Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC4O95801 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TTC4O95801 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC4O95801 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC4O95801 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.48■■■□□ 2.15
TTC4O95801 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TTC4O95801 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
TTC4O95801 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TTC4O95801 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
TTC4O95801 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TTC4O95801 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.42■■■□□ 2.14
TTC4O95801 AC006077.2-201ENST00000623591 457 ntBASIC28.42■■■□□ 2.14
TTC4O95801 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.42■■■□□ 2.14
TTC4O95801 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC4O95801 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC4O95801 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC4O95801 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC4O95801 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.36■■■□□ 2.13
TTC4O95801 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.35■■■□□ 2.13
TTC4O95801 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TTC4O95801 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TTC4O95801 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TTC4O95801 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.29■■■□□ 2.12
TTC4O95801 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC4O95801 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TTC4O95801 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
TTC4O95801 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.26■■■□□ 2.11
TTC4O95801 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TTC4O95801 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TTC4O95801 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.24■■■□□ 2.11
TTC4O95801 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TTC4O95801 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
TTC4O95801 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.22■■■□□ 2.11
TTC4O95801 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.21■■■□□ 2.11
TTC4O95801 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
TTC4O95801 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
TTC4O95801 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC4O95801 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TTC4O95801 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TTC4O95801 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TTC4O95801 AC120057.4-201ENST00000624722 1615 ntBASIC28.17■■■□□ 2.1
TTC4O95801 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC4O95801 ZNRF2P1-201ENST00000441407 443 ntBASIC28.16■■■□□ 2.1
TTC4O95801 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TTC4O95801 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC4O95801 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TTC4O95801 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TTC4O95801 ABCB10P1-201ENST00000614297 2181 ntBASIC28.14■■■□□ 2.09
TTC4O95801 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
TTC4O95801 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.12■■■□□ 2.09
TTC4O95801 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TTC4O95801 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.1■■■□□ 2.09
TTC4O95801 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TTC4O95801 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC4O95801 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC4O95801 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TTC4O95801 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.09■■■□□ 2.09
TTC4O95801 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TTC4O95801 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TTC4O95801 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC4O95801 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC4O95801 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC4O95801 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TTC4O95801 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.06■■■□□ 2.08
TTC4O95801 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.06■■■□□ 2.08
TTC4O95801 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.05■■■□□ 2.08
TTC4O95801 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TTC4O95801 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TTC4O95801 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TTC4O95801 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.01■■■□□ 2.07
TTC4O95801 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC4O95801 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC4O95801 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
TTC4O95801 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TTC4O95801 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.98■■■□□ 2.07
TTC4O95801 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TTC4O95801 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
TTC4O95801 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.97■■■□□ 2.07
TTC4O95801 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TTC4O95801 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
TTC4O95801 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
TTC4O95801 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
TTC4O95801 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.95■■■□□ 2.07
TTC4O95801 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
TTC4O95801 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC4O95801 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC4O95801 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.93■■■□□ 2.06
TTC4O95801 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.93■■■□□ 2.06
TTC4O95801 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TTC4O95801 ABCB10P3-201ENST00000561950 2166 ntBASIC27.93■■■□□ 2.06
TTC4O95801 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TTC4O95801 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
TTC4O95801 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.91■■■□□ 2.06
TTC4O95801 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TTC4O95801 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.9■■■□□ 2.06
TTC4O95801 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
TTC4O95801 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TTC4O95801 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
TTC4O95801 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.88■■■□□ 2.05
TTC4O95801 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms