Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
RAMP3O60896 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
RAMP3O60896 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.74■■□□□ 1.23
RAMP3O60896 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RAMP3O60896 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC22.74■■□□□ 1.23
RAMP3O60896 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RAMP3O60896 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC22.72■■□□□ 1.23
RAMP3O60896 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.71■■□□□ 1.23
RAMP3O60896 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
RAMP3O60896 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RAMP3O60896 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAMP3O60896 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAMP3O60896 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAMP3O60896 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.63■■□□□ 1.21
RAMP3O60896 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.63■■□□□ 1.21
RAMP3O60896 AP002365.1-201ENST00000603448 772 ntBASIC22.63■■□□□ 1.21
RAMP3O60896 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RAMP3O60896 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RAMP3O60896 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.6■■□□□ 1.21
RAMP3O60896 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.6■■□□□ 1.21
RAMP3O60896 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAMP3O60896 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.6■■□□□ 1.21
RAMP3O60896 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAMP3O60896 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RAMP3O60896 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RAMP3O60896 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAMP3O60896 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RAMP3O60896 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RAMP3O60896 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAMP3O60896 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAMP3O60896 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAMP3O60896 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.55■■□□□ 1.2
RAMP3O60896 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAMP3O60896 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAMP3O60896 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.53■■□□□ 1.2
RAMP3O60896 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAMP3O60896 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAMP3O60896 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
RAMP3O60896 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.5■■□□□ 1.19
RAMP3O60896 AC120057.4-201ENST00000624722 1615 ntBASIC22.49■■□□□ 1.19
RAMP3O60896 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC22.49■■□□□ 1.19
RAMP3O60896 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAMP3O60896 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
RAMP3O60896 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
RAMP3O60896 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.47■■□□□ 1.19
RAMP3O60896 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RAMP3O60896 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAMP3O60896 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.45■■□□□ 1.18
RAMP3O60896 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.44■■□□□ 1.18
RAMP3O60896 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAMP3O60896 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.43■■□□□ 1.18
RAMP3O60896 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAMP3O60896 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAMP3O60896 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAMP3O60896 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAMP3O60896 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAMP3O60896 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAMP3O60896 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.41■■□□□ 1.18
RAMP3O60896 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC22.41■■□□□ 1.18
RAMP3O60896 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAMP3O60896 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAMP3O60896 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAMP3O60896 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
RAMP3O60896 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RAMP3O60896 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAMP3O60896 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RAMP3O60896 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAMP3O60896 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAMP3O60896 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAMP3O60896 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.34■■□□□ 1.17
RAMP3O60896 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.34■■□□□ 1.17
RAMP3O60896 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RAMP3O60896 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.33■■□□□ 1.17
RAMP3O60896 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.32■■□□□ 1.16
RAMP3O60896 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAMP3O60896 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RAMP3O60896 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.32■■□□□ 1.16
RAMP3O60896 ABCB10P1-201ENST00000614297 2181 ntBASIC22.32■■□□□ 1.16
RAMP3O60896 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAMP3O60896 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAMP3O60896 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAMP3O60896 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.3■■□□□ 1.16
RAMP3O60896 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAMP3O60896 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAMP3O60896 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.29■■□□□ 1.16
RAMP3O60896 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RAMP3O60896 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RAMP3O60896 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAMP3O60896 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.28■■□□□ 1.16
RAMP3O60896 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAMP3O60896 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RAMP3O60896 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAMP3O60896 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAMP3O60896 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAMP3O60896 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAMP3O60896 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.24■■□□□ 1.15
RAMP3O60896 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAMP3O60896 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAMP3O60896 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAMP3O60896 DYNLL1-208ENST00000550178 581 ntBASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms