RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 NISCHQ9Y2I1 1504 aa53.31■■■■■ 6.12
RFC2-201ENST00000055077 CCDC180Q9P1Z9 1646 aa46.64■■■■■ 5.06
RFC2-201ENST00000055077 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
RFC2-201ENST00000055077 ABCC9O60706 1549 aa44.13■■■■■ 4.66
RFC2-201ENST00000055077 DCAF1Q9Y4B6 1507 aa44.13■■■■■ 4.66
RFC2-201ENST00000055077 DCAF8L2P0C7V8 631 aa43.93■■■■■ 4.62
RFC2-201ENST00000055077 MYO15BQ96JP2 1530 aa43.69■■■■■ 4.58
RFC2-201ENST00000055077 NACADO15069 1562 aa43.45■■■■■ 4.55
RFC2-201ENST00000055077 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
RFC2-201ENST00000055077 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
RFC2-201ENST00000055077 SCRIBQ14160 1630 aa42.79■■■■■ 4.44
RFC2-201ENST00000055077 UNC13AQ9UPW8 1703 aa42.21■■■■■ 4.35
RFC2-201ENST00000055077 BICRAQ9NZM4 1560 aa41.78■■■■■ 4.28
RFC2-201ENST00000055077 PABPN1Q86U42 306 aaKnown RBP eCLIP41.52■■■■■ 4.24
RFC2-201ENST00000055077 SUPT5HO00267 1087 aaKnown RBP41.51■■■■■ 4.24
RFC2-201ENST00000055077 CECR2Q9BXF3 1484 aa41.38■■■■■ 4.21
RFC2-201ENST00000055077 RSF1Q96T23 1441 aaPredicted RBP41.25■■■■■ 4.19
RFC2-201ENST00000055077 BAZ1AQ9NRL2 1556 aaPredicted RBP41.21■■■■■ 4.19
RFC2-201ENST00000055077 MROH2BQ7Z745 1585 aa41.15■■■■■ 4.18
RFC2-201ENST00000055077 SMARCA4P51532 1647 aa41.04■■■■■ 4.16
RFC2-201ENST00000055077 WIZO95785 1651 aa40.81■■■■■ 4.12
RFC2-201ENST00000055077 PEG3Q9GZU2 1588 aa40.57■■■■■ 4.09
RFC2-201ENST00000055077 EIF4G1Q04637 1599 aaKnown RBP40.55■■■■■ 4.08
RFC2-201ENST00000055077 TOP2AP11388 1531 aaKnown RBP40.44■■■■■ 4.06
RFC2-201ENST00000055077 SMARCA2P51531 1590 aa40.39■■■■■ 4.06
RFC2-201ENST00000055077 ATAD2BQ9ULI0 1458 aa40.37■■■■■ 4.05
RFC2-201ENST00000055077 BAZ1BQ9UIG0 1483 aaKnown RBP40.16■■■■■ 4.02
RFC2-201ENST00000055077 NCAPD3P42695 1498 aa40.06■■■■■ 4
RFC2-201ENST00000055077 HMGXB3Q12766 1538 aa40.05■■■■■ 4
RFC2-201ENST00000055077 CC2D2AQ9P2K1 1620 aa39.98■■■■□ 3.99
RFC2-201ENST00000055077 CCDC88BA6NC98 1476 aa39.95■■■■□ 3.99
RFC2-201ENST00000055077 CHIC1Q5VXU3 224 aa39.67■■■■□ 3.94
RFC2-201ENST00000055077 CFTRP13569 1480 aa39.14■■■■□ 3.86
RFC2-201ENST00000055077 TRIM41Q8WV44 630 aa39.09■■■■□ 3.85
RFC2-201ENST00000055077 ABCC8Q09428 1581 aa39.06■■■■□ 3.84
RFC2-201ENST00000055077 CADPSQ9ULU8 1353 aa39■■■■□ 3.83
RFC2-201ENST00000055077 PRDM2Q13029 1718 aa38.99■■■■□ 3.83
RFC2-201ENST00000055077 DNAJC5BQ9UF47 199 aa38.97■■■■□ 3.83
RFC2-201ENST00000055077 WRNQ14191 1432 aaPredicted RBP eCLIP38.86■■■■□ 3.81
RFC2-201ENST00000055077 LAMC3Q9Y6N6 1575 aa38.77■■■■□ 3.8
RFC2-201ENST00000055077 SYNJ1O43426 1573 aa38.71■■■■□ 3.79
RFC2-201ENST00000055077 NESP48681 1621 aa38.69■■■■□ 3.78
RFC2-201ENST00000055077 TOP2BQ02880 1626 aa38.6■■■■□ 3.77
RFC2-201ENST00000055077 FANCD2Q9BXW9 1451 aa38.59■■■■□ 3.77
RFC2-201ENST00000055077 BIVM-ERCC5R4GMW8 1640 aa38.58■■■■□ 3.77
RFC2-201ENST00000055077 CUX1P39880 1505 aa38.5■■■■□ 3.75
RFC2-201ENST00000055077 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
RFC2-201ENST00000055077 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
RFC2-201ENST00000055077 FAM9AQ8IZU1 332 aaPredicted RBP38.3■■■■□ 3.72
RFC2-201ENST00000055077 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
RFC2-201ENST00000055077 SOGA1O94964 1423 aa38.27■■■■□ 3.72
RFC2-201ENST00000055077 EEA1Q15075 1411 aa38.26■■■■□ 3.71
RFC2-201ENST00000055077 DNMBPQ6XZF7 1577 aa38.25■■■■□ 3.71
RFC2-201ENST00000055077 TOPBP1Q92547 1522 aa38.16■■■■□ 3.7
RFC2-201ENST00000055077 FGD5Q6ZNL6 1462 aa38.12■■■■□ 3.69
RFC2-201ENST00000055077 RUSC2Q8N2Y8 1516 aa38.11■■■■□ 3.69
RFC2-201ENST00000055077 URB2Q14146 1524 aaKnown RBP38.11■■■■□ 3.69
RFC2-201ENST00000055077 LOC105371045A0A1W2PR82 267 aa38.08■■■■□ 3.69
RFC2-201ENST00000055077 MRC2Q9UBG0 1479 aa37.97■■■■□ 3.67
RFC2-201ENST00000055077 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
RFC2-201ENST00000055077 CSRNP3Q8WYN3 585 aa37.96■■■■□ 3.67
RFC2-201ENST00000055077 KIF27Q86VH2 1401 aa37.9■■■■□ 3.66
RFC2-201ENST00000055077 ERCC6Q03468 1493 aa37.9■■■■□ 3.66
RFC2-201ENST00000055077 CUX2O14529 1486 aa37.83■■■■□ 3.65
RFC2-201ENST00000055077 WDR62O43379 1518 aa37.8■■■■□ 3.64
RFC2-201ENST00000055077 ABCA10Q8WWZ4 1543 aa37.8■■■■□ 3.64
RFC2-201ENST00000055077 RAD54L2Q9Y4B4 1467 aa37.79■■■■□ 3.64
RFC2-201ENST00000055077 KIF21BO75037 1637 aa37.77■■■■□ 3.64
RFC2-201ENST00000055077 EHMT2Q96KQ7 1210 aa37.73■■■■□ 3.63
RFC2-201ENST00000055077 WDR97A6NE52 1622 aa37.72■■■■□ 3.63
RFC2-201ENST00000055077 THOC2Q8NI27 1593 aaKnown RBP37.72■■■■□ 3.63
RFC2-201ENST00000055077 GOLGA3Q08378 1498 aa37.7■■■■□ 3.63
RFC2-201ENST00000055077 TARBP1Q13395 1621 aaKnown RBP37.61■■■■□ 3.61
RFC2-201ENST00000055077 PRXQ9BXM0 1461 aa37.6■■■■□ 3.61
RFC2-201ENST00000055077 ERICH3Q5RHP9 1530 aa37.56■■■■□ 3.6
RFC2-201ENST00000055077 RAPGEF2Q9Y4G8 1499 aa37.53■■■■□ 3.6
RFC2-201ENST00000055077 IGF1RP08069 1367 aa37.53■■■■□ 3.6
RFC2-201ENST00000055077 ABCA5Q8WWZ7 1642 aa37.52■■■■□ 3.6
RFC2-201ENST00000055077 TNIKQ9UKE5 1360 aa37.52■■■■□ 3.6
RFC2-201ENST00000055077 IFT140Q96RY7 1462 aa37.49■■■■□ 3.59
RFC2-201ENST00000055077 UBTFP17480 764 aaKnown RBP37.44■■■■□ 3.58
RFC2-201ENST00000055077 TDRD9Q8NDG6 1382 aaKnown RBP37.42■■■■□ 3.58
RFC2-201ENST00000055077 GAPVD1Q14C86 1478 aa37.41■■■■□ 3.58
RFC2-201ENST00000055077 CUL7Q14999 1698 aa37.37■■■■□ 3.57
RFC2-201ENST00000055077 CARMIL1Q5VZK9 1371 aa37.35■■■■□ 3.57
RFC2-201ENST00000055077 CEP162Q5TB80 1403 aa37.31■■■■□ 3.56
RFC2-201ENST00000055077 PBRM1Q86U86 1689 aa37.26■■■■□ 3.55
RFC2-201ENST00000055077 ZNF608Q9ULD9 1512 aaPredicted RBP37.23■■■■□ 3.55
RFC2-201ENST00000055077 AQRO60306 1485 aaKnown RBP eCLIP37.22■■■■□ 3.551e-6■■■□□ 18.3
RFC2-201ENST00000055077 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
RFC2-201ENST00000055077 GRIN2BQ13224 1484 aa37.16■■■■□ 3.54
RFC2-201ENST00000055077 CLIP1P30622 1438 aa37.06■■■■□ 3.52
RFC2-201ENST00000055077 ADAMTS12P58397 1594 aa37.05■■■■□ 3.52
RFC2-201ENST00000055077 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
RFC2-201ENST00000055077 SNAPC4Q5SXM2 1469 aa36.93■■■■□ 3.5
RFC2-201ENST00000055077 CTTNBP2Q8WZ74 1663 aa36.91■■■■□ 3.5
RFC2-201ENST00000055077 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
RFC2-201ENST00000055077 RANGAP1P46060 587 aaPredicted RBP36.83■■■■□ 3.49
RFC2-201ENST00000055077 ARHGAP35Q9NRY4 1499 aa36.75■■■■□ 3.47
RFC2-201ENST00000055077 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms