RNA–Protein interactions for RNA: ENST00000509171.5

ZFYVE28-207, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 2 BASIC

Gene ZFYVE28, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-207ENST00000509171 NISCHQ9Y2I1 1504 aa53.12■■■■■ 6.09
ZFYVE28-207ENST00000509171 CCDC180Q9P1Z9 1646 aa47.3■■■■■ 5.16
ZFYVE28-207ENST00000509171 ABCC9O60706 1549 aa46.44■■■■■ 5.03
ZFYVE28-207ENST00000509171 RB1CC1Q8TDY2 1594 aa44.6■■■■■ 4.73
ZFYVE28-207ENST00000509171 DCAF8L2P0C7V8 631 aa44.55■■■■■ 4.72
ZFYVE28-207ENST00000509171 NACADO15069 1562 aa44.51■■■■■ 4.72
ZFYVE28-207ENST00000509171 ZCCHC6Q5VYS8 1495 aaKnown RBP44.2■■■■■ 4.67
ZFYVE28-207ENST00000509171 MYO15BQ96JP2 1530 aa44.16■■■■■ 4.66
ZFYVE28-207ENST00000509171 DCAF1Q9Y4B6 1507 aa43.93■■■■■ 4.62
ZFYVE28-207ENST00000509171 UNC13AQ9UPW8 1703 aa43.64■■■■■ 4.58
ZFYVE28-207ENST00000509171 PABPN1Q86U42 306 aaKnown RBP eCLIP43.39■■■■■ 4.54
ZFYVE28-207ENST00000509171 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
ZFYVE28-207ENST00000509171 SCRIBQ14160 1630 aa43.17■■■■■ 4.5
ZFYVE28-207ENST00000509171 DNAJC5BQ9UF47 199 aa42.75■■■■■ 4.43
ZFYVE28-207ENST00000509171 SHROOM4Q9ULL8 1493 aa42.73■■■■■ 4.43
ZFYVE28-207ENST00000509171 EIF4G1Q04637 1599 aaKnown RBP42.12■■■■■ 4.33
ZFYVE28-207ENST00000509171 CC2D2AQ9P2K1 1620 aa42■■■■■ 4.31
ZFYVE28-207ENST00000509171 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
ZFYVE28-207ENST00000509171 SMARCA4P51532 1647 aa41.26■■■■■ 4.2
ZFYVE28-207ENST00000509171 BAZ1AQ9NRL2 1556 aaPredicted RBP41.19■■■■■ 4.18
ZFYVE28-207ENST00000509171 ATAD2BQ9ULI0 1458 aa41.07■■■■■ 4.16
ZFYVE28-207ENST00000509171 NCAPD3P42695 1498 aa41.06■■■■■ 4.16
ZFYVE28-207ENST00000509171 SMARCA2P51531 1590 aa41.01■■■■■ 4.16
ZFYVE28-207ENST00000509171 MROH2BQ7Z745 1585 aa40.95■■■■■ 4.15
ZFYVE28-207ENST00000509171 PEG3Q9GZU2 1588 aa40.83■■■■■ 4.13
ZFYVE28-207ENST00000509171 HMGXB3Q12766 1538 aa40.83■■■■■ 4.13
ZFYVE28-207ENST00000509171 BAZ1BQ9UIG0 1483 aaKnown RBP40.73■■■■■ 4.11
ZFYVE28-207ENST00000509171 WIZO95785 1651 aa40.53■■■■■ 4.08
ZFYVE28-207ENST00000509171 RSF1Q96T23 1441 aaPredicted RBP40.42■■■■■ 4.06
ZFYVE28-207ENST00000509171 NESP48681 1621 aa40.13■■■■■ 4.02
ZFYVE28-207ENST00000509171 TOP2AP11388 1531 aaKnown RBP40.05■■■■■ 4
ZFYVE28-207ENST00000509171 ERCC6Q03468 1493 aa40.04■■■■■ 4
ZFYVE28-207ENST00000509171 LAMC3Q9Y6N6 1575 aa40.01■■■■■ 4
ZFYVE28-207ENST00000509171 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
ZFYVE28-207ENST00000509171 PDS5BQ9NTI5 1447 aa39.76■■■■□ 3.96
ZFYVE28-207ENST00000509171 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
ZFYVE28-207ENST00000509171 CUX2O14529 1486 aa39.64■■■■□ 3.94
ZFYVE28-207ENST00000509171 CCDC88BA6NC98 1476 aa39.61■■■■□ 3.93
ZFYVE28-207ENST00000509171 CFTRP13569 1480 aa39.58■■■■□ 3.93
ZFYVE28-207ENST00000509171 THOC2Q8NI27 1593 aaKnown RBP39.54■■■■□ 3.92
ZFYVE28-207ENST00000509171 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
ZFYVE28-207ENST00000509171 CEP164Q9UPV0 1460 aa39.37■■■■□ 3.89
ZFYVE28-207ENST00000509171 SUPT5HO00267 1087 aaKnown RBP39.36■■■■□ 3.89
ZFYVE28-207ENST00000509171 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
ZFYVE28-207ENST00000509171 PRDM2Q13029 1718 aa39.34■■■■□ 3.89
ZFYVE28-207ENST00000509171 WDR62O43379 1518 aa39.2■■■■□ 3.87
ZFYVE28-207ENST00000509171 URB2Q14146 1524 aaKnown RBP39.02■■■■□ 3.84
ZFYVE28-207ENST00000509171 TOPBP1Q92547 1522 aa38.77■■■■□ 3.8
ZFYVE28-207ENST00000509171 ABCC8Q09428 1581 aa38.77■■■■□ 3.8
ZFYVE28-207ENST00000509171 DNMBPQ6XZF7 1577 aa38.71■■■■□ 3.79
ZFYVE28-207ENST00000509171 DNAJC5Q9H3Z4 198 aa38.63■■■■□ 3.77
ZFYVE28-207ENST00000509171 IFT140Q96RY7 1462 aa38.55■■■■□ 3.76
ZFYVE28-207ENST00000509171 CUX1P39880 1505 aa38.42■■■■□ 3.74
ZFYVE28-207ENST00000509171 POLA1P09884 1462 aaPredicted RBP38.41■■■■□ 3.74
ZFYVE28-207ENST00000509171 ZNF608Q9ULD9 1512 aaPredicted RBP38.39■■■■□ 3.74
ZFYVE28-207ENST00000509171 TARBP1Q13395 1621 aaKnown RBP38.35■■■■□ 3.73
ZFYVE28-207ENST00000509171 FGD5Q6ZNL6 1462 aa38.32■■■■□ 3.72
ZFYVE28-207ENST00000509171 SOGA1O94964 1423 aa38.29■■■■□ 3.72
ZFYVE28-207ENST00000509171 RAD54L2Q9Y4B4 1467 aa38.28■■■■□ 3.72
ZFYVE28-207ENST00000509171 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
ZFYVE28-207ENST00000509171 AQRO60306 1485 aaKnown RBP eCLIP38.18■■■■□ 3.71e-6■■□□□ 11.4
ZFYVE28-207ENST00000509171 WRNQ14191 1432 aaPredicted RBP eCLIP38.12■■■■□ 3.69
ZFYVE28-207ENST00000509171 TDRD9Q8NDG6 1382 aaKnown RBP38.09■■■■□ 3.69
ZFYVE28-207ENST00000509171 BIVM-ERCC5R4GMW8 1640 aa38.06■■■■□ 3.68
ZFYVE28-207ENST00000509171 TOP2BQ02880 1626 aa38.05■■■■□ 3.68
ZFYVE28-207ENST00000509171 SYNJ1O43426 1573 aa38.04■■■■□ 3.68
ZFYVE28-207ENST00000509171 WDR97A6NE52 1622 aa38.03■■■■□ 3.68
ZFYVE28-207ENST00000509171 OSCARQ8IYS5 282 aa38.03■■■■□ 3.68
ZFYVE28-207ENST00000509171 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
ZFYVE28-207ENST00000509171 GRIN2BQ13224 1484 aa37.84■■■■□ 3.65
ZFYVE28-207ENST00000509171 GAPVD1Q14C86 1478 aa37.84■■■■□ 3.65
ZFYVE28-207ENST00000509171 CHD1O14646 1710 aa37.83■■■■□ 3.65
ZFYVE28-207ENST00000509171 SNAPC4Q5SXM2 1469 aa37.81■■■■□ 3.64
ZFYVE28-207ENST00000509171 FBLN2P98095 1184 aa37.8■■■■□ 3.64
ZFYVE28-207ENST00000509171 ABCA5Q8WWZ7 1642 aa37.79■■■■□ 3.64
ZFYVE28-207ENST00000509171 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
ZFYVE28-207ENST00000509171 MAGI1Q96QZ7 1491 aaPredicted RBP37.75■■■■□ 3.63
ZFYVE28-207ENST00000509171 CHMP7Q8WUX9 453 aaPredicted RBP37.65■■■■□ 3.62
ZFYVE28-207ENST00000509171 SYNJ2O15056 1496 aa37.6■■■■□ 3.61
ZFYVE28-207ENST00000509171 ERICH3Q5RHP9 1530 aa37.48■■■■□ 3.59
ZFYVE28-207ENST00000509171 ADAMTS12P58397 1594 aa37.44■■■■□ 3.58
ZFYVE28-207ENST00000509171 RIMBP3CA6NJZ7 1639 aa37.41■■■■□ 3.58
ZFYVE28-207ENST00000509171 RIMBP3BA6NNM3 1639 aa37.41■■■■□ 3.58
ZFYVE28-207ENST00000509171 RIMBP3Q9UFD9 1639 aa37.41■■■■□ 3.58
ZFYVE28-207ENST00000509171 FHAD1B1AJZ9 1412 aa37.38■■■■□ 3.57
ZFYVE28-207ENST00000509171 ARHGEF11O15085 1522 aa37.36■■■■□ 3.57
ZFYVE28-207ENST00000509171 CLASP1Q7Z460 1538 aa37.36■■■■□ 3.57
ZFYVE28-207ENST00000509171 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
ZFYVE28-207ENST00000509171 GRIN2AQ12879 1464 aa37.35■■■■□ 3.57
ZFYVE28-207ENST00000509171 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
ZFYVE28-207ENST00000509171 IGF1RP08069 1367 aa37.22■■■■□ 3.55
ZFYVE28-207ENST00000509171 NUP160Q12769 1436 aa37.18■■■■□ 3.54
ZFYVE28-207ENST00000509171 CEP170Q5SW79 1584 aa37.17■■■■□ 3.54
ZFYVE28-207ENST00000509171 CUL7Q14999 1698 aa37.13■■■■□ 3.53
ZFYVE28-207ENST00000509171 CYB5RLQ6IPT4 315 aa37.09■■■■□ 3.53
ZFYVE28-207ENST00000509171 ARAP1Q96P48 1450 aa37.05■■■■□ 3.52
ZFYVE28-207ENST00000509171 CARMIL1Q5VZK9 1371 aa37.01■■■■□ 3.51
ZFYVE28-207ENST00000509171 RUSC2Q8N2Y8 1516 aa36.98■■■■□ 3.51
ZFYVE28-207ENST00000509171 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
ZFYVE28-207ENST00000509171 JPH4Q96JJ6 628 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms