RNA–Protein interactions for RNA: ENST00000340717.4

RASEF-201, Transcript of RAS and EF-hand domain containing, humanhuman

TSL 2 BASIC

Gene RASEF, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASEF-201ENST00000340717 NISCHQ9Y2I1 1504 aa53.23■■■■■ 6.11
RASEF-201ENST00000340717 CCDC180Q9P1Z9 1646 aa46.8■■■■■ 5.08
RASEF-201ENST00000340717 ABCC9O60706 1549 aa45.26■■■■■ 4.84
RASEF-201ENST00000340717 DCAF8L2P0C7V8 631 aa44.53■■■■■ 4.72
RASEF-201ENST00000340717 ZCCHC6Q5VYS8 1495 aaKnown RBP44.49■■■■■ 4.71
RASEF-201ENST00000340717 DCAF1Q9Y4B6 1507 aa43.95■■■■■ 4.63
RASEF-201ENST00000340717 NACADO15069 1562 aa43.87■■■■■ 4.61
RASEF-201ENST00000340717 MYO15BQ96JP2 1530 aa43.79■■■■■ 4.6
RASEF-201ENST00000340717 RB1CC1Q8TDY2 1594 aa43.75■■■■■ 4.59
RASEF-201ENST00000340717 SCRIBQ14160 1630 aa43■■■■■ 4.47
RASEF-201ENST00000340717 SHROOM4Q9ULL8 1493 aa42.89■■■■■ 4.46
RASEF-201ENST00000340717 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
RASEF-201ENST00000340717 PABPN1Q86U42 306 aaKnown RBP eCLIP42.55■■■■■ 4.4
RASEF-201ENST00000340717 BICRAQ9NZM4 1560 aa42.38■■■■■ 4.37
RASEF-201ENST00000340717 CECR2Q9BXF3 1484 aa41.46■■■■■ 4.23
RASEF-201ENST00000340717 EIF4G1Q04637 1599 aaKnown RBP41.23■■■■■ 4.19
RASEF-201ENST00000340717 BAZ1AQ9NRL2 1556 aaPredicted RBP41.19■■■■■ 4.18
RASEF-201ENST00000340717 SMARCA4P51532 1647 aa41.1■■■■■ 4.17
RASEF-201ENST00000340717 MROH2BQ7Z745 1585 aa41.09■■■■■ 4.17
RASEF-201ENST00000340717 RSF1Q96T23 1441 aaPredicted RBP40.95■■■■■ 4.15
RASEF-201ENST00000340717 CC2D2AQ9P2K1 1620 aa40.87■■■■■ 4.13
RASEF-201ENST00000340717 SUPT5HO00267 1087 aaKnown RBP40.84■■■■■ 4.13
RASEF-201ENST00000340717 DNAJC5BQ9UF47 199 aa40.79■■■■■ 4.12
RASEF-201ENST00000340717 WIZO95785 1651 aa40.71■■■■■ 4.11
RASEF-201ENST00000340717 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
RASEF-201ENST00000340717 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
RASEF-201ENST00000340717 PEG3Q9GZU2 1588 aa40.6■■■■■ 4.09
RASEF-201ENST00000340717 NCAPD3P42695 1498 aa40.5■■■■■ 4.07
RASEF-201ENST00000340717 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
RASEF-201ENST00000340717 HMGXB3Q12766 1538 aa40.33■■■■■ 4.05
RASEF-201ENST00000340717 TOP2AP11388 1531 aaKnown RBP40.24■■■■■ 4.03
RASEF-201ENST00000340717 CCDC88BA6NC98 1476 aa39.86■■■■□ 3.97
RASEF-201ENST00000340717 CADPSQ9ULU8 1353 aa39.45■■■■□ 3.91
RASEF-201ENST00000340717 NESP48681 1621 aa39.4■■■■□ 3.9
RASEF-201ENST00000340717 CFTRP13569 1480 aa39.35■■■■□ 3.89
RASEF-201ENST00000340717 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
RASEF-201ENST00000340717 PDS5BQ9NTI5 1447 aa39.08■■■■□ 3.85
RASEF-201ENST00000340717 FANCD2Q9BXW9 1451 aa39.01■■■■□ 3.83
RASEF-201ENST00000340717 PRDM2Q13029 1718 aa39■■■■□ 3.83
RASEF-201ENST00000340717 ERCC6Q03468 1493 aa38.95■■■■□ 3.83
RASEF-201ENST00000340717 KIF21AQ7Z4S6 1674 aa38.86■■■■□ 3.81
RASEF-201ENST00000340717 CEP164Q9UPV0 1460 aa38.86■■■■□ 3.81
RASEF-201ENST00000340717 ABCC8Q09428 1581 aa38.72■■■■□ 3.79
RASEF-201ENST00000340717 WRNQ14191 1432 aaPredicted RBP eCLIP38.61■■■■□ 3.77
RASEF-201ENST00000340717 MRC2Q9UBG0 1479 aa38.59■■■■□ 3.77
RASEF-201ENST00000340717 URB2Q14146 1524 aaKnown RBP38.53■■■■□ 3.76
RASEF-201ENST00000340717 CHIC1Q5VXU3 224 aa38.49■■■■□ 3.75
RASEF-201ENST00000340717 CUX1P39880 1505 aa38.48■■■■□ 3.75
RASEF-201ENST00000340717 THOC2Q8NI27 1593 aaKnown RBP38.45■■■■□ 3.75
RASEF-201ENST00000340717 TRIM41Q8WV44 630 aa38.45■■■■□ 3.75
RASEF-201ENST00000340717 TOPBP1Q92547 1522 aa38.45■■■■□ 3.75
RASEF-201ENST00000340717 DNMBPQ6XZF7 1577 aa38.43■■■■□ 3.74
RASEF-201ENST00000340717 SYNJ1O43426 1573 aa38.42■■■■□ 3.74
RASEF-201ENST00000340717 WDR62O43379 1518 aa38.38■■■■□ 3.73
RASEF-201ENST00000340717 TOP2BQ02880 1626 aa38.34■■■■□ 3.73
RASEF-201ENST00000340717 BIVM-ERCC5R4GMW8 1640 aa38.28■■■■□ 3.72
RASEF-201ENST00000340717 FGD5Q6ZNL6 1462 aa38.24■■■■□ 3.71
RASEF-201ENST00000340717 POLA1P09884 1462 aaPredicted RBP38.19■■■■□ 3.7
RASEF-201ENST00000340717 SOGA1O94964 1423 aa38.11■■■■□ 3.69
RASEF-201ENST00000340717 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
RASEF-201ENST00000340717 CUX2O14529 1486 aa38.07■■■■□ 3.69
RASEF-201ENST00000340717 IFT140Q96RY7 1462 aa37.97■■■■□ 3.67
RASEF-201ENST00000340717 TARBP1Q13395 1621 aaKnown RBP37.91■■■■□ 3.66
RASEF-201ENST00000340717 ABCA10Q8WWZ4 1543 aa37.85■■■■□ 3.65
RASEF-201ENST00000340717 TDRD9Q8NDG6 1382 aaKnown RBP37.85■■■■□ 3.65
RASEF-201ENST00000340717 ZNF608Q9ULD9 1512 aaPredicted RBP37.81■■■■□ 3.64
RASEF-201ENST00000340717 FAM9AQ8IZU1 332 aaPredicted RBP37.75■■■■□ 3.63
RASEF-201ENST00000340717 AQRO60306 1485 aaKnown RBP eCLIP37.75■■■■□ 3.63
RASEF-201ENST00000340717 WDR97A6NE52 1622 aa37.74■■■■□ 3.63
RASEF-201ENST00000340717 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
RASEF-201ENST00000340717 RUSC2Q8N2Y8 1516 aa37.71■■■■□ 3.63
RASEF-201ENST00000340717 GAPVD1Q14C86 1478 aa37.65■■■■□ 3.62
RASEF-201ENST00000340717 EIF4G3O43432 1585 aaKnown RBP37.62■■■■□ 3.61
RASEF-201ENST00000340717 ABCA5Q8WWZ7 1642 aa37.59■■■■□ 3.61
RASEF-201ENST00000340717 EEA1Q15075 1411 aa37.51■■■■□ 3.59
RASEF-201ENST00000340717 GRIN2BQ13224 1484 aa37.5■■■■□ 3.59
RASEF-201ENST00000340717 CSRNP3Q8WYN3 585 aa37.49■■■■□ 3.59
RASEF-201ENST00000340717 IGF1RP08069 1367 aa37.48■■■■□ 3.59
RASEF-201ENST00000340717 PBRM1Q86U86 1689 aa37.43■■■■□ 3.58
RASEF-201ENST00000340717 ERICH3Q5RHP9 1530 aa37.4■■■■□ 3.58
RASEF-201ENST00000340717 SNAPC4Q5SXM2 1469 aa37.36■■■■□ 3.57
RASEF-201ENST00000340717 EHMT2Q96KQ7 1210 aa37.32■■■■□ 3.56
RASEF-201ENST00000340717 CARMIL1Q5VZK9 1371 aa37.3■■■■□ 3.56
RASEF-201ENST00000340717 FBLN2P98095 1184 aa37.29■■■■□ 3.56
RASEF-201ENST00000340717 MAGI1Q96QZ7 1491 aaPredicted RBP37.27■■■■□ 3.56
RASEF-201ENST00000340717 CHMP7Q8WUX9 453 aaPredicted RBP37.23■■■■□ 3.55
RASEF-201ENST00000340717 FHAD1B1AJZ9 1412 aa37.22■■■■□ 3.55
RASEF-201ENST00000340717 CUL7Q14999 1698 aa37.21■■■■□ 3.55
RASEF-201ENST00000340717 ADAMTS12P58397 1594 aa37.18■■■■□ 3.54
RASEF-201ENST00000340717 PRXQ9BXM0 1461 aa37.16■■■■□ 3.54
RASEF-201ENST00000340717 SYNJ2O15056 1496 aa37.14■■■■□ 3.54
RASEF-201ENST00000340717 RAPGEF2Q9Y4G8 1499 aa37.12■■■■□ 3.53
RASEF-201ENST00000340717 LOC105371045A0A1W2PR82 267 aa37.04■■■■□ 3.52
RASEF-201ENST00000340717 KIF21BO75037 1637 aa37.02■■■■□ 3.52
RASEF-201ENST00000340717 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
RASEF-201ENST00000340717 UBTFP17480 764 aaKnown RBP37■■■■□ 3.51
RASEF-201ENST00000340717 CHD1O14646 1710 aa36.98■■■■□ 3.51
RASEF-201ENST00000340717 GOLGA3Q08378 1498 aa36.97■■■■□ 3.51
RASEF-201ENST00000340717 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
RASEF-201ENST00000340717 CEP170Q5SW79 1584 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms