Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.24■■□□□ 1.95
EFCAB3Q8N7B9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.24■■□□□ 1.95
EFCAB3Q8N7B9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
EFCAB3Q8N7B9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
EFCAB3Q8N7B9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.22■■□□□ 1.95
EFCAB3Q8N7B9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
EFCAB3Q8N7B9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.18■■□□□ 1.94
EFCAB3Q8N7B9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
EFCAB3Q8N7B9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
EFCAB3Q8N7B9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
EFCAB3Q8N7B9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
EFCAB3Q8N7B9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.15■■□□□ 1.94
EFCAB3Q8N7B9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
EFCAB3Q8N7B9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
EFCAB3Q8N7B9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
EFCAB3Q8N7B9 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
EFCAB3Q8N7B9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
EFCAB3Q8N7B9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
EFCAB3Q8N7B9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.13■■□□□ 1.93
EFCAB3Q8N7B9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
EFCAB3Q8N7B9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
EFCAB3Q8N7B9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.09■■□□□ 1.93
EFCAB3Q8N7B9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
EFCAB3Q8N7B9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
EFCAB3Q8N7B9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
EFCAB3Q8N7B9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
EFCAB3Q8N7B9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.06■■□□□ 1.92
EFCAB3Q8N7B9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
EFCAB3Q8N7B9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
EFCAB3Q8N7B9 DYNLL1-208ENST00000550178 581 ntBASIC27.05■■□□□ 1.92
EFCAB3Q8N7B9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
EFCAB3Q8N7B9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
EFCAB3Q8N7B9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
EFCAB3Q8N7B9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.02■■□□□ 1.92
EFCAB3Q8N7B9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
EFCAB3Q8N7B9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
EFCAB3Q8N7B9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
EFCAB3Q8N7B9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
EFCAB3Q8N7B9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
EFCAB3Q8N7B9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
EFCAB3Q8N7B9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.99■■□□□ 1.91
EFCAB3Q8N7B9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.98■■□□□ 1.91
EFCAB3Q8N7B9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
EFCAB3Q8N7B9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
EFCAB3Q8N7B9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
EFCAB3Q8N7B9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
EFCAB3Q8N7B9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
EFCAB3Q8N7B9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
EFCAB3Q8N7B9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
EFCAB3Q8N7B9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
EFCAB3Q8N7B9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
EFCAB3Q8N7B9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
EFCAB3Q8N7B9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
EFCAB3Q8N7B9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.9■■□□□ 1.9
EFCAB3Q8N7B9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
EFCAB3Q8N7B9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
EFCAB3Q8N7B9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.87■■□□□ 1.89
EFCAB3Q8N7B9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
EFCAB3Q8N7B9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
EFCAB3Q8N7B9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
EFCAB3Q8N7B9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
EFCAB3Q8N7B9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
EFCAB3Q8N7B9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EFCAB3Q8N7B9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
EFCAB3Q8N7B9 ABCB10P1-201ENST00000614297 2181 ntBASIC26.81■■□□□ 1.88
EFCAB3Q8N7B9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
EFCAB3Q8N7B9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.81■■□□□ 1.88
EFCAB3Q8N7B9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.81■■□□□ 1.88
EFCAB3Q8N7B9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
EFCAB3Q8N7B9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
EFCAB3Q8N7B9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.8■■□□□ 1.88
EFCAB3Q8N7B9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.8■■□□□ 1.88
EFCAB3Q8N7B9 AL031258.1-201ENST00000623562 325 ntBASIC26.79■■□□□ 1.88
EFCAB3Q8N7B9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
EFCAB3Q8N7B9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.78■■□□□ 1.88
EFCAB3Q8N7B9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
EFCAB3Q8N7B9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
EFCAB3Q8N7B9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.76■■□□□ 1.87
EFCAB3Q8N7B9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
EFCAB3Q8N7B9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
EFCAB3Q8N7B9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
EFCAB3Q8N7B9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
EFCAB3Q8N7B9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
EFCAB3Q8N7B9 RARRES2P7-201ENST00000567349 469 ntBASIC26.73■■□□□ 1.87
EFCAB3Q8N7B9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
EFCAB3Q8N7B9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
EFCAB3Q8N7B9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
EFCAB3Q8N7B9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.7■■□□□ 1.86
EFCAB3Q8N7B9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.69■■□□□ 1.86
EFCAB3Q8N7B9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
EFCAB3Q8N7B9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.69■■□□□ 1.86
EFCAB3Q8N7B9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
EFCAB3Q8N7B9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.68■■□□□ 1.86
EFCAB3Q8N7B9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.68■■□□□ 1.86
EFCAB3Q8N7B9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
EFCAB3Q8N7B9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.66■■□□□ 1.86
EFCAB3Q8N7B9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
EFCAB3Q8N7B9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.65■■□□□ 1.86
EFCAB3Q8N7B9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.64■■□□□ 1.85
EFCAB3Q8N7B9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms