RNA–Protein interactions for RNA: ENST00000521488.1

IGHV3-19-201, Transcript of immunoglobulin heavy variable 3-19 (pseudogene), humanhuman

BASIC

Gene IGHV3-19, Length 291 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-19-201ENST00000521488 NISCHQ9Y2I1 1504 aa53.42■■■■■ 6.14
IGHV3-19-201ENST00000521488 CCDC180Q9P1Z9 1646 aa47.62■■■■■ 5.21
IGHV3-19-201ENST00000521488 ABCC9O60706 1549 aa46.51■■■■■ 5.04
IGHV3-19-201ENST00000521488 RB1CC1Q8TDY2 1594 aa44.8■■■■■ 4.76
IGHV3-19-201ENST00000521488 NACADO15069 1562 aa44.73■■■■■ 4.75
IGHV3-19-201ENST00000521488 ZCCHC6Q5VYS8 1495 aaKnown RBP44.53■■■■■ 4.72
IGHV3-19-201ENST00000521488 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
IGHV3-19-201ENST00000521488 MYO15BQ96JP2 1530 aa44.47■■■■■ 4.71
IGHV3-19-201ENST00000521488 DCAF1Q9Y4B6 1507 aa44.25■■■■■ 4.67
IGHV3-19-201ENST00000521488 UNC13AQ9UPW8 1703 aa43.79■■■■■ 4.6
IGHV3-19-201ENST00000521488 BICRAQ9NZM4 1560 aa43.41■■■■■ 4.54
IGHV3-19-201ENST00000521488 SCRIBQ14160 1630 aa43.37■■■■■ 4.53
IGHV3-19-201ENST00000521488 PABPN1Q86U42 306 aaKnown RBP eCLIP43.37■■■■■ 4.53
IGHV3-19-201ENST00000521488 SHROOM4Q9ULL8 1493 aa43.04■■■■■ 4.48
IGHV3-19-201ENST00000521488 DNAJC5BQ9UF47 199 aa42.64■■■■■ 4.42
IGHV3-19-201ENST00000521488 EIF4G1Q04637 1599 aaKnown RBP42.28■■■■■ 4.36
IGHV3-19-201ENST00000521488 CC2D2AQ9P2K1 1620 aa42.12■■■■■ 4.33
IGHV3-19-201ENST00000521488 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.29
IGHV3-19-201ENST00000521488 SMARCA4P51532 1647 aa41.5■■■■■ 4.23
IGHV3-19-201ENST00000521488 BAZ1AQ9NRL2 1556 aaPredicted RBP41.45■■■■■ 4.23
IGHV3-19-201ENST00000521488 ATAD2BQ9ULI0 1458 aa41.24■■■■■ 4.19
IGHV3-19-201ENST00000521488 SMARCA2P51531 1590 aa41.24■■■■■ 4.19
IGHV3-19-201ENST00000521488 NCAPD3P42695 1498 aa41.23■■■■■ 4.19
IGHV3-19-201ENST00000521488 MROH2BQ7Z745 1585 aa41.16■■■■■ 4.18
IGHV3-19-201ENST00000521488 PEG3Q9GZU2 1588 aa41.12■■■■■ 4.17
IGHV3-19-201ENST00000521488 HMGXB3Q12766 1538 aa41.08■■■■■ 4.17
IGHV3-19-201ENST00000521488 BAZ1BQ9UIG0 1483 aaKnown RBP40.92■■■■■ 4.14
IGHV3-19-201ENST00000521488 WIZO95785 1651 aa40.73■■■■■ 4.11
IGHV3-19-201ENST00000521488 RSF1Q96T23 1441 aaPredicted RBP40.65■■■■■ 4.1
IGHV3-19-201ENST00000521488 TOP2AP11388 1531 aaKnown RBP40.33■■■■■ 4.05
IGHV3-19-201ENST00000521488 NESP48681 1621 aa40.24■■■■■ 4.03
IGHV3-19-201ENST00000521488 LAMC3Q9Y6N6 1575 aa40.2■■■■■ 4.03
IGHV3-19-201ENST00000521488 ERCC6Q03468 1493 aa40.12■■■■■ 4.01
IGHV3-19-201ENST00000521488 CADPSQ9ULU8 1353 aa40■■■■□ 3.99
IGHV3-19-201ENST00000521488 PDS5BQ9NTI5 1447 aa39.89■■■■□ 3.98
IGHV3-19-201ENST00000521488 KIF21AQ7Z4S6 1674 aa39.83■■■■□ 3.97
IGHV3-19-201ENST00000521488 CCDC88BA6NC98 1476 aa39.79■■■■□ 3.96
IGHV3-19-201ENST00000521488 CFTRP13569 1480 aa39.79■■■■□ 3.96
IGHV3-19-201ENST00000521488 CUX2O14529 1486 aa39.75■■■■□ 3.95
IGHV3-19-201ENST00000521488 THOC2Q8NI27 1593 aaKnown RBP39.72■■■■□ 3.95
IGHV3-19-201ENST00000521488 PRDM2Q13029 1718 aa39.59■■■■□ 3.93
IGHV3-19-201ENST00000521488 FANCD2Q9BXW9 1451 aa39.57■■■■□ 3.93
IGHV3-19-201ENST00000521488 CEP164Q9UPV0 1460 aa39.56■■■■□ 3.92
IGHV3-19-201ENST00000521488 MRC2Q9UBG0 1479 aa39.5■■■■□ 3.91
IGHV3-19-201ENST00000521488 SUPT5HO00267 1087 aaKnown RBP39.49■■■■□ 3.91
IGHV3-19-201ENST00000521488 WDR62O43379 1518 aa39.4■■■■□ 3.9
IGHV3-19-201ENST00000521488 URB2Q14146 1524 aaKnown RBP39.18■■■■□ 3.86
IGHV3-19-201ENST00000521488 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
IGHV3-19-201ENST00000521488 TOPBP1Q92547 1522 aa38.94■■■■□ 3.82
IGHV3-19-201ENST00000521488 DNMBPQ6XZF7 1577 aa38.93■■■■□ 3.82
IGHV3-19-201ENST00000521488 IFT140Q96RY7 1462 aa38.72■■■■□ 3.79
IGHV3-19-201ENST00000521488 CUX1P39880 1505 aa38.63■■■■□ 3.77
IGHV3-19-201ENST00000521488 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
IGHV3-19-201ENST00000521488 TARBP1Q13395 1621 aaKnown RBP38.54■■■■□ 3.76
IGHV3-19-201ENST00000521488 FGD5Q6ZNL6 1462 aa38.51■■■■□ 3.76
IGHV3-19-201ENST00000521488 ZNF608Q9ULD9 1512 aaPredicted RBP38.51■■■■□ 3.76
IGHV3-19-201ENST00000521488 DNAJC5Q9H3Z4 198 aa38.48■■■■□ 3.75
IGHV3-19-201ENST00000521488 EIF4G3O43432 1585 aaKnown RBP38.44■■■■□ 3.74
IGHV3-19-201ENST00000521488 SOGA1O94964 1423 aa38.41■■■■□ 3.74
IGHV3-19-201ENST00000521488 RAD54L2Q9Y4B4 1467 aa38.4■■■■□ 3.74
IGHV3-19-201ENST00000521488 WRNQ14191 1432 aaPredicted RBP eCLIP38.35■■■■□ 3.73
IGHV3-19-201ENST00000521488 BIVM-ERCC5R4GMW8 1640 aa38.34■■■■□ 3.73
IGHV3-19-201ENST00000521488 TOP2BQ02880 1626 aa38.32■■■■□ 3.73
IGHV3-19-201ENST00000521488 WDR97A6NE52 1622 aa38.3■■■■□ 3.72
IGHV3-19-201ENST00000521488 SYNJ1O43426 1573 aa38.28■■■■□ 3.72
IGHV3-19-201ENST00000521488 AQRO60306 1485 aaKnown RBP eCLIP38.27■■■■□ 3.72
IGHV3-19-201ENST00000521488 TDRD9Q8NDG6 1382 aaKnown RBP38.17■■■■□ 3.7
IGHV3-19-201ENST00000521488 ABCA10Q8WWZ4 1543 aa38.15■■■■□ 3.7
IGHV3-19-201ENST00000521488 ABCA5Q8WWZ7 1642 aa38.04■■■■□ 3.68
IGHV3-19-201ENST00000521488 GRIN2BQ13224 1484 aa38.01■■■■□ 3.67
IGHV3-19-201ENST00000521488 PBRM1Q86U86 1689 aa37.99■■■■□ 3.67
IGHV3-19-201ENST00000521488 GAPVD1Q14C86 1478 aa37.99■■■■□ 3.67
IGHV3-19-201ENST00000521488 OSCARQ8IYS5 282 aa37.99■■■■□ 3.67
IGHV3-19-201ENST00000521488 SNAPC4Q5SXM2 1469 aa37.96■■■■□ 3.67
IGHV3-19-201ENST00000521488 CHD1O14646 1710 aa37.95■■■■□ 3.67
IGHV3-19-201ENST00000521488 MAGI1Q96QZ7 1491 aaPredicted RBP37.94■■■■□ 3.66
IGHV3-19-201ENST00000521488 SYNJ2O15056 1496 aa37.77■■■■□ 3.64
IGHV3-19-201ENST00000521488 FBLN2P98095 1184 aa37.77■■■■□ 3.64
IGHV3-19-201ENST00000521488 ERICH3Q5RHP9 1530 aa37.71■■■■□ 3.63
IGHV3-19-201ENST00000521488 CHMP7Q8WUX9 453 aaPredicted RBP37.68■■■■□ 3.62
IGHV3-19-201ENST00000521488 ADAMTS12P58397 1594 aa37.68■■■■□ 3.62
IGHV3-19-201ENST00000521488 FHAD1B1AJZ9 1412 aa37.56■■■■□ 3.6
IGHV3-19-201ENST00000521488 KIF27Q86VH2 1401 aa37.55■■■■□ 3.6
IGHV3-19-201ENST00000521488 CLASP1Q7Z460 1538 aa37.54■■■■□ 3.6
IGHV3-19-201ENST00000521488 GRIN2AQ12879 1464 aa37.52■■■■□ 3.6
IGHV3-19-201ENST00000521488 RIMBP3CA6NJZ7 1639 aa37.48■■■■□ 3.59
IGHV3-19-201ENST00000521488 RIMBP3BA6NNM3 1639 aa37.48■■■■□ 3.59
IGHV3-19-201ENST00000521488 RIMBP3Q9UFD9 1639 aa37.48■■■■□ 3.59
IGHV3-19-201ENST00000521488 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
IGHV3-19-201ENST00000521488 CUL7Q14999 1698 aa37.39■■■■□ 3.58
IGHV3-19-201ENST00000521488 NUP160Q12769 1436 aa37.36■■■■□ 3.57
IGHV3-19-201ENST00000521488 CEP170Q5SW79 1584 aa37.35■■■■□ 3.57
IGHV3-19-201ENST00000521488 IGF1RP08069 1367 aa37.35■■■■□ 3.57
IGHV3-19-201ENST00000521488 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
IGHV3-19-201ENST00000521488 ARAP1Q96P48 1450 aa37.15■■■■□ 3.54
IGHV3-19-201ENST00000521488 CARMIL1Q5VZK9 1371 aa37.15■■■■□ 3.54
IGHV3-19-201ENST00000521488 RUSC2Q8N2Y8 1516 aa37.15■■■■□ 3.54
IGHV3-19-201ENST00000521488 SHROOM2Q13796 1616 aa37.13■■■■□ 3.53
IGHV3-19-201ENST00000521488 CYB5RLQ6IPT4 315 aa37.01■■■■□ 3.52
IGHV3-19-201ENST00000521488 KIAA0586Q9BVV6 1533 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms