Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COLCA1Q6ZS62 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.07■■□□□ 1.44
COLCA1Q6ZS62 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.07■■□□□ 1.44
COLCA1Q6ZS62 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COLCA1Q6ZS62 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.05■■□□□ 1.44
COLCA1Q6ZS62 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COLCA1Q6ZS62 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COLCA1Q6ZS62 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
COLCA1Q6ZS62 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.03■■□□□ 1.44
COLCA1Q6ZS62 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.02■■□□□ 1.44
COLCA1Q6ZS62 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.01■■□□□ 1.43
COLCA1Q6ZS62 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
COLCA1Q6ZS62 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
COLCA1Q6ZS62 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.99■■□□□ 1.43
COLCA1Q6ZS62 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
COLCA1Q6ZS62 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
COLCA1Q6ZS62 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.97■■□□□ 1.43
COLCA1Q6ZS62 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COLCA1Q6ZS62 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
COLCA1Q6ZS62 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
COLCA1Q6ZS62 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.93■■□□□ 1.42
COLCA1Q6ZS62 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COLCA1Q6ZS62 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COLCA1Q6ZS62 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COLCA1Q6ZS62 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COLCA1Q6ZS62 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COLCA1Q6ZS62 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.88■■□□□ 1.41
COLCA1Q6ZS62 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COLCA1Q6ZS62 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COLCA1Q6ZS62 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
COLCA1Q6ZS62 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COLCA1Q6ZS62 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COLCA1Q6ZS62 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.84■■□□□ 1.41
COLCA1Q6ZS62 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 AC120057.4-201ENST00000624722 1615 ntBASIC23.83■■□□□ 1.41
COLCA1Q6ZS62 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COLCA1Q6ZS62 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COLCA1Q6ZS62 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COLCA1Q6ZS62 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.79■■□□□ 1.4
COLCA1Q6ZS62 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
COLCA1Q6ZS62 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COLCA1Q6ZS62 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COLCA1Q6ZS62 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COLCA1Q6ZS62 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COLCA1Q6ZS62 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.74■■□□□ 1.39
COLCA1Q6ZS62 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COLCA1Q6ZS62 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
COLCA1Q6ZS62 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COLCA1Q6ZS62 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COLCA1Q6ZS62 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COLCA1Q6ZS62 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COLCA1Q6ZS62 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
COLCA1Q6ZS62 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 KLF16-203ENST00000592313 508 ntTSL 3 BASIC23.68■■□□□ 1.38
COLCA1Q6ZS62 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.67■■□□□ 1.38
COLCA1Q6ZS62 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COLCA1Q6ZS62 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
COLCA1Q6ZS62 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COLCA1Q6ZS62 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.62■■□□□ 1.37
COLCA1Q6ZS62 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COLCA1Q6ZS62 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC23.61■■□□□ 1.37
COLCA1Q6ZS62 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.6■■□□□ 1.37
COLCA1Q6ZS62 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.6■■□□□ 1.37
COLCA1Q6ZS62 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COLCA1Q6ZS62 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COLCA1Q6ZS62 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COLCA1Q6ZS62 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COLCA1Q6ZS62 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.56■■□□□ 1.36
COLCA1Q6ZS62 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
COLCA1Q6ZS62 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COLCA1Q6ZS62 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COLCA1Q6ZS62 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 AL133380.1-201ENST00000506013 324 ntBASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COLCA1Q6ZS62 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.51■■□□□ 1.35
COLCA1Q6ZS62 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms