Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.47■□□□□ 0.71
IGHV3-30-3P0DP02 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.46■□□□□ 0.71
IGHV3-30-3P0DP02 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.46■□□□□ 0.71
IGHV3-30-3P0DP02 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IGHV3-30-3P0DP02 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.44■□□□□ 0.7
IGHV3-30-3P0DP02 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
IGHV3-30-3P0DP02 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGHV3-30-3P0DP02 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV3-30-3P0DP02 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV3-30-3P0DP02 AP002365.1-201ENST00000603448 772 ntBASIC19.41■□□□□ 0.7
IGHV3-30-3P0DP02 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IGHV3-30-3P0DP02 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGHV3-30-3P0DP02 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
IGHV3-30-3P0DP02 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGHV3-30-3P0DP02 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IGHV3-30-3P0DP02 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
IGHV3-30-3P0DP02 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.39■□□□□ 0.69
IGHV3-30-3P0DP02 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGHV3-30-3P0DP02 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IGHV3-30-3P0DP02 DYNLL1-208ENST00000550178 581 ntBASIC19.38■□□□□ 0.69
IGHV3-30-3P0DP02 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGHV3-30-3P0DP02 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IGHV3-30-3P0DP02 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGHV3-30-3P0DP02 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
IGHV3-30-3P0DP02 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.36■□□□□ 0.69
IGHV3-30-3P0DP02 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IGHV3-30-3P0DP02 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
IGHV3-30-3P0DP02 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IGHV3-30-3P0DP02 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IGHV3-30-3P0DP02 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
IGHV3-30-3P0DP02 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.33■□□□□ 0.68
IGHV3-30-3P0DP02 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.32■□□□□ 0.68
IGHV3-30-3P0DP02 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV3-30-3P0DP02 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IGHV3-30-3P0DP02 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV3-30-3P0DP02 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV3-30-3P0DP02 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV3-30-3P0DP02 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
IGHV3-30-3P0DP02 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV3-30-3P0DP02 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGHV3-30-3P0DP02 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV3-30-3P0DP02 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGHV3-30-3P0DP02 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV3-30-3P0DP02 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV3-30-3P0DP02 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV3-30-3P0DP02 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV3-30-3P0DP02 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGHV3-30-3P0DP02 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.27■□□□□ 0.68
IGHV3-30-3P0DP02 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IGHV3-30-3P0DP02 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
IGHV3-30-3P0DP02 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV3-30-3P0DP02 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGHV3-30-3P0DP02 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV3-30-3P0DP02 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV3-30-3P0DP02 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV3-30-3P0DP02 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV3-30-3P0DP02 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.22■□□□□ 0.67
IGHV3-30-3P0DP02 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.22■□□□□ 0.67
IGHV3-30-3P0DP02 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IGHV3-30-3P0DP02 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
IGHV3-30-3P0DP02 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.21■□□□□ 0.67
IGHV3-30-3P0DP02 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IGHV3-30-3P0DP02 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
IGHV3-30-3P0DP02 AL031258.1-201ENST00000623562 325 ntBASIC19.2■□□□□ 0.66
IGHV3-30-3P0DP02 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.2■□□□□ 0.66
IGHV3-30-3P0DP02 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV3-30-3P0DP02 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.18■□□□□ 0.66
IGHV3-30-3P0DP02 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IGHV3-30-3P0DP02 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
IGHV3-30-3P0DP02 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
IGHV3-30-3P0DP02 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV3-30-3P0DP02 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-30-3P0DP02 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV3-30-3P0DP02 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV3-30-3P0DP02 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV3-30-3P0DP02 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.1■□□□□ 0.65
IGHV3-30-3P0DP02 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.09■□□□□ 0.65
IGHV3-30-3P0DP02 ABCB10P1-201ENST00000614297 2181 ntBASIC19.09■□□□□ 0.65
IGHV3-30-3P0DP02 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IGHV3-30-3P0DP02 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV3-30-3P0DP02 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-30-3P0DP02 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-30-3P0DP02 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.07■□□□□ 0.64
IGHV3-30-3P0DP02 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-30-3P0DP02 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV3-30-3P0DP02 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGHV3-30-3P0DP02 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGHV3-30-3P0DP02 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.05■□□□□ 0.64
IGHV3-30-3P0DP02 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
IGHV3-30-3P0DP02 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGHV3-30-3P0DP02 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGHV3-30-3P0DP02 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.04■□□□□ 0.64
IGHV3-30-3P0DP02 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.04■□□□□ 0.64
IGHV3-30-3P0DP02 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms