Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC168Q8NDH2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC168Q8NDH2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.22■■□□□ 1.47
CCDC168Q8NDH2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC168Q8NDH2 AC087741.3-201ENST00000624270 1347 ntBASIC24.18■■□□□ 1.46
CCDC168Q8NDH2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC168Q8NDH2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.15■■□□□ 1.46
CCDC168Q8NDH2 AC044849.2-201ENST00000606596 710 ntBASIC24.13■■□□□ 1.45
CCDC168Q8NDH2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.13■■□□□ 1.45
CCDC168Q8NDH2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CCDC168Q8NDH2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CCDC168Q8NDH2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.09■■□□□ 1.45
CCDC168Q8NDH2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.09■■□□□ 1.45
CCDC168Q8NDH2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC168Q8NDH2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC168Q8NDH2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.06■■□□□ 1.44
CCDC168Q8NDH2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC168Q8NDH2 DUX4L28-201ENST00000623687 678 ntBASIC24.05■■□□□ 1.44
CCDC168Q8NDH2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CCDC168Q8NDH2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
CCDC168Q8NDH2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.04■■□□□ 1.44
CCDC168Q8NDH2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
CCDC168Q8NDH2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.03■■□□□ 1.44
CCDC168Q8NDH2 MIR4449-201ENST00000578365 66 ntBASIC24.03■■□□□ 1.44
CCDC168Q8NDH2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.02■■□□□ 1.44
CCDC168Q8NDH2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.02■■□□□ 1.44
CCDC168Q8NDH2 AC145285.7-201ENST00000614819 1539 ntBASIC24.02■■□□□ 1.44
CCDC168Q8NDH2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
CCDC168Q8NDH2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CCDC168Q8NDH2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24■■□□□ 1.43
CCDC168Q8NDH2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC168Q8NDH2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
CCDC168Q8NDH2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC168Q8NDH2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC168Q8NDH2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC168Q8NDH2 MIR762-201ENST00000390236 83 ntBASIC23.97■■□□□ 1.43
CCDC168Q8NDH2 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.95■■□□□ 1.43
CCDC168Q8NDH2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC168Q8NDH2 AL133380.1-201ENST00000506013 324 ntBASIC23.95■■□□□ 1.42
CCDC168Q8NDH2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC168Q8NDH2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CCDC168Q8NDH2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC23.93■■□□□ 1.42
CCDC168Q8NDH2 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC168Q8NDH2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC168Q8NDH2 AC005559.1-201ENST00000589661 871 ntBASIC23.92■■□□□ 1.42
CCDC168Q8NDH2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC168Q8NDH2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.91■■□□□ 1.42
CCDC168Q8NDH2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC168Q8NDH2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC168Q8NDH2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC168Q8NDH2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC23.89■■□□□ 1.42
CCDC168Q8NDH2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC168Q8NDH2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CCDC168Q8NDH2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC168Q8NDH2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.86■■□□□ 1.41
CCDC168Q8NDH2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC168Q8NDH2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC168Q8NDH2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC168Q8NDH2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC168Q8NDH2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC168Q8NDH2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC168Q8NDH2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC168Q8NDH2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCDC168Q8NDH2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.79■■□□□ 1.4
CCDC168Q8NDH2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC168Q8NDH2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC168Q8NDH2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC168Q8NDH2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC168Q8NDH2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC168Q8NDH2 ZNRF2P2-203ENST00000454624 420 ntBASIC23.76■■□□□ 1.39
CCDC168Q8NDH2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC168Q8NDH2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC168Q8NDH2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.75■■□□□ 1.39
CCDC168Q8NDH2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC168Q8NDH2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC168Q8NDH2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC168Q8NDH2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC168Q8NDH2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CCDC168Q8NDH2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC168Q8NDH2 MIR639-201ENST00000384974 98 ntBASIC23.72■■□□□ 1.39
CCDC168Q8NDH2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC168Q8NDH2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC168Q8NDH2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CCDC168Q8NDH2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC168Q8NDH2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC168Q8NDH2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC168Q8NDH2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC168Q8NDH2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC168Q8NDH2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.64■■□□□ 1.38
CCDC168Q8NDH2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CCDC168Q8NDH2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC168Q8NDH2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC168Q8NDH2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC168Q8NDH2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC168Q8NDH2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC168Q8NDH2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC23.58■■□□□ 1.37
CCDC168Q8NDH2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC168Q8NDH2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC168Q8NDH2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC168Q8NDH2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms