Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.34■■■□□ 2.61
CCT6AP40227 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCT6AP40227 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.32■■■□□ 2.6
CCT6AP40227 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCT6AP40227 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CCT6AP40227 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CCT6AP40227 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCT6AP40227 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCT6AP40227 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCT6AP40227 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCT6AP40227 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.26■■■□□ 2.59
CCT6AP40227 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCT6AP40227 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.26■■■□□ 2.59
CCT6AP40227 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CCT6AP40227 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
CCT6AP40227 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CCT6AP40227 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCT6AP40227 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CCT6AP40227 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.23■■■□□ 2.59
CCT6AP40227 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCT6AP40227 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.22■■■□□ 2.59
CCT6AP40227 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCT6AP40227 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCT6AP40227 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.59
CCT6AP40227 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CCT6AP40227 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.18■■■□□ 2.58
CCT6AP40227 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.18■■■□□ 2.58
CCT6AP40227 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCT6AP40227 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCT6AP40227 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.17■■■□□ 2.58
CCT6AP40227 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.17■■■□□ 2.58
CCT6AP40227 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.16■■■□□ 2.58
CCT6AP40227 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CCT6AP40227 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CCT6AP40227 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.15■■■□□ 2.58
CCT6AP40227 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.14■■■□□ 2.58
CCT6AP40227 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCT6AP40227 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.12■■■□□ 2.57
CCT6AP40227 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCT6AP40227 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCT6AP40227 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCT6AP40227 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.07■■■□□ 2.56
CCT6AP40227 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.07■■■□□ 2.56
CCT6AP40227 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.06■■■□□ 2.56
CCT6AP40227 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCT6AP40227 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.06■■■□□ 2.56
CCT6AP40227 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.06■■■□□ 2.56
CCT6AP40227 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCT6AP40227 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.03■■■□□ 2.56
CCT6AP40227 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.03■■■□□ 2.56
CCT6AP40227 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCT6AP40227 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCT6AP40227 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCT6AP40227 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
CCT6AP40227 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CCT6AP40227 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.96■■■□□ 2.55
CCT6AP40227 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CCT6AP40227 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCT6AP40227 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.93■■■□□ 2.54
CCT6AP40227 RARRES2P7-201ENST00000567349 469 ntBASIC30.92■■■□□ 2.54
CCT6AP40227 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCT6AP40227 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.89■■■□□ 2.54
CCT6AP40227 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.88■■■□□ 2.53
CCT6AP40227 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCT6AP40227 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCT6AP40227 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
CCT6AP40227 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCT6AP40227 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
CCT6AP40227 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCT6AP40227 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.85■■■□□ 2.53
CCT6AP40227 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCT6AP40227 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCT6AP40227 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.83■■■□□ 2.53
CCT6AP40227 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCT6AP40227 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.82■■■□□ 2.52
CCT6AP40227 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCT6AP40227 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCT6AP40227 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCT6AP40227 AC120057.4-201ENST00000624722 1615 ntBASIC30.8■■■□□ 2.52
CCT6AP40227 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCT6AP40227 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.78■■■□□ 2.52
CCT6AP40227 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCT6AP40227 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCT6AP40227 SETD8P1-201ENST00000623146 1180 ntBASIC30.77■■■□□ 2.52
CCT6AP40227 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCT6AP40227 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCT6AP40227 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCT6AP40227 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCT6AP40227 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.74■■■□□ 2.51
CCT6AP40227 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCT6AP40227 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCT6AP40227 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCT6AP40227 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCT6AP40227 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.72■■■□□ 2.51
CCT6AP40227 AL133380.1-201ENST00000506013 324 ntBASIC30.72■■■□□ 2.51
CCT6AP40227 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CCT6AP40227 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCT6AP40227 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCT6AP40227 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCT6AP40227 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms