RNA–Protein interactions for RNA: ENST00000614675.4

SNCB-206, Transcript of synuclein beta, humanhuman

TSL 1 (best) BASIC

Gene SNCB, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-206ENST00000614675 NISCHQ9Y2I1 1504 aa53.28■■■■■ 6.12
SNCB-206ENST00000614675 CCDC180Q9P1Z9 1646 aa47.25■■■■■ 5.16
SNCB-206ENST00000614675 ABCC9O60706 1549 aa46.15■■■■■ 4.98
SNCB-206ENST00000614675 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
SNCB-206ENST00000614675 ZCCHC6Q5VYS8 1495 aaKnown RBP44.41■■■■■ 4.7
SNCB-206ENST00000614675 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
SNCB-206ENST00000614675 NACADO15069 1562 aa44.39■■■■■ 4.7
SNCB-206ENST00000614675 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
SNCB-206ENST00000614675 DCAF1Q9Y4B6 1507 aa44.05■■■■■ 4.64
SNCB-206ENST00000614675 UNC13AQ9UPW8 1703 aa43.46■■■■■ 4.55
SNCB-206ENST00000614675 SCRIBQ14160 1630 aa43.2■■■■■ 4.51
SNCB-206ENST00000614675 PABPN1Q86U42 306 aaKnown RBP eCLIP43.17■■■■■ 4.5
SNCB-206ENST00000614675 BICRAQ9NZM4 1560 aa43.09■■■■■ 4.49
SNCB-206ENST00000614675 SHROOM4Q9ULL8 1493 aa42.57■■■■■ 4.41
SNCB-206ENST00000614675 DNAJC5BQ9UF47 199 aa42.22■■■■■ 4.35
SNCB-206ENST00000614675 EIF4G1Q04637 1599 aaKnown RBP41.93■■■■■ 4.3
SNCB-206ENST00000614675 CC2D2AQ9P2K1 1620 aa41.73■■■■■ 4.27
SNCB-206ENST00000614675 CECR2Q9BXF3 1484 aa41.52■■■■■ 4.24
SNCB-206ENST00000614675 SMARCA4P51532 1647 aa41.31■■■■■ 4.2
SNCB-206ENST00000614675 BAZ1AQ9NRL2 1556 aaPredicted RBP41.26■■■■■ 4.2
SNCB-206ENST00000614675 MROH2BQ7Z745 1585 aa41.09■■■■■ 4.17
SNCB-206ENST00000614675 ATAD2BQ9ULI0 1458 aa41.04■■■■■ 4.16
SNCB-206ENST00000614675 SMARCA2P51531 1590 aa40.97■■■■■ 4.15
SNCB-206ENST00000614675 NCAPD3P42695 1498 aa40.97■■■■■ 4.15
SNCB-206ENST00000614675 PEG3Q9GZU2 1588 aa40.87■■■■■ 4.13
SNCB-206ENST00000614675 HMGXB3Q12766 1538 aa40.78■■■■■ 4.12
SNCB-206ENST00000614675 BAZ1BQ9UIG0 1483 aaKnown RBP40.7■■■■■ 4.11
SNCB-206ENST00000614675 RSF1Q96T23 1441 aaPredicted RBP40.67■■■■■ 4.1
SNCB-206ENST00000614675 WIZO95785 1651 aa40.66■■■■■ 4.1
SNCB-206ENST00000614675 TOP2AP11388 1531 aaKnown RBP40.2■■■■■ 4.03
SNCB-206ENST00000614675 NESP48681 1621 aa39.99■■■■□ 3.99
SNCB-206ENST00000614675 LAMC3Q9Y6N6 1575 aa39.85■■■■□ 3.97
SNCB-206ENST00000614675 SUPT5HO00267 1087 aaKnown RBP39.82■■■■□ 3.97
SNCB-206ENST00000614675 CADPSQ9ULU8 1353 aa39.8■■■■□ 3.96
SNCB-206ENST00000614675 CCDC88BA6NC98 1476 aa39.75■■■■□ 3.95
SNCB-206ENST00000614675 ERCC6Q03468 1493 aa39.73■■■■□ 3.95
SNCB-206ENST00000614675 CFTRP13569 1480 aa39.59■■■■□ 3.93
SNCB-206ENST00000614675 PDS5BQ9NTI5 1447 aa39.59■■■■□ 3.93
SNCB-206ENST00000614675 KIF21AQ7Z4S6 1674 aa39.51■■■■□ 3.92
SNCB-206ENST00000614675 FANCD2Q9BXW9 1451 aa39.35■■■■□ 3.89
SNCB-206ENST00000614675 PRDM2Q13029 1718 aa39.32■■■■□ 3.88
SNCB-206ENST00000614675 THOC2Q8NI27 1593 aaKnown RBP39.31■■■■□ 3.88
SNCB-206ENST00000614675 CEP164Q9UPV0 1460 aa39.27■■■■□ 3.88
SNCB-206ENST00000614675 CUX2O14529 1486 aa39.21■■■■□ 3.87
SNCB-206ENST00000614675 MRC2Q9UBG0 1479 aa39.18■■■■□ 3.86
SNCB-206ENST00000614675 WDR62O43379 1518 aa39.04■■■■□ 3.84
SNCB-206ENST00000614675 URB2Q14146 1524 aaKnown RBP38.96■■■■□ 3.83
SNCB-206ENST00000614675 TOPBP1Q92547 1522 aa38.75■■■■□ 3.79
SNCB-206ENST00000614675 ABCC8Q09428 1581 aa38.71■■■■□ 3.79
SNCB-206ENST00000614675 DNMBPQ6XZF7 1577 aa38.7■■■■□ 3.79
SNCB-206ENST00000614675 CUX1P39880 1505 aa38.53■■■■□ 3.76
SNCB-206ENST00000614675 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
SNCB-206ENST00000614675 POLA1P09884 1462 aaPredicted RBP38.43■■■■□ 3.74
SNCB-206ENST00000614675 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
SNCB-206ENST00000614675 WRNQ14191 1432 aaPredicted RBP eCLIP38.33■■■■□ 3.73
SNCB-206ENST00000614675 TARBP1Q13395 1621 aaKnown RBP38.3■■■■□ 3.72
SNCB-206ENST00000614675 ZNF608Q9ULD9 1512 aaPredicted RBP38.29■■■■□ 3.72
SNCB-206ENST00000614675 RAD54L2Q9Y4B4 1467 aa38.28■■■■□ 3.72
SNCB-206ENST00000614675 SOGA1O94964 1423 aa38.27■■■■□ 3.72
SNCB-206ENST00000614675 SYNJ1O43426 1573 aa38.25■■■■□ 3.71
SNCB-206ENST00000614675 TOP2BQ02880 1626 aa38.23■■■■□ 3.71
SNCB-206ENST00000614675 BIVM-ERCC5R4GMW8 1640 aa38.22■■■■□ 3.71
SNCB-206ENST00000614675 EIF4G3O43432 1585 aaKnown RBP38.13■■■■□ 3.69
SNCB-206ENST00000614675 AQRO60306 1485 aaKnown RBP eCLIP38.1■■■■□ 3.69
SNCB-206ENST00000614675 TDRD9Q8NDG6 1382 aaKnown RBP38.07■■■■□ 3.68
SNCB-206ENST00000614675 WDR97A6NE52 1622 aa38.03■■■■□ 3.68
SNCB-206ENST00000614675 ABCA10Q8WWZ4 1543 aa37.99■■■■□ 3.67
SNCB-206ENST00000614675 DNAJC5Q9H3Z4 198 aa37.85■■■■□ 3.65
SNCB-206ENST00000614675 GAPVD1Q14C86 1478 aa37.84■■■■□ 3.65
SNCB-206ENST00000614675 ABCA5Q8WWZ7 1642 aa37.83■■■■□ 3.65
SNCB-206ENST00000614675 GRIN2BQ13224 1484 aa37.79■■■■□ 3.64
SNCB-206ENST00000614675 PBRM1Q86U86 1689 aa37.74■■■■□ 3.63
SNCB-206ENST00000614675 SNAPC4Q5SXM2 1469 aa37.74■■■■□ 3.63
SNCB-206ENST00000614675 MAGI1Q96QZ7 1491 aaPredicted RBP37.67■■■■□ 3.62
SNCB-206ENST00000614675 OSCARQ8IYS5 282 aa37.66■■■■□ 3.62
SNCB-206ENST00000614675 CHD1O14646 1710 aa37.64■■■■□ 3.62
SNCB-206ENST00000614675 FBLN2P98095 1184 aa37.62■■■■□ 3.61
SNCB-206ENST00000614675 TRIM41Q8WV44 630 aa37.57■■■■□ 3.6
SNCB-206ENST00000614675 SYNJ2O15056 1496 aa37.53■■■■□ 3.6
SNCB-206ENST00000614675 ERICH3Q5RHP9 1530 aa37.52■■■■□ 3.6
SNCB-206ENST00000614675 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
SNCB-206ENST00000614675 KIF27Q86VH2 1401 aa37.51■■■■□ 3.59
SNCB-206ENST00000614675 ADAMTS12P58397 1594 aa37.45■■■■□ 3.59
SNCB-206ENST00000614675 FHAD1B1AJZ9 1412 aa37.39■■■■□ 3.58
SNCB-206ENST00000614675 IGF1RP08069 1367 aa37.35■■■■□ 3.57
SNCB-206ENST00000614675 GRIN2AQ12879 1464 aa37.31■■■■□ 3.56
SNCB-206ENST00000614675 RUSC2Q8N2Y8 1516 aa37.28■■■■□ 3.56
SNCB-206ENST00000614675 CHIC1Q5VXU3 224 aa37.25■■■■□ 3.55
SNCB-206ENST00000614675 CUL7Q14999 1698 aa37.21■■■■□ 3.55
SNCB-206ENST00000614675 CLASP1Q7Z460 1538 aa37.2■■■■□ 3.55
SNCB-206ENST00000614675 NUP160Q12769 1436 aa37.14■■■■□ 3.54
SNCB-206ENST00000614675 CARMIL1Q5VZK9 1371 aa37.14■■■■□ 3.54
SNCB-206ENST00000614675 CEP170Q5SW79 1584 aa37.14■■■■□ 3.54
SNCB-206ENST00000614675 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
SNCB-206ENST00000614675 RIMBP3CA6NJZ7 1639 aa37.05■■■■□ 3.52
SNCB-206ENST00000614675 RIMBP3BA6NNM3 1639 aa37.05■■■■□ 3.52
SNCB-206ENST00000614675 RIMBP3Q9UFD9 1639 aa37.05■■■■□ 3.52
SNCB-206ENST00000614675 RAPGEF2Q9Y4G8 1499 aa36.92■■■■□ 3.5
SNCB-206ENST00000614675 EEA1Q15075 1411 aa36.87■■■■□ 3.49
SNCB-206ENST00000614675 CSRNP3Q8WYN3 585 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms