RNA–Protein interactions for RNA: ENST00000332029.2

SOCS1-201, Transcript of suppressor of cytokine signaling 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS1, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS1-201ENST00000332029 NISCHQ9Y2I1 1504 aa52.86■■■■■ 6.05
SOCS1-201ENST00000332029 ABCC9O60706 1549 aa47.52■■■■■ 5.2
SOCS1-201ENST00000332029 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
SOCS1-201ENST00000332029 RB1CC1Q8TDY2 1594 aa45.2■■■■■ 4.83
SOCS1-201ENST00000332029 NACADO15069 1562 aa44.88■■■■■ 4.78
SOCS1-201ENST00000332029 DCAF8L2P0C7V8 631 aa44.66■■■■■ 4.74
SOCS1-201ENST00000332029 DNAJC5BQ9UF47 199 aa44.63■■■■■ 4.74
SOCS1-201ENST00000332029 PABPN1Q86U42 306 aaKnown RBP eCLIP44.26■■■■■ 4.68
SOCS1-201ENST00000332029 MYO15BQ96JP2 1530 aa44.25■■■■■ 4.67
SOCS1-201ENST00000332029 UNC13AQ9UPW8 1703 aa44.09■■■■■ 4.65
SOCS1-201ENST00000332029 BICRAQ9NZM4 1560 aa43.88■■■■■ 4.61
SOCS1-201ENST00000332029 ZCCHC6Q5VYS8 1495 aaKnown RBP43.81■■■■■ 4.6
SOCS1-201ENST00000332029 DCAF1Q9Y4B6 1507 aa43.67■■■■■ 4.58
SOCS1-201ENST00000332029 SHROOM4Q9ULL8 1493 aa43.32■■■■■ 4.53
SOCS1-201ENST00000332029 SCRIBQ14160 1630 aa43.24■■■■■ 4.51
SOCS1-201ENST00000332029 CC2D2AQ9P2K1 1620 aa42.91■■■■■ 4.46
SOCS1-201ENST00000332029 CECR2Q9BXF3 1484 aa42.83■■■■■ 4.45
SOCS1-201ENST00000332029 EIF4G1Q04637 1599 aaKnown RBP42.82■■■■■ 4.44
SOCS1-201ENST00000332029 NCAPD3P42695 1498 aa41.45■■■■■ 4.23
SOCS1-201ENST00000332029 ATAD2BQ9ULI0 1458 aa41.32■■■■■ 4.2
SOCS1-201ENST00000332029 SMARCA4P51532 1647 aa41.24■■■■■ 4.19
SOCS1-201ENST00000332029 SMARCA2P51531 1590 aa41.19■■■■■ 4.18
SOCS1-201ENST00000332029 HMGXB3Q12766 1538 aa41.13■■■■■ 4.17
SOCS1-201ENST00000332029 ERCC6Q03468 1493 aa41.06■■■■■ 4.16
SOCS1-201ENST00000332029 BAZ1AQ9NRL2 1556 aaPredicted RBP41.04■■■■■ 4.16
SOCS1-201ENST00000332029 DNAJC5Q9H3Z4 198 aa41.03■■■■■ 4.16
SOCS1-201ENST00000332029 CUX2O14529 1486 aa40.99■■■■■ 4.15
SOCS1-201ENST00000332029 BAZ1BQ9UIG0 1483 aaKnown RBP40.92■■■■■ 4.14
SOCS1-201ENST00000332029 PEG3Q9GZU2 1588 aa40.84■■■■■ 4.13
SOCS1-201ENST00000332029 NESP48681 1621 aa40.81■■■■■ 4.12
SOCS1-201ENST00000332029 MROH2BQ7Z745 1585 aa40.74■■■■■ 4.11
SOCS1-201ENST00000332029 LAMC3Q9Y6N6 1575 aa40.51■■■■■ 4.08
SOCS1-201ENST00000332029 THOC2Q8NI27 1593 aaKnown RBP40.39■■■■■ 4.06
SOCS1-201ENST00000332029 PDS5BQ9NTI5 1447 aa40.31■■■■■ 4.04
SOCS1-201ENST00000332029 KIF21AQ7Z4S6 1674 aa40.23■■■■■ 4.03
SOCS1-201ENST00000332029 WIZO95785 1651 aa40.21■■■■■ 4.03
SOCS1-201ENST00000332029 CADPSQ9ULU8 1353 aa40.2■■■■■ 4.03
SOCS1-201ENST00000332029 MRC2Q9UBG0 1479 aa39.95■■■■□ 3.99
SOCS1-201ENST00000332029 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
SOCS1-201ENST00000332029 WDR62O43379 1518 aa39.85■■■■□ 3.97
SOCS1-201ENST00000332029 CEP164Q9UPV0 1460 aa39.79■■■■□ 3.96
SOCS1-201ENST00000332029 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
SOCS1-201ENST00000332029 TOP2AP11388 1531 aaKnown RBP39.74■■■■□ 3.95
SOCS1-201ENST00000332029 CFTRP13569 1480 aa39.72■■■■□ 3.95
SOCS1-201ENST00000332029 URB2Q14146 1524 aaKnown RBP39.41■■■■□ 3.9
SOCS1-201ENST00000332029 CCDC88BA6NC98 1476 aa39.3■■■■□ 3.88
SOCS1-201ENST00000332029 TRIM41Q8WV44 630 aa39.22■■■■□ 3.87
SOCS1-201ENST00000332029 PRDM2Q13029 1718 aa39.22■■■■□ 3.87
SOCS1-201ENST00000332029 OSCARQ8IYS5 282 aa39.12■■■■□ 3.85
SOCS1-201ENST00000332029 IFT140Q96RY7 1462 aa39■■■■□ 3.83
SOCS1-201ENST00000332029 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
SOCS1-201ENST00000332029 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
SOCS1-201ENST00000332029 ABCC8Q09428 1581 aa38.88■■■■□ 3.81
SOCS1-201ENST00000332029 DNMBPQ6XZF7 1577 aa38.82■■■■□ 3.8
SOCS1-201ENST00000332029 EIF4G3O43432 1585 aaKnown RBP38.7■■■■□ 3.79
SOCS1-201ENST00000332029 TARBP1Q13395 1621 aaKnown RBP38.6■■■■□ 3.77
SOCS1-201ENST00000332029 RIMBP3CA6NJZ7 1639 aa38.58■■■■□ 3.77
SOCS1-201ENST00000332029 RIMBP3BA6NNM3 1639 aa38.58■■■■□ 3.77
SOCS1-201ENST00000332029 RIMBP3Q9UFD9 1639 aa38.58■■■■□ 3.77
SOCS1-201ENST00000332029 AQRO60306 1485 aaKnown RBP eCLIP38.58■■■■□ 3.774e-7■■■■□ 20.9
SOCS1-201ENST00000332029 POLA1P09884 1462 aaPredicted RBP38.58■■■■□ 3.77
SOCS1-201ENST00000332029 ARHGEF11O15085 1522 aa38.48■■■■□ 3.75
SOCS1-201ENST00000332029 RAD54L2Q9Y4B4 1467 aa38.44■■■■□ 3.74
SOCS1-201ENST00000332029 SOGA1O94964 1423 aa38.4■■■■□ 3.74
SOCS1-201ENST00000332029 CHD1O14646 1710 aa38.38■■■■□ 3.73
SOCS1-201ENST00000332029 FBLN2P98095 1184 aa38.35■■■■□ 3.73
SOCS1-201ENST00000332029 TDRD9Q8NDG6 1382 aaKnown RBP38.34■■■■□ 3.73
SOCS1-201ENST00000332029 FGD5Q6ZNL6 1462 aa38.33■■■■□ 3.73
SOCS1-201ENST00000332029 CUX1P39880 1505 aa38.28■■■■□ 3.72
SOCS1-201ENST00000332029 WDR97A6NE52 1622 aa38.23■■■■□ 3.71
SOCS1-201ENST00000332029 CYB5RLQ6IPT4 315 aa38.2■■■■□ 3.71
SOCS1-201ENST00000332029 SNAPC4Q5SXM2 1469 aa38.19■■■■□ 3.7
SOCS1-201ENST00000332029 ARAP1Q96P48 1450 aa38.1■■■■□ 3.69
SOCS1-201ENST00000332029 SUPT5HO00267 1087 aaKnown RBP38.09■■■■□ 3.69
SOCS1-201ENST00000332029 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
SOCS1-201ENST00000332029 GRIN2BQ13224 1484 aa38.08■■■■□ 3.69
SOCS1-201ENST00000332029 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
SOCS1-201ENST00000332029 CLASP1Q7Z460 1538 aa37.99■■■■□ 3.67
SOCS1-201ENST00000332029 SYNJ1O43426 1573 aa37.97■■■■□ 3.67
SOCS1-201ENST00000332029 SYNJ2O15056 1496 aa37.96■■■■□ 3.67
SOCS1-201ENST00000332029 GAPVD1Q14C86 1478 aa37.94■■■■□ 3.66
SOCS1-201ENST00000332029 ABCA10Q8WWZ4 1543 aa37.89■■■■□ 3.66
SOCS1-201ENST00000332029 PBRM1Q86U86 1689 aa37.86■■■■□ 3.65
SOCS1-201ENST00000332029 ABCA5Q8WWZ7 1642 aa37.82■■■■□ 3.64
SOCS1-201ENST00000332029 TRHP20396 242 aaPredicted RBP37.81■■■■□ 3.64
SOCS1-201ENST00000332029 WRNQ14191 1432 aaPredicted RBP eCLIP37.74■■■■□ 3.63
SOCS1-201ENST00000332029 TOP2BQ02880 1626 aa37.64■■■■□ 3.62
SOCS1-201ENST00000332029 BIVM-ERCC5R4GMW8 1640 aa37.62■■■■□ 3.61
SOCS1-201ENST00000332029 GRIN2AQ12879 1464 aa37.58■■■■□ 3.61
SOCS1-201ENST00000332029 ADAMTS12P58397 1594 aa37.55■■■■□ 3.6
SOCS1-201ENST00000332029 NUP160Q12769 1436 aa37.47■■■■□ 3.59
SOCS1-201ENST00000332029 FHAD1B1AJZ9 1412 aa37.46■■■■□ 3.59
SOCS1-201ENST00000332029 CEP170Q5SW79 1584 aa37.44■■■■□ 3.58
SOCS1-201ENST00000332029 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
SOCS1-201ENST00000332029 ERCC6L2Q5T890 1561 aa37.38■■■■□ 3.58
SOCS1-201ENST00000332029 SHROOM2Q13796 1616 aa37.27■■■■□ 3.56
SOCS1-201ENST00000332029 PRG4Q92954 1404 aaPredicted RBP37.11■■■■□ 3.53
SOCS1-201ENST00000332029 JPH4Q96JJ6 628 aa37.09■■■■□ 3.53
SOCS1-201ENST00000332029 RUSC2Q8N2Y8 1516 aa37.01■■■■□ 3.52
SOCS1-201ENST00000332029 KIF27Q86VH2 1401 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms