RNA–Protein interactions for RNA: ENST00000557963.1

ALDH1A3-203, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

BASIC

Gene ALDH1A3, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-203ENST00000557963 NISCHQ9Y2I1 1504 aa53.16■■■■■ 6.1
ALDH1A3-203ENST00000557963 CCDC180Q9P1Z9 1646 aa46.69■■■■■ 5.07
ALDH1A3-203ENST00000557963 ABCC9O60706 1549 aa44.68■■■■■ 4.74
ALDH1A3-203ENST00000557963 ZCCHC6Q5VYS8 1495 aaKnown RBP44.54■■■■■ 4.72
ALDH1A3-203ENST00000557963 DCAF8L2P0C7V8 631 aa44.05■■■■■ 4.64
ALDH1A3-203ENST00000557963 DCAF1Q9Y4B6 1507 aa44.01■■■■■ 4.64
ALDH1A3-203ENST00000557963 MYO15BQ96JP2 1530 aa43.75■■■■■ 4.59
ALDH1A3-203ENST00000557963 NACADO15069 1562 aa43.66■■■■■ 4.58
ALDH1A3-203ENST00000557963 RB1CC1Q8TDY2 1594 aa43.44■■■■■ 4.54
ALDH1A3-203ENST00000557963 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
ALDH1A3-203ENST00000557963 SCRIBQ14160 1630 aa42.78■■■■■ 4.44
ALDH1A3-203ENST00000557963 UNC13AQ9UPW8 1703 aa42.42■■■■■ 4.38
ALDH1A3-203ENST00000557963 BICRAQ9NZM4 1560 aa42.07■■■■■ 4.32
ALDH1A3-203ENST00000557963 PABPN1Q86U42 306 aaKnown RBP eCLIP41.97■■■■■ 4.31
ALDH1A3-203ENST00000557963 CECR2Q9BXF3 1484 aa41.31■■■■■ 4.2
ALDH1A3-203ENST00000557963 BAZ1AQ9NRL2 1556 aaPredicted RBP41.13■■■■■ 4.18
ALDH1A3-203ENST00000557963 MROH2BQ7Z745 1585 aa41.01■■■■■ 4.16
ALDH1A3-203ENST00000557963 SMARCA4P51532 1647 aa40.99■■■■■ 4.15
ALDH1A3-203ENST00000557963 RSF1Q96T23 1441 aaPredicted RBP40.97■■■■■ 4.15
ALDH1A3-203ENST00000557963 EIF4G1Q04637 1599 aaKnown RBP40.89■■■■■ 4.14
ALDH1A3-203ENST00000557963 SUPT5HO00267 1087 aaKnown RBP40.88■■■■■ 4.14
ALDH1A3-203ENST00000557963 WIZO95785 1651 aa40.62■■■■■ 4.09
ALDH1A3-203ENST00000557963 PEG3Q9GZU2 1588 aa40.55■■■■■ 4.08
ALDH1A3-203ENST00000557963 ATAD2BQ9ULI0 1458 aa40.5■■■■■ 4.07
ALDH1A3-203ENST00000557963 SMARCA2P51531 1590 aa40.5■■■■■ 4.07
ALDH1A3-203ENST00000557963 CC2D2AQ9P2K1 1620 aa40.43■■■■■ 4.06
ALDH1A3-203ENST00000557963 NCAPD3P42695 1498 aa40.28■■■■■ 4.04
ALDH1A3-203ENST00000557963 TOP2AP11388 1531 aaKnown RBP40.25■■■■■ 4.03
ALDH1A3-203ENST00000557963 BAZ1BQ9UIG0 1483 aaKnown RBP40.25■■■■■ 4.03
ALDH1A3-203ENST00000557963 HMGXB3Q12766 1538 aa40.19■■■■■ 4.02
ALDH1A3-203ENST00000557963 DNAJC5BQ9UF47 199 aa39.94■■■■□ 3.98
ALDH1A3-203ENST00000557963 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
ALDH1A3-203ENST00000557963 CFTRP13569 1480 aa39.2■■■■□ 3.87
ALDH1A3-203ENST00000557963 CADPSQ9ULU8 1353 aa39.2■■■■□ 3.87
ALDH1A3-203ENST00000557963 LAMC3Q9Y6N6 1575 aa39.03■■■■□ 3.84
ALDH1A3-203ENST00000557963 NESP48681 1621 aa38.99■■■■□ 3.83
ALDH1A3-203ENST00000557963 PRDM2Q13029 1718 aa38.92■■■■□ 3.82
ALDH1A3-203ENST00000557963 CHIC1Q5VXU3 224 aa38.8■■■■□ 3.8
ALDH1A3-203ENST00000557963 PDS5BQ9NTI5 1447 aa38.76■■■■□ 3.8
ALDH1A3-203ENST00000557963 FANCD2Q9BXW9 1451 aa38.76■■■■□ 3.79
ALDH1A3-203ENST00000557963 ABCC8Q09428 1581 aa38.71■■■■□ 3.79
ALDH1A3-203ENST00000557963 WRNQ14191 1432 aaPredicted RBP eCLIP38.61■■■■□ 3.77
ALDH1A3-203ENST00000557963 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
ALDH1A3-203ENST00000557963 TRIM41Q8WV44 630 aa38.53■■■■□ 3.76
ALDH1A3-203ENST00000557963 KIF21AQ7Z4S6 1674 aa38.52■■■■□ 3.76
ALDH1A3-203ENST00000557963 SYNJ1O43426 1573 aa38.43■■■■□ 3.74
ALDH1A3-203ENST00000557963 ERCC6Q03468 1493 aa38.43■■■■□ 3.74
ALDH1A3-203ENST00000557963 CUX1P39880 1505 aa38.4■■■■□ 3.74
ALDH1A3-203ENST00000557963 TOP2BQ02880 1626 aa38.36■■■■□ 3.73
ALDH1A3-203ENST00000557963 BIVM-ERCC5R4GMW8 1640 aa38.33■■■■□ 3.73
ALDH1A3-203ENST00000557963 DNMBPQ6XZF7 1577 aa38.3■■■■□ 3.72
ALDH1A3-203ENST00000557963 URB2Q14146 1524 aaKnown RBP38.29■■■■□ 3.72
ALDH1A3-203ENST00000557963 MRC2Q9UBG0 1479 aa38.28■■■■□ 3.72
ALDH1A3-203ENST00000557963 TOPBP1Q92547 1522 aa38.26■■■■□ 3.72
ALDH1A3-203ENST00000557963 THOC2Q8NI27 1593 aaKnown RBP38.11■■■■□ 3.69
ALDH1A3-203ENST00000557963 WDR62O43379 1518 aa38.1■■■■□ 3.69
ALDH1A3-203ENST00000557963 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
ALDH1A3-203ENST00000557963 POLA1P09884 1462 aaPredicted RBP38.02■■■■□ 3.68
ALDH1A3-203ENST00000557963 SOGA1O94964 1423 aa37.89■■■■□ 3.66
ALDH1A3-203ENST00000557963 RAD54L2Q9Y4B4 1467 aa37.85■■■■□ 3.65
ALDH1A3-203ENST00000557963 CUX2O14529 1486 aa37.79■■■■□ 3.64
ALDH1A3-203ENST00000557963 ABCA10Q8WWZ4 1543 aa37.78■■■■□ 3.64
ALDH1A3-203ENST00000557963 EEA1Q15075 1411 aa37.75■■■■□ 3.63
ALDH1A3-203ENST00000557963 FAM9AQ8IZU1 332 aaPredicted RBP37.75■■■■□ 3.63
ALDH1A3-203ENST00000557963 RUSC2Q8N2Y8 1516 aa37.73■■■■□ 3.63
ALDH1A3-203ENST00000557963 IFT140Q96RY7 1462 aa37.72■■■■□ 3.63
ALDH1A3-203ENST00000557963 TARBP1Q13395 1621 aaKnown RBP37.72■■■■□ 3.63
ALDH1A3-203ENST00000557963 KIF27Q86VH2 1401 aa37.71■■■■□ 3.63
ALDH1A3-203ENST00000557963 WDR97A6NE52 1622 aa37.67■■■■□ 3.62
ALDH1A3-203ENST00000557963 TDRD9Q8NDG6 1382 aaKnown RBP37.56■■■■□ 3.6
ALDH1A3-203ENST00000557963 CSRNP3Q8WYN3 585 aa37.55■■■■□ 3.6
ALDH1A3-203ENST00000557963 ABCA5Q8WWZ7 1642 aa37.5■■■■□ 3.59
ALDH1A3-203ENST00000557963 GAPVD1Q14C86 1478 aa37.47■■■■□ 3.59
ALDH1A3-203ENST00000557963 ZNF608Q9ULD9 1512 aaPredicted RBP37.47■■■■□ 3.59
ALDH1A3-203ENST00000557963 AQRO60306 1485 aaKnown RBP eCLIP37.42■■■■□ 3.58
ALDH1A3-203ENST00000557963 IGF1RP08069 1367 aa37.4■■■■□ 3.58
ALDH1A3-203ENST00000557963 EIF4G3O43432 1585 aaKnown RBP37.36■■■■□ 3.57
ALDH1A3-203ENST00000557963 ERICH3Q5RHP9 1530 aa37.33■■■■□ 3.57
ALDH1A3-203ENST00000557963 GRIN2BQ13224 1484 aa37.3■■■■□ 3.56
ALDH1A3-203ENST00000557963 PBRM1Q86U86 1689 aa37.27■■■■□ 3.56
ALDH1A3-203ENST00000557963 PRXQ9BXM0 1461 aa37.27■■■■□ 3.56
ALDH1A3-203ENST00000557963 KIF21BO75037 1637 aa37.25■■■■□ 3.55
ALDH1A3-203ENST00000557963 LOC105371045A0A1W2PR82 267 aa37.24■■■■□ 3.55
ALDH1A3-203ENST00000557963 CARMIL1Q5VZK9 1371 aa37.22■■■■□ 3.55
ALDH1A3-203ENST00000557963 CUL7Q14999 1698 aa37.21■■■■□ 3.55
ALDH1A3-203ENST00000557963 EHMT2Q96KQ7 1210 aa37.19■■■■□ 3.54
ALDH1A3-203ENST00000557963 GOLGA3Q08378 1498 aa37.16■■■■□ 3.54
ALDH1A3-203ENST00000557963 RAPGEF2Q9Y4G8 1499 aa37.14■■■■□ 3.54
ALDH1A3-203ENST00000557963 SNAPC4Q5SXM2 1469 aa37.1■■■■□ 3.53
ALDH1A3-203ENST00000557963 FHAD1B1AJZ9 1412 aa37.08■■■■□ 3.53
ALDH1A3-203ENST00000557963 ADAMTS12P58397 1594 aa37.07■■■■□ 3.52
ALDH1A3-203ENST00000557963 MAGI1Q96QZ7 1491 aaPredicted RBP37.07■■■■□ 3.52
ALDH1A3-203ENST00000557963 UBTFP17480 764 aaKnown RBP37■■■■□ 3.51
ALDH1A3-203ENST00000557963 SYNJ2O15056 1496 aa36.91■■■■□ 3.5
ALDH1A3-203ENST00000557963 TNIKQ9UKE5 1360 aa36.91■■■■□ 3.5
ALDH1A3-203ENST00000557963 CHMP7Q8WUX9 453 aaPredicted RBP36.85■■■■□ 3.49
ALDH1A3-203ENST00000557963 GRIN2AQ12879 1464 aa36.82■■■■□ 3.48
ALDH1A3-203ENST00000557963 FBLN2P98095 1184 aa36.8■■■■□ 3.48
ALDH1A3-203ENST00000557963 CTTNBP2Q8WZ74 1663 aa36.66■■■■□ 3.46
ALDH1A3-203ENST00000557963 CEP162Q5TB80 1403 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms