□ 0.74
LYSTQ99698 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
LYSTQ99698 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.69■□□□□ 0.74
LYSTQ99698 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSTQ99698 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.68■□□□□ 0.74
LYSTQ99698 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSTQ99698 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSTQ99698 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSTQ99698 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSTQ99698 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSTQ99698 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSTQ99698 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.66■□□□□ 0.74
LYSTQ99698 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSTQ99698 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSTQ99698 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSTQ99698 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LYSTQ99698 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSTQ99698 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSTQ99698 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSTQ99698 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSTQ99698 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSTQ99698 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LYSTQ99698 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSTQ99698 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LYSTQ99698 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LYSTQ99698 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSTQ99698 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.59■□□□□ 0.73
LYSTQ99698 AL133380.1-201ENST00000506013 324 ntBASIC19.58■□□□□ 0.73
LYSTQ99698 AC044849.2-201ENST00000606596 710 ntBASIC19.58■□□□□ 0.73
LYSTQ99698 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSTQ99698 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSTQ99698 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LYSTQ99698 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LYSTQ99698 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.55■□□□□ 0.72
LYSTQ99698 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.55■□□□□ 0.72
LYSTQ99698 MIR762-201ENST00000390236 83 ntBASIC19.54■□□□□ 0.72
LYSTQ99698 MIR4449-201ENST00000578365 66 ntBASIC19.53■□□□□ 0.72
LYSTQ99698 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSTQ99698 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSTQ99698 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LYSTQ99698 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.53■□□□□ 0.72
LYSTQ99698 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LYSTQ99698 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LYSTQ99698 HSD17B1P1-201ENST00000590052 955 ntBASIC19.5■□□□□ 0.71
LYSTQ99698 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LYSTQ99698 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSTQ99698 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSTQ99698 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.48■□□□□ 0.71
LYSTQ99698 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSTQ99698 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSTQ99698 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSTQ99698 AC005559.1-201ENST00000589661 871 ntBASIC19.46■□□□□ 0.71
LYSTQ99698 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSTQ99698 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LYSTQ99698 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.44■□□□□ 0.7
LYSTQ99698 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LYSTQ99698 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LYSTQ99698 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LYSTQ99698 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSTQ99698 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LYSTQ99698 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LYSTQ99698 MIR639-201ENST00000384974 98 ntBASIC19.36■□□□□ 0.69
LYSTQ99698 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LYSTQ99698 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.36■□□□□ 0.69
LYSTQ99698 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSTQ99698 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LYSTQ99698 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LYSTQ99698 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.35■□□□□ 0.69
LYSTQ99698 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYSTQ99698 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.34■□□□□ 0.69
LYSTQ99698 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYSTQ99698 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYSTQ99698 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSTQ99698 ZNRF2P2-203ENST00000454624 420 ntBASIC19.32■□□□□ 0.68
LYSTQ99698 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSTQ99698 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSTQ99698 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSTQ99698 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYSTQ99698 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.31■□□□□ 0.68
LYSTQ99698 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSTQ99698 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSTQ99698 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms