Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.54■■■■□ 3.44
SIPA1L3O60292 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC36.52■■■■□ 3.44
SIPA1L3O60292 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC36.52■■■■□ 3.44
SIPA1L3O60292 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
SIPA1L3O60292 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36.5■■■■□ 3.43
SIPA1L3O60292 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.49■■■■□ 3.43
SIPA1L3O60292 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
SIPA1L3O60292 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC36.44■■■■□ 3.42
SIPA1L3O60292 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
SIPA1L3O60292 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
SIPA1L3O60292 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
SIPA1L3O60292 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
SIPA1L3O60292 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
SIPA1L3O60292 CAHM-201ENST00000604200 896 ntBASIC36.36■■■■□ 3.41
SIPA1L3O60292 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
SIPA1L3O60292 AL391121.1-201ENST00000607967 1349 ntBASIC36.36■■■■□ 3.41
SIPA1L3O60292 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC36.35■■■■□ 3.41
SIPA1L3O60292 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
SIPA1L3O60292 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
SIPA1L3O60292 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.41
SIPA1L3O60292 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
SIPA1L3O60292 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC36.3■■■■□ 3.4
SIPA1L3O60292 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
SIPA1L3O60292 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.27■■■■□ 3.4
SIPA1L3O60292 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
SIPA1L3O60292 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC36.24■■■■□ 3.39
SIPA1L3O60292 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
SIPA1L3O60292 AL162393.1-201ENST00000437852 946 ntBASIC36.21■■■■□ 3.39
SIPA1L3O60292 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
SIPA1L3O60292 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC36.21■■■■□ 3.39
SIPA1L3O60292 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
SIPA1L3O60292 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
SIPA1L3O60292 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC36.17■■■■□ 3.38
SIPA1L3O60292 HNRNPLP2-201ENST00000568980 1570 ntBASIC36.17■■■■□ 3.38
SIPA1L3O60292 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
SIPA1L3O60292 RPS2P35-201ENST00000443417 897 ntBASIC36.12■■■■□ 3.37
SIPA1L3O60292 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
SIPA1L3O60292 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.09■■■■□ 3.37
SIPA1L3O60292 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC36.07■■■■□ 3.36
SIPA1L3O60292 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.05■■■■□ 3.36
SIPA1L3O60292 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
SIPA1L3O60292 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36.04■■■■□ 3.36
SIPA1L3O60292 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.03■■■■□ 3.36
SIPA1L3O60292 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC36.02■■■■□ 3.36
SIPA1L3O60292 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
SIPA1L3O60292 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC36.01■■■■□ 3.35
SIPA1L3O60292 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC36■■■■□ 3.35
SIPA1L3O60292 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
SIPA1L3O60292 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.98■■■■□ 3.35
SIPA1L3O60292 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
SIPA1L3O60292 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
SIPA1L3O60292 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.94■■■■□ 3.34
SIPA1L3O60292 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.93■■■■□ 3.34
SIPA1L3O60292 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC35.92■■■■□ 3.34
SIPA1L3O60292 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
SIPA1L3O60292 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
SIPA1L3O60292 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
SIPA1L3O60292 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
SIPA1L3O60292 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
SIPA1L3O60292 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
SIPA1L3O60292 AP006261.1-201ENST00000584783 668 ntBASIC35.84■■■■□ 3.33
SIPA1L3O60292 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
SIPA1L3O60292 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
SIPA1L3O60292 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
SIPA1L3O60292 DUX4L28-201ENST00000623687 678 ntBASIC35.83■■■■□ 3.33
SIPA1L3O60292 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
SIPA1L3O60292 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.8■■■■□ 3.32
SIPA1L3O60292 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.76■■■■□ 3.32
SIPA1L3O60292 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
SIPA1L3O60292 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.72■■■■□ 3.31
SIPA1L3O60292 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.71■■■■□ 3.31
SIPA1L3O60292 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.71■■■■□ 3.31
SIPA1L3O60292 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
SIPA1L3O60292 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
SIPA1L3O60292 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.7■■■■□ 3.31
SIPA1L3O60292 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC35.7■■■■□ 3.31
SIPA1L3O60292 WASH5P-204ENST00000632292 975 ntBASIC35.7■■■■□ 3.31
SIPA1L3O60292 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.7■■■■□ 3.31
SIPA1L3O60292 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.69■■■■□ 3.3
SIPA1L3O60292 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
SIPA1L3O60292 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
SIPA1L3O60292 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.66■■■■□ 3.3
SIPA1L3O60292 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
SIPA1L3O60292 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
SIPA1L3O60292 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
SIPA1L3O60292 MIR762-201ENST00000390236 83 ntBASIC35.62■■■■□ 3.29
SIPA1L3O60292 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
SIPA1L3O60292 AC005559.1-201ENST00000589661 871 ntBASIC35.61■■■■□ 3.29
SIPA1L3O60292 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC35.61■■■■□ 3.29
SIPA1L3O60292 MIR3665-201ENST00000578708 105 ntBASIC35.59■■■■□ 3.29
SIPA1L3O60292 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.59■■■■□ 3.29
SIPA1L3O60292 AC087741.3-201ENST00000624270 1347 ntBASIC35.58■■■■□ 3.29
SIPA1L3O60292 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
SIPA1L3O60292 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC35.57■■■■□ 3.29
SIPA1L3O60292 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
SIPA1L3O60292 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
SIPA1L3O60292 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
SIPA1L3O60292 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.53■■■■□ 3.28
SIPA1L3O60292 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC35.53■■■■□ 3.28
SIPA1L3O60292 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.53■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms