Protein–RNA interactions for Protein: P05771

PRKCB, Protein kinase C beta type, humanhuman

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCBP05771 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
PRKCBP05771 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.57■■■□□ 2.48
PRKCBP05771 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PRKCBP05771 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.56■■■□□ 2.48
PRKCBP05771 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.55■■■□□ 2.48
PRKCBP05771 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
PRKCBP05771 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.54■■■□□ 2.48
PRKCBP05771 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PRKCBP05771 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PRKCBP05771 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.51■■■□□ 2.47
PRKCBP05771 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.49■■■□□ 2.47
PRKCBP05771 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRKCBP05771 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.49■■■□□ 2.47
PRKCBP05771 AC097358.2-201ENST00000607541 1159 ntBASIC30.49■■■□□ 2.47
PRKCBP05771 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PRKCBP05771 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PRKCBP05771 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PRKCBP05771 AC136428.2-201ENST00000563187 214 ntBASIC30.46■■■□□ 2.47
PRKCBP05771 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PRKCBP05771 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PRKCBP05771 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.41■■■□□ 2.46
PRKCBP05771 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PRKCBP05771 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PRKCBP05771 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PRKCBP05771 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PRKCBP05771 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.38■■■□□ 2.45
PRKCBP05771 AL133380.1-201ENST00000506013 324 ntBASIC30.37■■■□□ 2.45
PRKCBP05771 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.37■■■□□ 2.45
PRKCBP05771 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PRKCBP05771 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PRKCBP05771 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PRKCBP05771 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.34■■■□□ 2.45
PRKCBP05771 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PRKCBP05771 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PRKCBP05771 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.31■■■□□ 2.44
PRKCBP05771 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PRKCBP05771 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PRKCBP05771 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.29■■■□□ 2.44
PRKCBP05771 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
PRKCBP05771 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.27■■■□□ 2.44
PRKCBP05771 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PRKCBP05771 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.26■■■□□ 2.43
PRKCBP05771 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.26■■■□□ 2.43
PRKCBP05771 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
PRKCBP05771 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.24■■■□□ 2.43
PRKCBP05771 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PRKCBP05771 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRKCBP05771 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRKCBP05771 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PRKCBP05771 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PRKCBP05771 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
PRKCBP05771 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.2■■■□□ 2.43
PRKCBP05771 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.19■■■□□ 2.42
PRKCBP05771 SUZ12P1-203ENST00000578195 985 ntBASIC30.19■■■□□ 2.42
PRKCBP05771 CAHM-201ENST00000604200 896 ntBASIC30.19■■■□□ 2.42
PRKCBP05771 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
PRKCBP05771 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.18■■■□□ 2.42
PRKCBP05771 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
PRKCBP05771 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.14■■■□□ 2.42
PRKCBP05771 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
PRKCBP05771 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PRKCBP05771 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRKCBP05771 AL391121.1-201ENST00000607967 1349 ntBASIC30.13■■■□□ 2.41
PRKCBP05771 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.12■■■□□ 2.41
PRKCBP05771 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PRKCBP05771 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PRKCBP05771 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRKCBP05771 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PRKCBP05771 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PRKCBP05771 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
PRKCBP05771 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PRKCBP05771 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.07■■■□□ 2.41
PRKCBP05771 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PRKCBP05771 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PRKCBP05771 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PRKCBP05771 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
PRKCBP05771 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PRKCBP05771 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PRKCBP05771 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.03■■■□□ 2.4
PRKCBP05771 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PRKCBP05771 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRKCBP05771 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRKCBP05771 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.99■■■□□ 2.39
PRKCBP05771 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PRKCBP05771 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.98■■■□□ 2.39
PRKCBP05771 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PRKCBP05771 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PRKCBP05771 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PRKCBP05771 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PRKCBP05771 WASH5P-204ENST00000632292 975 ntBASIC29.95■■■□□ 2.39
PRKCBP05771 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.94■■■□□ 2.38
PRKCBP05771 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.94■■■□□ 2.38
PRKCBP05771 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
PRKCBP05771 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PRKCBP05771 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
PRKCBP05771 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
PRKCBP05771 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PRKCBP05771 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PRKCBP05771 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PRKCBP05771 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms