Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AL133380.1-201ENST00000506013 324 ntBASIC32.6■■■□□ 2.81
CTGFP29279 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
CTGFP29279 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CTGFP29279 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CTGFP29279 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.55■■■□□ 2.8
CTGFP29279 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CTGFP29279 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CTGFP29279 ABHD17AP4-201ENST00000411545 909 ntBASIC32.53■■■□□ 2.8
CTGFP29279 MIR7108-201ENST00000614319 87 ntBASIC32.52■■■□□ 2.8
CTGFP29279 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CTGFP29279 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
CTGFP29279 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CTGFP29279 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CTGFP29279 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CTGFP29279 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.46■■■□□ 2.79
CTGFP29279 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.46■■■□□ 2.79
CTGFP29279 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CTGFP29279 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CTGFP29279 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
CTGFP29279 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.41■■■□□ 2.78
CTGFP29279 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.41■■■□□ 2.78
CTGFP29279 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.4■■■□□ 2.78
CTGFP29279 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.4■■■□□ 2.78
CTGFP29279 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CTGFP29279 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.39■■■□□ 2.78
CTGFP29279 AC087741.3-201ENST00000624270 1347 ntBASIC32.37■■■□□ 2.77
CTGFP29279 MIR3665-201ENST00000578708 105 ntBASIC32.37■■■□□ 2.77
CTGFP29279 DUX4L28-201ENST00000623687 678 ntBASIC32.34■■■□□ 2.77
CTGFP29279 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.31■■■□□ 2.76
CTGFP29279 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CTGFP29279 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
CTGFP29279 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CTGFP29279 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CTGFP29279 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.26■■■□□ 2.75
CTGFP29279 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
CTGFP29279 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.25■■■□□ 2.75
CTGFP29279 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CTGFP29279 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
CTGFP29279 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CTGFP29279 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.21■■■□□ 2.75
CTGFP29279 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CTGFP29279 HLA-V-202ENST00000446817 847 ntBASIC32.17■■■□□ 2.74
CTGFP29279 MIR762-201ENST00000390236 83 ntBASIC32.16■■■□□ 2.74
CTGFP29279 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.15■■■□□ 2.74
CTGFP29279 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.15■■■□□ 2.74
CTGFP29279 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.15■■■□□ 2.74
CTGFP29279 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CTGFP29279 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.13■■■□□ 2.73
CTGFP29279 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.13■■■□□ 2.73
CTGFP29279 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.12■■■□□ 2.73
CTGFP29279 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.12■■■□□ 2.73
CTGFP29279 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
CTGFP29279 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CTGFP29279 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CTGFP29279 AC044849.2-201ENST00000606596 710 ntBASIC32.1■■■□□ 2.73
CTGFP29279 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CTGFP29279 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.08■■■□□ 2.73
CTGFP29279 AC005559.1-201ENST00000589661 871 ntBASIC32.05■■■□□ 2.72
CTGFP29279 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CTGFP29279 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.04■■■□□ 2.72
CTGFP29279 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CTGFP29279 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32■■■□□ 2.71
CTGFP29279 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CTGFP29279 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.98■■■□□ 2.71
CTGFP29279 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.98■■■□□ 2.71
CTGFP29279 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.96■■■□□ 2.71
CTGFP29279 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
CTGFP29279 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CTGFP29279 ZNRF2P2-203ENST00000454624 420 ntBASIC31.95■■■□□ 2.71
CTGFP29279 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CTGFP29279 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CTGFP29279 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.91■■■□□ 2.7
CTGFP29279 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.91■■■□□ 2.7
CTGFP29279 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.9■■■□□ 2.7
CTGFP29279 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.9■■■□□ 2.7
CTGFP29279 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.9■■■□□ 2.7
CTGFP29279 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CTGFP29279 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CTGFP29279 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.87■■■□□ 2.69
CTGFP29279 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CTGFP29279 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.86■■■□□ 2.69
CTGFP29279 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CTGFP29279 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CTGFP29279 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.84■■■□□ 2.69
CTGFP29279 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CTGFP29279 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.83■■■□□ 2.69
CTGFP29279 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CTGFP29279 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.82■■■□□ 2.68
CTGFP29279 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CTGFP29279 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.8■■■□□ 2.68
CTGFP29279 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CTGFP29279 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CTGFP29279 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CTGFP29279 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.76■■■□□ 2.67
CTGFP29279 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.76■■■□□ 2.67
CTGFP29279 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CTGFP29279 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CTGFP29279 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.73■■■□□ 2.67
CTGFP29279 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CTGFP29279 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms