Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDPF1Q6NVV7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CDPF1Q6NVV7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CDPF1Q6NVV7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDPF1Q6NVV7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDPF1Q6NVV7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDPF1Q6NVV7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDPF1Q6NVV7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.23■□□□□ 0.99
CDPF1Q6NVV7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDPF1Q6NVV7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.21■□□□□ 0.99
CDPF1Q6NVV7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDPF1Q6NVV7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDPF1Q6NVV7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDPF1Q6NVV7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDPF1Q6NVV7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
CDPF1Q6NVV7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDPF1Q6NVV7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDPF1Q6NVV7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDPF1Q6NVV7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDPF1Q6NVV7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDPF1Q6NVV7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CDPF1Q6NVV7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDPF1Q6NVV7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDPF1Q6NVV7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDPF1Q6NVV7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDPF1Q6NVV7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.09■□□□□ 0.97
CDPF1Q6NVV7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDPF1Q6NVV7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDPF1Q6NVV7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDPF1Q6NVV7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDPF1Q6NVV7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDPF1Q6NVV7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDPF1Q6NVV7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDPF1Q6NVV7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDPF1Q6NVV7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDPF1Q6NVV7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.03■□□□□ 0.96
CDPF1Q6NVV7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.03■□□□□ 0.96
CDPF1Q6NVV7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.03■□□□□ 0.96
CDPF1Q6NVV7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDPF1Q6NVV7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDPF1Q6NVV7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDPF1Q6NVV7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CDPF1Q6NVV7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDPF1Q6NVV7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
CDPF1Q6NVV7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDPF1Q6NVV7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDPF1Q6NVV7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDPF1Q6NVV7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDPF1Q6NVV7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDPF1Q6NVV7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDPF1Q6NVV7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.91■□□□□ 0.94
CDPF1Q6NVV7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDPF1Q6NVV7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDPF1Q6NVV7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDPF1Q6NVV7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDPF1Q6NVV7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.88■□□□□ 0.93
CDPF1Q6NVV7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDPF1Q6NVV7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDPF1Q6NVV7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDPF1Q6NVV7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDPF1Q6NVV7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDPF1Q6NVV7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.82■□□□□ 0.92
CDPF1Q6NVV7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDPF1Q6NVV7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.81■□□□□ 0.92
CDPF1Q6NVV7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDPF1Q6NVV7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDPF1Q6NVV7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDPF1Q6NVV7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDPF1Q6NVV7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDPF1Q6NVV7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDPF1Q6NVV7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.78■□□□□ 0.92
CDPF1Q6NVV7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDPF1Q6NVV7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDPF1Q6NVV7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDPF1Q6NVV7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDPF1Q6NVV7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.76■□□□□ 0.91
CDPF1Q6NVV7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDPF1Q6NVV7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDPF1Q6NVV7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.74■□□□□ 0.91
CDPF1Q6NVV7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDPF1Q6NVV7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.73■□□□□ 0.91
CDPF1Q6NVV7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDPF1Q6NVV7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDPF1Q6NVV7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.72■□□□□ 0.91
CDPF1Q6NVV7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDPF1Q6NVV7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDPF1Q6NVV7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDPF1Q6NVV7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDPF1Q6NVV7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDPF1Q6NVV7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDPF1Q6NVV7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDPF1Q6NVV7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDPF1Q6NVV7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDPF1Q6NVV7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CDPF1Q6NVV7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms