Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRGV1A0A0A0MS02 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.04■□□□□ 0.8
TRGV1A0A0A0MS02 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.03■□□□□ 0.8
TRGV1A0A0A0MS02 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRGV1A0A0A0MS02 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRGV1A0A0A0MS02 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.02■□□□□ 0.79
TRGV1A0A0A0MS02 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRGV1A0A0A0MS02 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV1A0A0A0MS02 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV1A0A0A0MS02 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV1A0A0A0MS02 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
TRGV1A0A0A0MS02 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV1A0A0A0MS02 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
TRGV1A0A0A0MS02 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRGV1A0A0A0MS02 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV1A0A0A0MS02 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV1A0A0A0MS02 AL031258.1-201ENST00000623562 325 ntBASIC19.94■□□□□ 0.78
TRGV1A0A0A0MS02 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRGV1A0A0A0MS02 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRGV1A0A0A0MS02 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.91■□□□□ 0.78
TRGV1A0A0A0MS02 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRGV1A0A0A0MS02 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRGV1A0A0A0MS02 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRGV1A0A0A0MS02 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRGV1A0A0A0MS02 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.9■□□□□ 0.78
TRGV1A0A0A0MS02 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRGV1A0A0A0MS02 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRGV1A0A0A0MS02 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.88■□□□□ 0.77
TRGV1A0A0A0MS02 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRGV1A0A0A0MS02 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRGV1A0A0A0MS02 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.88■□□□□ 0.77
TRGV1A0A0A0MS02 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.86■□□□□ 0.77
TRGV1A0A0A0MS02 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.86■□□□□ 0.77
TRGV1A0A0A0MS02 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRGV1A0A0A0MS02 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRGV1A0A0A0MS02 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRGV1A0A0A0MS02 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRGV1A0A0A0MS02 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRGV1A0A0A0MS02 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRGV1A0A0A0MS02 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.84■□□□□ 0.77
TRGV1A0A0A0MS02 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TRGV1A0A0A0MS02 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.83■□□□□ 0.76
TRGV1A0A0A0MS02 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRGV1A0A0A0MS02 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRGV1A0A0A0MS02 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRGV1A0A0A0MS02 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRGV1A0A0A0MS02 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.8■□□□□ 0.76
TRGV1A0A0A0MS02 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRGV1A0A0A0MS02 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRGV1A0A0A0MS02 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.8■□□□□ 0.76
TRGV1A0A0A0MS02 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV1A0A0A0MS02 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRGV1A0A0A0MS02 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRGV1A0A0A0MS02 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRGV1A0A0A0MS02 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRGV1A0A0A0MS02 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRGV1A0A0A0MS02 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.76■□□□□ 0.75
TRGV1A0A0A0MS02 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV1A0A0A0MS02 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRGV1A0A0A0MS02 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.74■□□□□ 0.75
TRGV1A0A0A0MS02 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV1A0A0A0MS02 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV1A0A0A0MS02 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV1A0A0A0MS02 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRGV1A0A0A0MS02 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.73■□□□□ 0.75
TRGV1A0A0A0MS02 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.73■□□□□ 0.75
TRGV1A0A0A0MS02 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.73■□□□□ 0.75
TRGV1A0A0A0MS02 AC120057.4-201ENST00000624722 1615 ntBASIC19.73■□□□□ 0.75
TRGV1A0A0A0MS02 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
TRGV1A0A0A0MS02 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRGV1A0A0A0MS02 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRGV1A0A0A0MS02 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.71■□□□□ 0.75
TRGV1A0A0A0MS02 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRGV1A0A0A0MS02 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRGV1A0A0A0MS02 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV1A0A0A0MS02 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRGV1A0A0A0MS02 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRGV1A0A0A0MS02 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.69■□□□□ 0.74
TRGV1A0A0A0MS02 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRGV1A0A0A0MS02 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRGV1A0A0A0MS02 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.68■□□□□ 0.74
TRGV1A0A0A0MS02 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRGV1A0A0A0MS02 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.67■□□□□ 0.74
TRGV1A0A0A0MS02 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.67■□□□□ 0.74
TRGV1A0A0A0MS02 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.67■□□□□ 0.74
TRGV1A0A0A0MS02 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRGV1A0A0A0MS02 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRGV1A0A0A0MS02 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.64■□□□□ 0.73
TRGV1A0A0A0MS02 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRGV1A0A0A0MS02 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRGV1A0A0A0MS02 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRGV1A0A0A0MS02 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms