Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFE4Q86UQ8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFE4Q86UQ8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFE4Q86UQ8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFE4Q86UQ8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NFE4Q86UQ8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NFE4Q86UQ8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NFE4Q86UQ8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NFE4Q86UQ8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.58■□□□□ 0.72
NFE4Q86UQ8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NFE4Q86UQ8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NFE4Q86UQ8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NFE4Q86UQ8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFE4Q86UQ8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFE4Q86UQ8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.57■□□□□ 0.72
NFE4Q86UQ8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NFE4Q86UQ8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NFE4Q86UQ8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFE4Q86UQ8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NFE4Q86UQ8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFE4Q86UQ8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NFE4Q86UQ8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.55■□□□□ 0.72
NFE4Q86UQ8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.54■□□□□ 0.72
NFE4Q86UQ8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NFE4Q86UQ8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NFE4Q86UQ8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
NFE4Q86UQ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NFE4Q86UQ8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.51■□□□□ 0.71
NFE4Q86UQ8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NFE4Q86UQ8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFE4Q86UQ8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NFE4Q86UQ8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.48■□□□□ 0.71
NFE4Q86UQ8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NFE4Q86UQ8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.48■□□□□ 0.71
NFE4Q86UQ8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NFE4Q86UQ8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFE4Q86UQ8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.47■□□□□ 0.71
NFE4Q86UQ8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NFE4Q86UQ8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NFE4Q86UQ8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFE4Q86UQ8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.44■□□□□ 0.7
NFE4Q86UQ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFE4Q86UQ8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NFE4Q86UQ8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.43■□□□□ 0.7
NFE4Q86UQ8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFE4Q86UQ8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.43■□□□□ 0.7
NFE4Q86UQ8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NFE4Q86UQ8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NFE4Q86UQ8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFE4Q86UQ8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NFE4Q86UQ8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NFE4Q86UQ8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NFE4Q86UQ8 DYNLL1-208ENST00000550178 581 ntBASIC19.41■□□□□ 0.7
NFE4Q86UQ8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.4■□□□□ 0.7
NFE4Q86UQ8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NFE4Q86UQ8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFE4Q86UQ8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NFE4Q86UQ8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NFE4Q86UQ8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NFE4Q86UQ8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NFE4Q86UQ8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFE4Q86UQ8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFE4Q86UQ8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFE4Q86UQ8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFE4Q86UQ8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NFE4Q86UQ8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
NFE4Q86UQ8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NFE4Q86UQ8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.34■□□□□ 0.69
NFE4Q86UQ8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFE4Q86UQ8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NFE4Q86UQ8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.33■□□□□ 0.68
NFE4Q86UQ8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NFE4Q86UQ8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFE4Q86UQ8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFE4Q86UQ8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFE4Q86UQ8 ABCB10P1-201ENST00000614297 2181 ntBASIC19.31■□□□□ 0.68
NFE4Q86UQ8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NFE4Q86UQ8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFE4Q86UQ8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFE4Q86UQ8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFE4Q86UQ8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFE4Q86UQ8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFE4Q86UQ8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NFE4Q86UQ8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFE4Q86UQ8 ABCB10P3-201ENST00000561950 2166 ntBASIC19.27■□□□□ 0.68
NFE4Q86UQ8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.26■□□□□ 0.67
NFE4Q86UQ8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFE4Q86UQ8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFE4Q86UQ8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NFE4Q86UQ8 AL031258.1-201ENST00000623562 325 ntBASIC19.25■□□□□ 0.67
NFE4Q86UQ8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NFE4Q86UQ8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFE4Q86UQ8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFE4Q86UQ8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NFE4Q86UQ8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.24■□□□□ 0.67
NFE4Q86UQ8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.24■□□□□ 0.67
NFE4Q86UQ8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NFE4Q86UQ8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NFE4Q86UQ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NFE4Q86UQ8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms