Protein–RNA interactions for Protein: Q92832

NELL1, Protein kinase C-binding protein NELL1, humanhuman

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL1Q92832 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
NELL1Q92832 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
NELL1Q92832 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
NELL1Q92832 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NELL1Q92832 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NELL1Q92832 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NELL1Q92832 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NELL1Q92832 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.61■■■□□ 2.17
NELL1Q92832 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.6■■■□□ 2.17
NELL1Q92832 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.59■■■□□ 2.17
NELL1Q92832 ABHD17AP4-201ENST00000411545 909 ntBASIC28.58■■■□□ 2.17
NELL1Q92832 MIR7108-201ENST00000614319 87 ntBASIC28.57■■■□□ 2.16
NELL1Q92832 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NELL1Q92832 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.55■■■□□ 2.16
NELL1Q92832 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
NELL1Q92832 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
NELL1Q92832 AL133380.1-201ENST00000506013 324 ntBASIC28.53■■■□□ 2.16
NELL1Q92832 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
NELL1Q92832 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.52■■■□□ 2.16
NELL1Q92832 AC145285.7-201ENST00000614819 1539 ntBASIC28.52■■■□□ 2.16
NELL1Q92832 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.51■■■□□ 2.15
NELL1Q92832 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.51■■■□□ 2.15
NELL1Q92832 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
NELL1Q92832 MIR3665-201ENST00000578708 105 ntBASIC28.48■■■□□ 2.15
NELL1Q92832 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NELL1Q92832 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NELL1Q92832 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.47■■■□□ 2.15
NELL1Q92832 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NELL1Q92832 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
NELL1Q92832 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.43■■■□□ 2.14
NELL1Q92832 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
NELL1Q92832 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.42■■■□□ 2.14
NELL1Q92832 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NELL1Q92832 AC087741.3-201ENST00000624270 1347 ntBASIC28.4■■■□□ 2.14
NELL1Q92832 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.38■■■□□ 2.13
NELL1Q92832 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.37■■■□□ 2.13
NELL1Q92832 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NELL1Q92832 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NELL1Q92832 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NELL1Q92832 DUX4L28-201ENST00000623687 678 ntBASIC28.31■■■□□ 2.12
NELL1Q92832 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NELL1Q92832 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.3■■■□□ 2.12
NELL1Q92832 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NELL1Q92832 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
NELL1Q92832 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.28■■■□□ 2.12
NELL1Q92832 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
NELL1Q92832 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NELL1Q92832 HLA-V-202ENST00000446817 847 ntBASIC28.27■■■□□ 2.12
NELL1Q92832 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NELL1Q92832 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.25■■■□□ 2.11
NELL1Q92832 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.25■■■□□ 2.11
NELL1Q92832 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.24■■■□□ 2.11
NELL1Q92832 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
NELL1Q92832 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.23■■■□□ 2.11
NELL1Q92832 AC044849.2-201ENST00000606596 710 ntBASIC28.23■■■□□ 2.11
NELL1Q92832 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.23■■■□□ 2.11
NELL1Q92832 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.22■■■□□ 2.11
NELL1Q92832 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.21■■■□□ 2.11
NELL1Q92832 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NELL1Q92832 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.18■■■□□ 2.1
NELL1Q92832 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.17■■■□□ 2.1
NELL1Q92832 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
NELL1Q92832 MIR762-201ENST00000390236 83 ntBASIC28.16■■■□□ 2.1
NELL1Q92832 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
NELL1Q92832 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
NELL1Q92832 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
NELL1Q92832 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
NELL1Q92832 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NELL1Q92832 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NELL1Q92832 AC005559.1-201ENST00000589661 871 ntBASIC28.1■■■□□ 2.09
NELL1Q92832 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.1■■■□□ 2.09
NELL1Q92832 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.09■■■□□ 2.09
NELL1Q92832 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.09■■■□□ 2.09
NELL1Q92832 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
NELL1Q92832 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
NELL1Q92832 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.05■■■□□ 2.08
NELL1Q92832 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.05■■■□□ 2.08
NELL1Q92832 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.05■■■□□ 2.08
NELL1Q92832 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NELL1Q92832 ZNRF2P2-203ENST00000454624 420 ntBASIC28.04■■■□□ 2.08
NELL1Q92832 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NELL1Q92832 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NELL1Q92832 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
NELL1Q92832 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.02■■■□□ 2.08
NELL1Q92832 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NELL1Q92832 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.01■■■□□ 2.07
NELL1Q92832 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.01■■■□□ 2.07
NELL1Q92832 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.99■■■□□ 2.07
NELL1Q92832 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.99■■■□□ 2.07
NELL1Q92832 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NELL1Q92832 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.98■■■□□ 2.07
NELL1Q92832 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.98■■■□□ 2.07
NELL1Q92832 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
NELL1Q92832 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
NELL1Q92832 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.95■■■□□ 2.06
NELL1Q92832 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
NELL1Q92832 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
NELL1Q92832 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
NELL1Q92832 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.91■■■□□ 2.06
NELL1Q92832 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms