Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL031258.1-201ENST00000623562 325 ntBASIC31.67■■■□□ 2.66
LONRF3Q496Y0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
LONRF3Q496Y0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
LONRF3Q496Y0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.63■■■□□ 2.65
LONRF3Q496Y0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
LONRF3Q496Y0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
LONRF3Q496Y0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LONRF3Q496Y0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.59■■■□□ 2.65
LONRF3Q496Y0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.59■■■□□ 2.65
LONRF3Q496Y0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.55■■■□□ 2.64
LONRF3Q496Y0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
LONRF3Q496Y0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
LONRF3Q496Y0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.55■■■□□ 2.64
LONRF3Q496Y0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
LONRF3Q496Y0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
LONRF3Q496Y0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.53■■■□□ 2.64
LONRF3Q496Y0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
LONRF3Q496Y0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
LONRF3Q496Y0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LONRF3Q496Y0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.49■■■□□ 2.63
LONRF3Q496Y0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.49■■■□□ 2.63
LONRF3Q496Y0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
LONRF3Q496Y0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
LONRF3Q496Y0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.47■■■□□ 2.63
LONRF3Q496Y0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
LONRF3Q496Y0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LONRF3Q496Y0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
LONRF3Q496Y0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
LONRF3Q496Y0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.45■■■□□ 2.63
LONRF3Q496Y0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.45■■■□□ 2.63
LONRF3Q496Y0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
LONRF3Q496Y0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
LONRF3Q496Y0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
LONRF3Q496Y0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.39■■■□□ 2.62
LONRF3Q496Y0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
LONRF3Q496Y0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.38■■■□□ 2.61
LONRF3Q496Y0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
LONRF3Q496Y0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
LONRF3Q496Y0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
LONRF3Q496Y0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.35■■■□□ 2.61
LONRF3Q496Y0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LONRF3Q496Y0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
LONRF3Q496Y0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
LONRF3Q496Y0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LONRF3Q496Y0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
LONRF3Q496Y0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
LONRF3Q496Y0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LONRF3Q496Y0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.29■■■□□ 2.6
LONRF3Q496Y0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LONRF3Q496Y0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LONRF3Q496Y0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LONRF3Q496Y0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LONRF3Q496Y0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
LONRF3Q496Y0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.25■■■□□ 2.59
LONRF3Q496Y0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.24■■■□□ 2.59
LONRF3Q496Y0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LONRF3Q496Y0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.24■■■□□ 2.59
LONRF3Q496Y0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LONRF3Q496Y0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.23■■■□□ 2.59
LONRF3Q496Y0 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.23■■■□□ 2.59
LONRF3Q496Y0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
LONRF3Q496Y0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
LONRF3Q496Y0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.22■■■□□ 2.59
LONRF3Q496Y0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.21■■■□□ 2.59
LONRF3Q496Y0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.2■■■□□ 2.59
LONRF3Q496Y0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.19■■■□□ 2.58
LONRF3Q496Y0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
LONRF3Q496Y0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LONRF3Q496Y0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LONRF3Q496Y0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
LONRF3Q496Y0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LONRF3Q496Y0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LONRF3Q496Y0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.16■■■□□ 2.58
LONRF3Q496Y0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LONRF3Q496Y0 AC120057.4-201ENST00000624722 1615 ntBASIC31.13■■■□□ 2.57
LONRF3Q496Y0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
LONRF3Q496Y0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
LONRF3Q496Y0 RARRES2P7-201ENST00000567349 469 ntBASIC31.1■■■□□ 2.57
LONRF3Q496Y0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LONRF3Q496Y0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.07■■■□□ 2.56
LONRF3Q496Y0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
LONRF3Q496Y0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LONRF3Q496Y0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.04■■■□□ 2.56
LONRF3Q496Y0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LONRF3Q496Y0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LONRF3Q496Y0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.03■■■□□ 2.56
LONRF3Q496Y0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
LONRF3Q496Y0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.02■■■□□ 2.56
LONRF3Q496Y0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LONRF3Q496Y0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
LONRF3Q496Y0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.01■■■□□ 2.56
LONRF3Q496Y0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
LONRF3Q496Y0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.01■■■□□ 2.55
LONRF3Q496Y0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.01■■■□□ 2.55
LONRF3Q496Y0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.99■■■□□ 2.55
LONRF3Q496Y0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
LONRF3Q496Y0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LONRF3Q496Y0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LONRF3Q496Y0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.96■■■□□ 2.55
LONRF3Q496Y0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms