Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
SMIM35A0A1B0GVV1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
SMIM35A0A1B0GVV1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.96■■■□□ 2.55
SMIM35A0A1B0GVV1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SMIM35A0A1B0GVV1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.95■■■□□ 2.55
SMIM35A0A1B0GVV1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
SMIM35A0A1B0GVV1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.93■■■□□ 2.54
SMIM35A0A1B0GVV1 AL133380.1-201ENST00000506013 324 ntBASIC30.92■■■□□ 2.54
SMIM35A0A1B0GVV1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SMIM35A0A1B0GVV1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
SMIM35A0A1B0GVV1 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SMIM35A0A1B0GVV1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SMIM35A0A1B0GVV1 CAHM-201ENST00000604200 896 ntBASIC30.9■■■□□ 2.54
SMIM35A0A1B0GVV1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SMIM35A0A1B0GVV1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.88■■■□□ 2.53
SMIM35A0A1B0GVV1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SMIM35A0A1B0GVV1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMIM35A0A1B0GVV1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SMIM35A0A1B0GVV1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.85■■■□□ 2.53
SMIM35A0A1B0GVV1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SMIM35A0A1B0GVV1 AL391121.1-201ENST00000607967 1349 ntBASIC30.8■■■□□ 2.52
SMIM35A0A1B0GVV1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SMIM35A0A1B0GVV1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SMIM35A0A1B0GVV1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SMIM35A0A1B0GVV1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SMIM35A0A1B0GVV1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.77■■■□□ 2.52
SMIM35A0A1B0GVV1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
SMIM35A0A1B0GVV1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SMIM35A0A1B0GVV1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.74■■■□□ 2.51
SMIM35A0A1B0GVV1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMIM35A0A1B0GVV1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.72■■■□□ 2.51
SMIM35A0A1B0GVV1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.71■■■□□ 2.51
SMIM35A0A1B0GVV1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
SMIM35A0A1B0GVV1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMIM35A0A1B0GVV1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
SMIM35A0A1B0GVV1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SMIM35A0A1B0GVV1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMIM35A0A1B0GVV1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SMIM35A0A1B0GVV1 RPS2P35-201ENST00000443417 897 ntBASIC30.64■■■□□ 2.5
SMIM35A0A1B0GVV1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SMIM35A0A1B0GVV1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.59■■■□□ 2.49
SMIM35A0A1B0GVV1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SMIM35A0A1B0GVV1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SMIM35A0A1B0GVV1 AP006261.1-201ENST00000584783 668 ntBASIC30.53■■■□□ 2.48
SMIM35A0A1B0GVV1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMIM35A0A1B0GVV1 AL162393.1-201ENST00000437852 946 ntBASIC30.5■■■□□ 2.47
SMIM35A0A1B0GVV1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
SMIM35A0A1B0GVV1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.5■■■□□ 2.47
SMIM35A0A1B0GVV1 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.49■■■□□ 2.47
SMIM35A0A1B0GVV1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.48■■■□□ 2.47
SMIM35A0A1B0GVV1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.48■■■□□ 2.47
SMIM35A0A1B0GVV1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMIM35A0A1B0GVV1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMIM35A0A1B0GVV1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.47■■■□□ 2.47
SMIM35A0A1B0GVV1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMIM35A0A1B0GVV1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMIM35A0A1B0GVV1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SMIM35A0A1B0GVV1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.46■■■□□ 2.47
SMIM35A0A1B0GVV1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMIM35A0A1B0GVV1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
SMIM35A0A1B0GVV1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.44■■■□□ 2.46
SMIM35A0A1B0GVV1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMIM35A0A1B0GVV1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMIM35A0A1B0GVV1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.42■■■□□ 2.46
SMIM35A0A1B0GVV1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.42■■■□□ 2.46
SMIM35A0A1B0GVV1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMIM35A0A1B0GVV1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMIM35A0A1B0GVV1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.39■■■□□ 2.46
SMIM35A0A1B0GVV1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMIM35A0A1B0GVV1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMIM35A0A1B0GVV1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.35■■■□□ 2.45
SMIM35A0A1B0GVV1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMIM35A0A1B0GVV1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMIM35A0A1B0GVV1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
SMIM35A0A1B0GVV1 MIR3665-201ENST00000578708 105 ntBASIC30.33■■■□□ 2.45
SMIM35A0A1B0GVV1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SMIM35A0A1B0GVV1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.32■■■□□ 2.44
SMIM35A0A1B0GVV1 WASH5P-204ENST00000632292 975 ntBASIC30.32■■■□□ 2.44
SMIM35A0A1B0GVV1 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.31■■■□□ 2.44
SMIM35A0A1B0GVV1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMIM35A0A1B0GVV1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SMIM35A0A1B0GVV1 MIR762-201ENST00000390236 83 ntBASIC30.3■■■□□ 2.44
SMIM35A0A1B0GVV1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.29■■■□□ 2.44
SMIM35A0A1B0GVV1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SMIM35A0A1B0GVV1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SMIM35A0A1B0GVV1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.27■■■□□ 2.44
SMIM35A0A1B0GVV1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SMIM35A0A1B0GVV1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
SMIM35A0A1B0GVV1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.25■■■□□ 2.43
SMIM35A0A1B0GVV1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMIM35A0A1B0GVV1 DUX4L28-201ENST00000623687 678 ntBASIC30.24■■■□□ 2.43
SMIM35A0A1B0GVV1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SMIM35A0A1B0GVV1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SMIM35A0A1B0GVV1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SMIM35A0A1B0GVV1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SMIM35A0A1B0GVV1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMIM35A0A1B0GVV1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.19■■■□□ 2.42
SMIM35A0A1B0GVV1 AC005559.1-201ENST00000589661 871 ntBASIC30.18■■■□□ 2.42
SMIM35A0A1B0GVV1 AC087741.3-201ENST00000624270 1347 ntBASIC30.18■■■□□ 2.42
SMIM35A0A1B0GVV1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms