Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 KRT18P61-201ENST00000585825 1298 ntBASIC31.96■■■□□ 2.71
XRN1Q8IZH2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
XRN1Q8IZH2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
XRN1Q8IZH2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.95■■■□□ 2.71
XRN1Q8IZH2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.95■■■□□ 2.7
XRN1Q8IZH2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.94■■■□□ 2.7
XRN1Q8IZH2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
XRN1Q8IZH2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.94■■■□□ 2.7
XRN1Q8IZH2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
XRN1Q8IZH2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
XRN1Q8IZH2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
XRN1Q8IZH2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
XRN1Q8IZH2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.92■■■□□ 2.7
XRN1Q8IZH2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
XRN1Q8IZH2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
XRN1Q8IZH2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.92■■■□□ 2.7
XRN1Q8IZH2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
XRN1Q8IZH2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
XRN1Q8IZH2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
XRN1Q8IZH2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.9■■■□□ 2.7
XRN1Q8IZH2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.9■■■□□ 2.7
XRN1Q8IZH2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.9■■■□□ 2.7
XRN1Q8IZH2 HLA-L-209ENST00000420110 1011 ntBASIC31.89■■■□□ 2.7
XRN1Q8IZH2 RAP2CP1-201ENST00000605103 478 ntBASIC31.89■■■□□ 2.7
XRN1Q8IZH2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
XRN1Q8IZH2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.89■■■□□ 2.69
XRN1Q8IZH2 AC010525.1-201ENST00000585559 441 ntBASIC31.89■■■□□ 2.69
XRN1Q8IZH2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.89■■■□□ 2.69
XRN1Q8IZH2 AC141586.4-201ENST00000624558 1573 ntBASIC31.89■■■□□ 2.69
XRN1Q8IZH2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
XRN1Q8IZH2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
XRN1Q8IZH2 OR2I1P-207ENST00000453522 948 ntBASIC31.88■■■□□ 2.69
XRN1Q8IZH2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
XRN1Q8IZH2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
XRN1Q8IZH2 AL161729.1-201ENST00000604104 1402 ntBASIC31.88■■■□□ 2.69
XRN1Q8IZH2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
XRN1Q8IZH2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
XRN1Q8IZH2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
XRN1Q8IZH2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
XRN1Q8IZH2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
XRN1Q8IZH2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.83■■■□□ 2.69
XRN1Q8IZH2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
XRN1Q8IZH2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
XRN1Q8IZH2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
XRN1Q8IZH2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
XRN1Q8IZH2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.82■■■□□ 2.68
XRN1Q8IZH2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
XRN1Q8IZH2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms