Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 MIR6084-201ENST00000622012 110 ntBASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TMEFF1Q8IYR6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 HLA-L-211ENST00000482052 1765 ntBASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 AC092437.1-201ENST00000624794 1048 ntBASIC22.48■■□□□ 1.19
TMEFF1Q8IYR6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 AL358852.1-201ENST00000623174 1268 ntBASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEFF1Q8IYR6 AC141586.4-201ENST00000624558 1573 ntBASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEFF1Q8IYR6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
TMEFF1Q8IYR6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
TMEFF1Q8IYR6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 AC027612.3-201ENST00000413684 1047 ntBASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 AC004911.1-201ENST00000416316 871 ntBASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 AL161729.1-201ENST00000604104 1402 ntBASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 ALDH1A3-203ENST00000557963 1670 ntBASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.45■■□□□ 1.18
TMEFF1Q8IYR6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 IGHV3-19-201ENST00000521488 291 ntBASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEFF1Q8IYR6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 AC123595.1-201ENST00000440769 1046 ntBASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.43■■□□□ 1.18
TMEFF1Q8IYR6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 MIR572-201ENST00000384983 95 ntBASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 AC012414.1-201ENST00000556676 535 ntBASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEFF1Q8IYR6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEFF1Q8IYR6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms