Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC40.11■■■■■ 4.01
XRN1Q8IZH2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
XRN1Q8IZH2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC40.09■■■■■ 4.01
XRN1Q8IZH2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
XRN1Q8IZH2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC40.03■■■■■ 4
XRN1Q8IZH2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC40.03■■■■■ 4
XRN1Q8IZH2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC40.03■■■■■ 4
XRN1Q8IZH2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC40.02■■■■■ 4
XRN1Q8IZH2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC40.01■■■■■ 4
XRN1Q8IZH2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC40.01■■■■■ 4
XRN1Q8IZH2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
XRN1Q8IZH2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
XRN1Q8IZH2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC39.91■■■■□ 3.98
XRN1Q8IZH2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC39.89■■■■□ 3.98
XRN1Q8IZH2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC39.88■■■■□ 3.97
XRN1Q8IZH2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
XRN1Q8IZH2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC39.87■■■■□ 3.97
XRN1Q8IZH2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
XRN1Q8IZH2 DUX4L28-201ENST00000623687 678 ntBASIC39.84■■■■□ 3.97
XRN1Q8IZH2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC39.83■■■■□ 3.97
XRN1Q8IZH2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC39.82■■■■□ 3.97
XRN1Q8IZH2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC39.78■■■■□ 3.96
XRN1Q8IZH2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC39.78■■■■□ 3.96
XRN1Q8IZH2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
XRN1Q8IZH2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.76■■■■□ 3.96
XRN1Q8IZH2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
XRN1Q8IZH2 AC087741.3-201ENST00000624270 1347 ntBASIC39.75■■■■□ 3.95
XRN1Q8IZH2 MIR3665-201ENST00000578708 105 ntBASIC39.74■■■■□ 3.95
XRN1Q8IZH2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
XRN1Q8IZH2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
XRN1Q8IZH2 MIR7108-201ENST00000614319 87 ntBASIC39.71■■■■□ 3.95
XRN1Q8IZH2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
XRN1Q8IZH2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
XRN1Q8IZH2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
XRN1Q8IZH2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
XRN1Q8IZH2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC39.66■■■■□ 3.94
XRN1Q8IZH2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC39.64■■■■□ 3.94
XRN1Q8IZH2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC39.64■■■■□ 3.94
XRN1Q8IZH2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC39.6■■■■□ 3.93
XRN1Q8IZH2 AC044849.2-201ENST00000606596 710 ntBASIC39.6■■■■□ 3.93
XRN1Q8IZH2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
XRN1Q8IZH2 ABHD17AP4-201ENST00000411545 909 ntBASIC39.59■■■■□ 3.93
XRN1Q8IZH2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
XRN1Q8IZH2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
XRN1Q8IZH2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
XRN1Q8IZH2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC39.54■■■■□ 3.92
XRN1Q8IZH2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC39.51■■■■□ 3.92
XRN1Q8IZH2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC39.51■■■■□ 3.91
XRN1Q8IZH2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
XRN1Q8IZH2 MIR762-201ENST00000390236 83 ntBASIC39.48■■■■□ 3.91
XRN1Q8IZH2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC39.47■■■■□ 3.91
XRN1Q8IZH2 AC005559.1-201ENST00000589661 871 ntBASIC39.46■■■■□ 3.91
XRN1Q8IZH2 CHML-205ENST00000638160 705 ntTSL 3 BASIC39.44■■■■□ 3.9
XRN1Q8IZH2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.43■■■■□ 3.9
XRN1Q8IZH2 HLA-V-202ENST00000446817 847 ntBASIC39.43■■■■□ 3.9
XRN1Q8IZH2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC39.42■■■■□ 3.9
XRN1Q8IZH2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC39.4■■■■□ 3.9
XRN1Q8IZH2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC39.36■■■■□ 3.89
XRN1Q8IZH2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.36■■■■□ 3.89
XRN1Q8IZH2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.35■■■■□ 3.89
XRN1Q8IZH2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC39.34■■■■□ 3.89
XRN1Q8IZH2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC39.32■■■■□ 3.89
XRN1Q8IZH2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
XRN1Q8IZH2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC39.31■■■■□ 3.88
XRN1Q8IZH2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
XRN1Q8IZH2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC39.3■■■■□ 3.88
XRN1Q8IZH2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC39.27■■■■□ 3.88
XRN1Q8IZH2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.26■■■■□ 3.87
XRN1Q8IZH2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC39.25■■■■□ 3.87
XRN1Q8IZH2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.24■■■■□ 3.87
XRN1Q8IZH2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC39.22■■■■□ 3.87
XRN1Q8IZH2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
XRN1Q8IZH2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
XRN1Q8IZH2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
XRN1Q8IZH2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
XRN1Q8IZH2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC39.17■■■■□ 3.86
XRN1Q8IZH2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.14■■■■□ 3.86
XRN1Q8IZH2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC39.14■■■■□ 3.86
XRN1Q8IZH2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
XRN1Q8IZH2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
XRN1Q8IZH2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
XRN1Q8IZH2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
XRN1Q8IZH2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
XRN1Q8IZH2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
XRN1Q8IZH2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC39.05■■■■□ 3.84
XRN1Q8IZH2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.04■■■■□ 3.84
XRN1Q8IZH2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.04■■■■□ 3.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms