RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 NISCHQ9Y2I1 1504 aa52.97■■■■■ 6.07
CKLF-205ENST00000417030 CCDC180Q9P1Z9 1646 aa47.16■■■■■ 5.14
CKLF-205ENST00000417030 ABCC9O60706 1549 aa46.45■■■■■ 5.03
CKLF-205ENST00000417030 RB1CC1Q8TDY2 1594 aa44.58■■■■■ 4.73
CKLF-205ENST00000417030 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
CKLF-205ENST00000417030 NACADO15069 1562 aa44.48■■■■■ 4.71
CKLF-205ENST00000417030 MYO15BQ96JP2 1530 aa44.13■■■■■ 4.65
CKLF-205ENST00000417030 ZCCHC6Q5VYS8 1495 aaKnown RBP44.02■■■■■ 4.64
CKLF-205ENST00000417030 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
CKLF-205ENST00000417030 UNC13AQ9UPW8 1703 aa43.45■■■■■ 4.55
CKLF-205ENST00000417030 PABPN1Q86U42 306 aaKnown RBP eCLIP43.42■■■■■ 4.54
CKLF-205ENST00000417030 BICRAQ9NZM4 1560 aa43.18■■■■■ 4.5
CKLF-205ENST00000417030 SCRIBQ14160 1630 aa43■■■■■ 4.47
CKLF-205ENST00000417030 DNAJC5BQ9UF47 199 aa42.93■■■■■ 4.46
CKLF-205ENST00000417030 SHROOM4Q9ULL8 1493 aa42.77■■■■■ 4.44
CKLF-205ENST00000417030 EIF4G1Q04637 1599 aaKnown RBP42.09■■■■■ 4.33
CKLF-205ENST00000417030 CC2D2AQ9P2K1 1620 aa41.98■■■■■ 4.31
CKLF-205ENST00000417030 CECR2Q9BXF3 1484 aa41.79■■■■■ 4.28
CKLF-205ENST00000417030 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
CKLF-205ENST00000417030 BAZ1AQ9NRL2 1556 aaPredicted RBP41.08■■■■■ 4.17
CKLF-205ENST00000417030 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
CKLF-205ENST00000417030 ATAD2BQ9ULI0 1458 aa41.02■■■■■ 4.16
CKLF-205ENST00000417030 SMARCA2P51531 1590 aa40.95■■■■■ 4.15
CKLF-205ENST00000417030 MROH2BQ7Z745 1585 aa40.79■■■■■ 4.12
CKLF-205ENST00000417030 HMGXB3Q12766 1538 aa40.77■■■■■ 4.12
CKLF-205ENST00000417030 PEG3Q9GZU2 1588 aa40.74■■■■■ 4.11
CKLF-205ENST00000417030 BAZ1BQ9UIG0 1483 aaKnown RBP40.66■■■■■ 4.1
CKLF-205ENST00000417030 WIZO95785 1651 aa40.31■■■■■ 4.04
CKLF-205ENST00000417030 RSF1Q96T23 1441 aaPredicted RBP40.27■■■■■ 4.04
CKLF-205ENST00000417030 NESP48681 1621 aa40.09■■■■■ 4.01
CKLF-205ENST00000417030 ERCC6Q03468 1493 aa40.09■■■■■ 4.01
CKLF-205ENST00000417030 LAMC3Q9Y6N6 1575 aa39.99■■■■□ 3.99
CKLF-205ENST00000417030 TOP2AP11388 1531 aaKnown RBP39.89■■■■□ 3.98
CKLF-205ENST00000417030 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
CKLF-205ENST00000417030 PDS5BQ9NTI5 1447 aa39.8■■■■□ 3.96
CKLF-205ENST00000417030 CUX2O14529 1486 aa39.76■■■■□ 3.96
CKLF-205ENST00000417030 KIF21AQ7Z4S6 1674 aa39.56■■■■□ 3.92
CKLF-205ENST00000417030 CFTRP13569 1480 aa39.54■■■■□ 3.92
CKLF-205ENST00000417030 THOC2Q8NI27 1593 aaKnown RBP39.5■■■■□ 3.91
CKLF-205ENST00000417030 CCDC88BA6NC98 1476 aa39.47■■■■□ 3.91
CKLF-205ENST00000417030 FANCD2Q9BXW9 1451 aa39.37■■■■□ 3.89
CKLF-205ENST00000417030 SUPT5HO00267 1087 aaKnown RBP39.36■■■■□ 3.89
CKLF-205ENST00000417030 MRC2Q9UBG0 1479 aa39.34■■■■□ 3.89
CKLF-205ENST00000417030 CEP164Q9UPV0 1460 aa39.34■■■■□ 3.89
CKLF-205ENST00000417030 WDR62O43379 1518 aa39.19■■■■□ 3.86
CKLF-205ENST00000417030 PRDM2Q13029 1718 aa39.11■■■■□ 3.85
CKLF-205ENST00000417030 URB2Q14146 1524 aaKnown RBP38.95■■■■□ 3.83
CKLF-205ENST00000417030 DNAJC5Q9H3Z4 198 aa38.95■■■■□ 3.83
CKLF-205ENST00000417030 ABCC8Q09428 1581 aa38.76■■■■□ 3.8
CKLF-205ENST00000417030 TOPBP1Q92547 1522 aa38.69■■■■□ 3.78
CKLF-205ENST00000417030 DNMBPQ6XZF7 1577 aa38.61■■■■□ 3.77
CKLF-205ENST00000417030 IFT140Q96RY7 1462 aa38.55■■■■□ 3.76
CKLF-205ENST00000417030 ZNF608Q9ULD9 1512 aaPredicted RBP38.35■■■■□ 3.73
CKLF-205ENST00000417030 POLA1P09884 1462 aaPredicted RBP38.34■■■■□ 3.73
CKLF-205ENST00000417030 CUX1P39880 1505 aa38.28■■■■□ 3.72
CKLF-205ENST00000417030 TARBP1Q13395 1621 aaKnown RBP38.27■■■■□ 3.72
CKLF-205ENST00000417030 SOGA1O94964 1423 aa38.26■■■■□ 3.72
CKLF-205ENST00000417030 FGD5Q6ZNL6 1462 aa38.21■■■■□ 3.71
CKLF-205ENST00000417030 RAD54L2Q9Y4B4 1467 aa38.18■■■■□ 3.7
CKLF-205ENST00000417030 OSCARQ8IYS5 282 aa38.18■■■■□ 3.7
CKLF-205ENST00000417030 AQRO60306 1485 aaKnown RBP eCLIP38.15■■■■□ 3.7
CKLF-205ENST00000417030 EIF4G3O43432 1585 aaKnown RBP38.14■■■■□ 3.7
CKLF-205ENST00000417030 TDRD9Q8NDG6 1382 aaKnown RBP38.06■■■■□ 3.68
CKLF-205ENST00000417030 WRNQ14191 1432 aaPredicted RBP eCLIP37.98■■■■□ 3.67
CKLF-205ENST00000417030 WDR97A6NE52 1622 aa37.98■■■■□ 3.67
CKLF-205ENST00000417030 TOP2BQ02880 1626 aa37.89■■■■□ 3.66
CKLF-205ENST00000417030 BIVM-ERCC5R4GMW8 1640 aa37.89■■■■□ 3.66
CKLF-205ENST00000417030 SYNJ1O43426 1573 aa37.87■■■■□ 3.65
CKLF-205ENST00000417030 ABCA10Q8WWZ4 1543 aa37.85■■■■□ 3.65
CKLF-205ENST00000417030 FBLN2P98095 1184 aa37.82■■■■□ 3.64
CKLF-205ENST00000417030 GRIN2BQ13224 1484 aa37.81■■■■□ 3.64
CKLF-205ENST00000417030 GAPVD1Q14C86 1478 aa37.77■■■■□ 3.64
CKLF-205ENST00000417030 SNAPC4Q5SXM2 1469 aa37.75■■■■□ 3.63
CKLF-205ENST00000417030 MAGI1Q96QZ7 1491 aaPredicted RBP37.72■■■■□ 3.63
CKLF-205ENST00000417030 CHD1O14646 1710 aa37.7■■■■□ 3.63
CKLF-205ENST00000417030 CHMP7Q8WUX9 453 aaPredicted RBP37.69■■■■□ 3.62
CKLF-205ENST00000417030 ABCA5Q8WWZ7 1642 aa37.65■■■■□ 3.62
CKLF-205ENST00000417030 PBRM1Q86U86 1689 aa37.6■■■■□ 3.61
CKLF-205ENST00000417030 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
CKLF-205ENST00000417030 TRIM41Q8WV44 630 aa37.52■■■■□ 3.6
CKLF-205ENST00000417030 RIMBP3CA6NJZ7 1639 aa37.43■■■■□ 3.58
CKLF-205ENST00000417030 RIMBP3BA6NNM3 1639 aa37.43■■■■□ 3.58
CKLF-205ENST00000417030 RIMBP3Q9UFD9 1639 aa37.43■■■■□ 3.58
CKLF-205ENST00000417030 ARHGEF11O15085 1522 aa37.41■■■■□ 3.58
CKLF-205ENST00000417030 ERICH3Q5RHP9 1530 aa37.39■■■■□ 3.58
CKLF-205ENST00000417030 FHAD1B1AJZ9 1412 aa37.34■■■■□ 3.57
CKLF-205ENST00000417030 CLASP1Q7Z460 1538 aa37.33■■■■□ 3.57
CKLF-205ENST00000417030 ADAMTS12P58397 1594 aa37.31■■■■□ 3.56
CKLF-205ENST00000417030 GRIN2AQ12879 1464 aa37.29■■■■□ 3.56
CKLF-205ENST00000417030 KIF27Q86VH2 1401 aa37.25■■■■□ 3.55
CKLF-205ENST00000417030 CYB5RLQ6IPT4 315 aa37.2■■■■□ 3.55
CKLF-205ENST00000417030 NUP160Q12769 1436 aa37.14■■■■□ 3.54
CKLF-205ENST00000417030 IGF1RP08069 1367 aa37.14■■■■□ 3.54
CKLF-205ENST00000417030 ARAP1Q96P48 1450 aa37.08■■■■□ 3.53
CKLF-205ENST00000417030 CEP170Q5SW79 1584 aa37.07■■■■□ 3.52
CKLF-205ENST00000417030 CUL7Q14999 1698 aa36.96■■■■□ 3.51
CKLF-205ENST00000417030 CARMIL1Q5VZK9 1371 aa36.91■■■■□ 3.5
CKLF-205ENST00000417030 CHIC1Q5VXU3 224 aa36.9■■■■□ 3.5
CKLF-205ENST00000417030 RUSC2Q8N2Y8 1516 aa36.87■■■■□ 3.49
CKLF-205ENST00000417030 JPH4Q96JJ6 628 aa36.87■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms