RNA–Protein interactions for RNA: ENST00000621286.1

MADCAM1-208, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,203 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-208ENST00000621286 NISCHQ9Y2I1 1504 aa53.16■■■■■ 6.1
MADCAM1-208ENST00000621286 CCDC180Q9P1Z9 1646 aa47.28■■■■■ 5.16
MADCAM1-208ENST00000621286 ABCC9O60706 1549 aa46.6■■■■■ 5.05
MADCAM1-208ENST00000621286 DCAF8L2P0C7V8 631 aa44.82■■■■■ 4.77
MADCAM1-208ENST00000621286 RB1CC1Q8TDY2 1594 aa44.69■■■■■ 4.74
MADCAM1-208ENST00000621286 NACADO15069 1562 aa44.56■■■■■ 4.72
MADCAM1-208ENST00000621286 ZCCHC6Q5VYS8 1495 aaKnown RBP44.18■■■■■ 4.66
MADCAM1-208ENST00000621286 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
MADCAM1-208ENST00000621286 DCAF1Q9Y4B6 1507 aa43.9■■■■■ 4.62
MADCAM1-208ENST00000621286 UNC13AQ9UPW8 1703 aa43.59■■■■■ 4.57
MADCAM1-208ENST00000621286 PABPN1Q86U42 306 aaKnown RBP eCLIP43.59■■■■■ 4.57
MADCAM1-208ENST00000621286 BICRAQ9NZM4 1560 aa43.29■■■■■ 4.52
MADCAM1-208ENST00000621286 SCRIBQ14160 1630 aa43.22■■■■■ 4.51
MADCAM1-208ENST00000621286 DNAJC5BQ9UF47 199 aa43.21■■■■■ 4.51
MADCAM1-208ENST00000621286 SHROOM4Q9ULL8 1493 aa42.76■■■■■ 4.44
MADCAM1-208ENST00000621286 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
MADCAM1-208ENST00000621286 CC2D2AQ9P2K1 1620 aa42.08■■■■■ 4.33
MADCAM1-208ENST00000621286 CECR2Q9BXF3 1484 aa41.87■■■■■ 4.29
MADCAM1-208ENST00000621286 SMARCA4P51532 1647 aa41.26■■■■■ 4.2
MADCAM1-208ENST00000621286 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
MADCAM1-208ENST00000621286 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
MADCAM1-208ENST00000621286 NCAPD3P42695 1498 aa41.12■■■■■ 4.17
MADCAM1-208ENST00000621286 SMARCA2P51531 1590 aa41.07■■■■■ 4.16
MADCAM1-208ENST00000621286 MROH2BQ7Z745 1585 aa40.96■■■■■ 4.15
MADCAM1-208ENST00000621286 HMGXB3Q12766 1538 aa40.85■■■■■ 4.13
MADCAM1-208ENST00000621286 BAZ1BQ9UIG0 1483 aaKnown RBP40.82■■■■■ 4.12
MADCAM1-208ENST00000621286 PEG3Q9GZU2 1588 aa40.81■■■■■ 4.12
MADCAM1-208ENST00000621286 WIZO95785 1651 aa40.53■■■■■ 4.08
MADCAM1-208ENST00000621286 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
MADCAM1-208ENST00000621286 ERCC6Q03468 1493 aa40.22■■■■■ 4.03
MADCAM1-208ENST00000621286 NESP48681 1621 aa40.22■■■■■ 4.03
MADCAM1-208ENST00000621286 LAMC3Q9Y6N6 1575 aa40.07■■■■■ 4.01
MADCAM1-208ENST00000621286 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
MADCAM1-208ENST00000621286 CADPSQ9ULU8 1353 aa39.97■■■■□ 3.99
MADCAM1-208ENST00000621286 PDS5BQ9NTI5 1447 aa39.89■■■■□ 3.98
MADCAM1-208ENST00000621286 CUX2O14529 1486 aa39.75■■■■□ 3.95
MADCAM1-208ENST00000621286 KIF21AQ7Z4S6 1674 aa39.7■■■■□ 3.95
MADCAM1-208ENST00000621286 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
MADCAM1-208ENST00000621286 CFTRP13569 1480 aa39.63■■■■□ 3.94
MADCAM1-208ENST00000621286 THOC2Q8NI27 1593 aaKnown RBP39.56■■■■□ 3.92
MADCAM1-208ENST00000621286 SUPT5HO00267 1087 aaKnown RBP39.51■■■■□ 3.92
MADCAM1-208ENST00000621286 FANCD2Q9BXW9 1451 aa39.5■■■■□ 3.91
MADCAM1-208ENST00000621286 CEP164Q9UPV0 1460 aa39.47■■■■□ 3.91
MADCAM1-208ENST00000621286 MRC2Q9UBG0 1479 aa39.43■■■■□ 3.9
MADCAM1-208ENST00000621286 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
MADCAM1-208ENST00000621286 WDR62O43379 1518 aa39.24■■■■□ 3.87
MADCAM1-208ENST00000621286 URB2Q14146 1524 aaKnown RBP39.07■■■■□ 3.84
MADCAM1-208ENST00000621286 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
MADCAM1-208ENST00000621286 ABCC8Q09428 1581 aa38.86■■■■□ 3.81
MADCAM1-208ENST00000621286 TOPBP1Q92547 1522 aa38.83■■■■□ 3.81
MADCAM1-208ENST00000621286 DNMBPQ6XZF7 1577 aa38.74■■■■□ 3.79
MADCAM1-208ENST00000621286 IFT140Q96RY7 1462 aa38.65■■■■□ 3.78
MADCAM1-208ENST00000621286 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
MADCAM1-208ENST00000621286 POLA1P09884 1462 aaPredicted RBP38.47■■■■□ 3.75
MADCAM1-208ENST00000621286 CUX1P39880 1505 aa38.43■■■■□ 3.74
MADCAM1-208ENST00000621286 SOGA1O94964 1423 aa38.41■■■■□ 3.74
MADCAM1-208ENST00000621286 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
MADCAM1-208ENST00000621286 TARBP1Q13395 1621 aaKnown RBP38.36■■■■□ 3.73
MADCAM1-208ENST00000621286 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
MADCAM1-208ENST00000621286 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
MADCAM1-208ENST00000621286 EIF4G3O43432 1585 aaKnown RBP38.27■■■■□ 3.72
MADCAM1-208ENST00000621286 OSCARQ8IYS5 282 aa38.25■■■■□ 3.71
MADCAM1-208ENST00000621286 TDRD9Q8NDG6 1382 aaKnown RBP38.21■■■■□ 3.71
MADCAM1-208ENST00000621286 WRNQ14191 1432 aaPredicted RBP eCLIP38.19■■■■□ 3.7
MADCAM1-208ENST00000621286 TOP2BQ02880 1626 aa38.05■■■■□ 3.68
MADCAM1-208ENST00000621286 FBLN2P98095 1184 aa38.04■■■■□ 3.68
MADCAM1-208ENST00000621286 WDR97A6NE52 1622 aa38.03■■■■□ 3.68
MADCAM1-208ENST00000621286 SYNJ1O43426 1573 aa38.02■■■■□ 3.68
MADCAM1-208ENST00000621286 BIVM-ERCC5R4GMW8 1640 aa38.02■■■■□ 3.68
MADCAM1-208ENST00000621286 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
MADCAM1-208ENST00000621286 GRIN2BQ13224 1484 aa37.93■■■■□ 3.66
MADCAM1-208ENST00000621286 GAPVD1Q14C86 1478 aa37.91■■■■□ 3.66
MADCAM1-208ENST00000621286 SNAPC4Q5SXM2 1469 aa37.89■■■■□ 3.66
MADCAM1-208ENST00000621286 CHMP7Q8WUX9 453 aaPredicted RBP37.86■■■■□ 3.65
MADCAM1-208ENST00000621286 CHD1O14646 1710 aa37.85■■■■□ 3.65
MADCAM1-208ENST00000621286 MAGI1Q96QZ7 1491 aaPredicted RBP37.82■■■■□ 3.64
MADCAM1-208ENST00000621286 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
MADCAM1-208ENST00000621286 ABCA5Q8WWZ7 1642 aa37.77■■■■□ 3.64
MADCAM1-208ENST00000621286 SYNJ2O15056 1496 aa37.68■■■■□ 3.62
MADCAM1-208ENST00000621286 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
MADCAM1-208ENST00000621286 ERICH3Q5RHP9 1530 aa37.51■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3CA6NJZ7 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3BA6NNM3 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 RIMBP3Q9UFD9 1639 aa37.5■■■■□ 3.59
MADCAM1-208ENST00000621286 ARHGEF11O15085 1522 aa37.47■■■■□ 3.59
MADCAM1-208ENST00000621286 FHAD1B1AJZ9 1412 aa37.46■■■■□ 3.59
MADCAM1-208ENST00000621286 ADAMTS12P58397 1594 aa37.44■■■■□ 3.58
MADCAM1-208ENST00000621286 KIF27Q86VH2 1401 aa37.43■■■■□ 3.58
MADCAM1-208ENST00000621286 GRIN2AQ12879 1464 aa37.41■■■■□ 3.58
MADCAM1-208ENST00000621286 CLASP1Q7Z460 1538 aa37.39■■■■□ 3.58
MADCAM1-208ENST00000621286 CYB5RLQ6IPT4 315 aa37.32■■■■□ 3.56
MADCAM1-208ENST00000621286 IGF1RP08069 1367 aa37.29■■■■□ 3.56
MADCAM1-208ENST00000621286 NUP160Q12769 1436 aa37.21■■■■□ 3.55
MADCAM1-208ENST00000621286 CEP170Q5SW79 1584 aa37.2■■■■□ 3.55
MADCAM1-208ENST00000621286 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
MADCAM1-208ENST00000621286 CUL7Q14999 1698 aa37.13■■■■□ 3.53
MADCAM1-208ENST00000621286 CARMIL1Q5VZK9 1371 aa37.09■■■■□ 3.53
MADCAM1-208ENST00000621286 JPH4Q96JJ6 628 aa37.01■■■■□ 3.52
MADCAM1-208ENST00000621286 RUSC2Q8N2Y8 1516 aa37■■■■□ 3.51
MADCAM1-208ENST00000621286 SHROOM2Q13796 1616 aa36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms