Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SHKBP1Q8TBC3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
SHKBP1Q8TBC3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SHKBP1Q8TBC3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SHKBP1Q8TBC3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.37■■■□□ 2.29
SHKBP1Q8TBC3 CAHM-201ENST00000604200 896 ntBASIC29.37■■■□□ 2.29
SHKBP1Q8TBC3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SHKBP1Q8TBC3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SHKBP1Q8TBC3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SHKBP1Q8TBC3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.34■■■□□ 2.29
SHKBP1Q8TBC3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
SHKBP1Q8TBC3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.31■■■□□ 2.28
SHKBP1Q8TBC3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SHKBP1Q8TBC3 AL133380.1-201ENST00000506013 324 ntBASIC29.3■■■□□ 2.28
SHKBP1Q8TBC3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHKBP1Q8TBC3 RPS2P35-201ENST00000443417 897 ntBASIC29.29■■■□□ 2.28
SHKBP1Q8TBC3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHKBP1Q8TBC3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHKBP1Q8TBC3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SHKBP1Q8TBC3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SHKBP1Q8TBC3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.27■■■□□ 2.28
SHKBP1Q8TBC3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.25■■■□□ 2.27
SHKBP1Q8TBC3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SHKBP1Q8TBC3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.25■■■□□ 2.27
SHKBP1Q8TBC3 AL391121.1-201ENST00000607967 1349 ntBASIC29.24■■■□□ 2.27
SHKBP1Q8TBC3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SHKBP1Q8TBC3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SHKBP1Q8TBC3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
SHKBP1Q8TBC3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SHKBP1Q8TBC3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SHKBP1Q8TBC3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SHKBP1Q8TBC3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SHKBP1Q8TBC3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SHKBP1Q8TBC3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SHKBP1Q8TBC3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.14■■■□□ 2.26
SHKBP1Q8TBC3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SHKBP1Q8TBC3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
SHKBP1Q8TBC3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.09■■■□□ 2.25
SHKBP1Q8TBC3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
SHKBP1Q8TBC3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.08■■■□□ 2.25
SHKBP1Q8TBC3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.08■■■□□ 2.25
SHKBP1Q8TBC3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.08■■■□□ 2.25
SHKBP1Q8TBC3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SHKBP1Q8TBC3 AL162393.1-201ENST00000437852 946 ntBASIC29.06■■■□□ 2.24
SHKBP1Q8TBC3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.05■■■□□ 2.24
SHKBP1Q8TBC3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.03■■■□□ 2.24
SHKBP1Q8TBC3 AP006261.1-201ENST00000584783 668 ntBASIC29.01■■■□□ 2.23
SHKBP1Q8TBC3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29■■■□□ 2.23
SHKBP1Q8TBC3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29■■■□□ 2.23
SHKBP1Q8TBC3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29■■■□□ 2.23
SHKBP1Q8TBC3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SHKBP1Q8TBC3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SHKBP1Q8TBC3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SHKBP1Q8TBC3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
SHKBP1Q8TBC3 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.97■■■□□ 2.23
SHKBP1Q8TBC3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SHKBP1Q8TBC3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.96■■■□□ 2.23
SHKBP1Q8TBC3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SHKBP1Q8TBC3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SHKBP1Q8TBC3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHKBP1Q8TBC3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHKBP1Q8TBC3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.92■■■□□ 2.22
SHKBP1Q8TBC3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
SHKBP1Q8TBC3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SHKBP1Q8TBC3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SHKBP1Q8TBC3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.88■■■□□ 2.21
SHKBP1Q8TBC3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SHKBP1Q8TBC3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SHKBP1Q8TBC3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SHKBP1Q8TBC3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.83■■■□□ 2.21
SHKBP1Q8TBC3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.81■■■□□ 2.2
SHKBP1Q8TBC3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.8■■■□□ 2.2
SHKBP1Q8TBC3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SHKBP1Q8TBC3 MIR3665-201ENST00000578708 105 ntBASIC28.8■■■□□ 2.2
SHKBP1Q8TBC3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
SHKBP1Q8TBC3 MIR762-201ENST00000390236 83 ntBASIC28.76■■■□□ 2.19
SHKBP1Q8TBC3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.76■■■□□ 2.19
SHKBP1Q8TBC3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SHKBP1Q8TBC3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SHKBP1Q8TBC3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SHKBP1Q8TBC3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SHKBP1Q8TBC3 DUX4L28-201ENST00000623687 678 ntBASIC28.75■■■□□ 2.19
SHKBP1Q8TBC3 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.75■■■□□ 2.19
SHKBP1Q8TBC3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SHKBP1Q8TBC3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
SHKBP1Q8TBC3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SHKBP1Q8TBC3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SHKBP1Q8TBC3 AC087741.3-201ENST00000624270 1347 ntBASIC28.7■■■□□ 2.19
SHKBP1Q8TBC3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SHKBP1Q8TBC3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHKBP1Q8TBC3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SHKBP1Q8TBC3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.69■■■□□ 2.18
SHKBP1Q8TBC3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.67■■■□□ 2.18
SHKBP1Q8TBC3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SHKBP1Q8TBC3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.67■■■□□ 2.18
SHKBP1Q8TBC3 WASH5P-204ENST00000632292 975 ntBASIC28.67■■■□□ 2.18
SHKBP1Q8TBC3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
SHKBP1Q8TBC3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SHKBP1Q8TBC3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.65■■■□□ 2.18
SHKBP1Q8TBC3 AC005559.1-201ENST00000589661 871 ntBASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms