Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
LBX1P52954 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC33.43■■■□□ 2.94
LBX1P52954 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC33.43■■■□□ 2.94
LBX1P52954 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.42■■■□□ 2.94
LBX1P52954 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC33.41■■■□□ 2.94
LBX1P52954 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.41■■■□□ 2.94
LBX1P52954 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.4■■■□□ 2.94
LBX1P52954 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
LBX1P52954 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.36■■■□□ 2.93
LBX1P52954 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
LBX1P52954 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
LBX1P52954 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.32■■■□□ 2.92
LBX1P52954 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
LBX1P52954 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
LBX1P52954 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
LBX1P52954 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
LBX1P52954 ZNRF2P2-203ENST00000454624 420 ntBASIC33.28■■■□□ 2.92
LBX1P52954 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
LBX1P52954 AC044849.2-201ENST00000606596 710 ntBASIC33.27■■■□□ 2.92
LBX1P52954 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
LBX1P52954 DUX4L28-201ENST00000623687 678 ntBASIC33.24■■■□□ 2.91
LBX1P52954 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC33.18■■■□□ 2.9
LBX1P52954 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC33.18■■■□□ 2.9
LBX1P52954 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.16■■■□□ 2.9
LBX1P52954 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
LBX1P52954 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.14■■■□□ 2.9
LBX1P52954 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
LBX1P52954 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC33.12■■■□□ 2.89
LBX1P52954 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
LBX1P52954 MIR4449-201ENST00000578365 66 ntBASIC33.12■■■□□ 2.89
LBX1P52954 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
LBX1P52954 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
LBX1P52954 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.09■■■□□ 2.89
LBX1P52954 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
LBX1P52954 AL133380.1-201ENST00000506013 324 ntBASIC33.05■■■□□ 2.88
LBX1P52954 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.99■■■□□ 2.87
LBX1P52954 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
LBX1P52954 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.97■■■□□ 2.87
LBX1P52954 HSD17B1P1-201ENST00000590052 955 ntBASIC32.96■■■□□ 2.87
LBX1P52954 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
LBX1P52954 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.94■■■□□ 2.86
LBX1P52954 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
LBX1P52954 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
LBX1P52954 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.93■■■□□ 2.86
LBX1P52954 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.93■■■□□ 2.86
LBX1P52954 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LBX1P52954 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.92■■■□□ 2.86
LBX1P52954 AC005559.1-201ENST00000589661 871 ntBASIC32.91■■■□□ 2.86
LBX1P52954 MIR762-201ENST00000390236 83 ntBASIC32.9■■■□□ 2.86
LBX1P52954 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.89■■■□□ 2.86
LBX1P52954 MIR639-201ENST00000384974 98 ntBASIC32.87■■■□□ 2.85
LBX1P52954 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
LBX1P52954 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.87■■■□□ 2.85
LBX1P52954 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
LBX1P52954 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
LBX1P52954 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
LBX1P52954 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
LBX1P52954 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
LBX1P52954 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
LBX1P52954 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.79■■■□□ 2.84
LBX1P52954 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.79■■■□□ 2.84
LBX1P52954 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
LBX1P52954 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
LBX1P52954 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.76■■■□□ 2.83
LBX1P52954 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
LBX1P52954 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
LBX1P52954 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
LBX1P52954 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
LBX1P52954 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.7■■■□□ 2.83
LBX1P52954 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.69■■■□□ 2.82
LBX1P52954 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.69■■■□□ 2.82
LBX1P52954 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.67■■■□□ 2.82
LBX1P52954 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC32.67■■■□□ 2.82
LBX1P52954 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
LBX1P52954 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
LBX1P52954 AC145285.7-201ENST00000614819 1539 ntBASIC32.66■■■□□ 2.82
LBX1P52954 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.6■■■□□ 2.81
LBX1P52954 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
LBX1P52954 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.58■■■□□ 2.81
LBX1P52954 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LBX1P52954 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.57■■■□□ 2.8
LBX1P52954 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
LBX1P52954 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
LBX1P52954 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
LBX1P52954 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.51■■■□□ 2.79
LBX1P52954 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
LBX1P52954 DUX4L29-201ENST00000425409 679 ntBASIC32.51■■■□□ 2.79
LBX1P52954 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.51■■■□□ 2.79
LBX1P52954 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LBX1P52954 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.49■■■□□ 2.79
LBX1P52954 AC016575.1-201ENST00000607026 382 ntBASIC32.49■■■□□ 2.79
LBX1P52954 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.47■■■□□ 2.79
LBX1P52954 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
LBX1P52954 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
LBX1P52954 MIR3648-2-201ENST00000581792 180 ntBASIC32.43■■■□□ 2.78
LBX1P52954 MIR3648-1-201ENST00000615959 180 ntBASIC32.43■■■□□ 2.78
LBX1P52954 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
LBX1P52954 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
LBX1P52954 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.41■■■□□ 2.78
LBX1P52954 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms