RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 NISCHQ9Y2I1 1504 aa53.31■■■■■ 6.12
CBWD1-203ENST00000377400 CCDC180Q9P1Z9 1646 aa47.08■■■■■ 5.13
CBWD1-203ENST00000377400 ABCC9O60706 1549 aa45.67■■■■■ 4.9
CBWD1-203ENST00000377400 DCAF8L2P0C7V8 631 aa44.61■■■■■ 4.73
CBWD1-203ENST00000377400 ZCCHC6Q5VYS8 1495 aaKnown RBP44.52■■■■■ 4.72
CBWD1-203ENST00000377400 NACADO15069 1562 aa44.16■■■■■ 4.66
CBWD1-203ENST00000377400 RB1CC1Q8TDY2 1594 aa44.11■■■■■ 4.65
CBWD1-203ENST00000377400 DCAF1Q9Y4B6 1507 aa44.06■■■■■ 4.64
CBWD1-203ENST00000377400 MYO15BQ96JP2 1530 aa44■■■■■ 4.63
CBWD1-203ENST00000377400 SCRIBQ14160 1630 aa43.15■■■■■ 4.5
CBWD1-203ENST00000377400 UNC13AQ9UPW8 1703 aa43.05■■■■■ 4.48
CBWD1-203ENST00000377400 PABPN1Q86U42 306 aaKnown RBP eCLIP42.83■■■■■ 4.45
CBWD1-203ENST00000377400 SHROOM4Q9ULL8 1493 aa42.7■■■■■ 4.43
CBWD1-203ENST00000377400 BICRAQ9NZM4 1560 aa42.66■■■■■ 4.42
CBWD1-203ENST00000377400 EIF4G1Q04637 1599 aaKnown RBP41.56■■■■■ 4.24
CBWD1-203ENST00000377400 CECR2Q9BXF3 1484 aa41.5■■■■■ 4.23
CBWD1-203ENST00000377400 BAZ1AQ9NRL2 1556 aaPredicted RBP41.31■■■■■ 4.2
CBWD1-203ENST00000377400 DNAJC5BQ9UF47 199 aa41.3■■■■■ 4.2
CBWD1-203ENST00000377400 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.2
CBWD1-203ENST00000377400 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
CBWD1-203ENST00000377400 MROH2BQ7Z745 1585 aa41.12■■■■■ 4.17
CBWD1-203ENST00000377400 ATAD2BQ9ULI0 1458 aa40.87■■■■■ 4.13
CBWD1-203ENST00000377400 RSF1Q96T23 1441 aaPredicted RBP40.87■■■■■ 4.13
CBWD1-203ENST00000377400 SMARCA2P51531 1590 aa40.87■■■■■ 4.13
CBWD1-203ENST00000377400 PEG3Q9GZU2 1588 aa40.75■■■■■ 4.11
CBWD1-203ENST00000377400 WIZO95785 1651 aa40.73■■■■■ 4.11
CBWD1-203ENST00000377400 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
CBWD1-203ENST00000377400 BAZ1BQ9UIG0 1483 aaKnown RBP40.64■■■■■ 4.1
CBWD1-203ENST00000377400 HMGXB3Q12766 1538 aa40.58■■■■■ 4.09
CBWD1-203ENST00000377400 SUPT5HO00267 1087 aaKnown RBP40.51■■■■■ 4.08
CBWD1-203ENST00000377400 TOP2AP11388 1531 aaKnown RBP40.3■■■■■ 4.04
CBWD1-203ENST00000377400 CCDC88BA6NC98 1476 aa39.86■■■■□ 3.97
CBWD1-203ENST00000377400 NESP48681 1621 aa39.65■■■■□ 3.94
CBWD1-203ENST00000377400 CADPSQ9ULU8 1353 aa39.64■■■■□ 3.94
CBWD1-203ENST00000377400 LAMC3Q9Y6N6 1575 aa39.59■■■■□ 3.93
CBWD1-203ENST00000377400 CFTRP13569 1480 aa39.49■■■■□ 3.91
CBWD1-203ENST00000377400 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
CBWD1-203ENST00000377400 PDS5BQ9NTI5 1447 aa39.37■■■■□ 3.89
CBWD1-203ENST00000377400 FANCD2Q9BXW9 1451 aa39.21■■■■□ 3.87
CBWD1-203ENST00000377400 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
CBWD1-203ENST00000377400 KIF21AQ7Z4S6 1674 aa39.17■■■■□ 3.86
CBWD1-203ENST00000377400 CEP164Q9UPV0 1460 aa39.11■■■■□ 3.85
CBWD1-203ENST00000377400 MRC2Q9UBG0 1479 aa38.9■■■■□ 3.82
CBWD1-203ENST00000377400 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
CBWD1-203ENST00000377400 URB2Q14146 1524 aaKnown RBP38.74■■■■□ 3.79
CBWD1-203ENST00000377400 WDR62O43379 1518 aa38.7■■■■□ 3.79
CBWD1-203ENST00000377400 ABCC8Q09428 1581 aa38.64■■■■□ 3.78
CBWD1-203ENST00000377400 DNMBPQ6XZF7 1577 aa38.62■■■■□ 3.77
CBWD1-203ENST00000377400 TOPBP1Q92547 1522 aa38.62■■■■□ 3.77
CBWD1-203ENST00000377400 CUX2O14529 1486 aa38.59■■■■□ 3.77
CBWD1-203ENST00000377400 WRNQ14191 1432 aaPredicted RBP eCLIP38.57■■■■□ 3.77
CBWD1-203ENST00000377400 CUX1P39880 1505 aa38.54■■■■□ 3.76
CBWD1-203ENST00000377400 SYNJ1O43426 1573 aa38.4■■■■□ 3.74
CBWD1-203ENST00000377400 TOP2BQ02880 1626 aa38.36■■■■□ 3.73
CBWD1-203ENST00000377400 FGD5Q6ZNL6 1462 aa38.35■■■■□ 3.73
CBWD1-203ENST00000377400 POLA1P09884 1462 aaPredicted RBP38.34■■■■□ 3.73
CBWD1-203ENST00000377400 BIVM-ERCC5R4GMW8 1640 aa38.32■■■■□ 3.72
CBWD1-203ENST00000377400 IFT140Q96RY7 1462 aa38.24■■■■□ 3.71
CBWD1-203ENST00000377400 SOGA1O94964 1423 aa38.23■■■■□ 3.71
CBWD1-203ENST00000377400 RAD54L2Q9Y4B4 1467 aa38.2■■■■□ 3.71
CBWD1-203ENST00000377400 TRIM41Q8WV44 630 aa38.19■■■■□ 3.7
CBWD1-203ENST00000377400 TARBP1Q13395 1621 aaKnown RBP38.1■■■■□ 3.69
CBWD1-203ENST00000377400 CHIC1Q5VXU3 224 aa38.03■■■■□ 3.68
CBWD1-203ENST00000377400 ZNF608Q9ULD9 1512 aaPredicted RBP38.02■■■■□ 3.68
CBWD1-203ENST00000377400 TDRD9Q8NDG6 1382 aaKnown RBP37.97■■■■□ 3.67
CBWD1-203ENST00000377400 ABCA10Q8WWZ4 1543 aa37.96■■■■□ 3.67
CBWD1-203ENST00000377400 AQRO60306 1485 aaKnown RBP eCLIP37.92■■■■□ 3.66
CBWD1-203ENST00000377400 WDR97A6NE52 1622 aa37.91■■■■□ 3.66
CBWD1-203ENST00000377400 EIF4G3O43432 1585 aaKnown RBP37.89■■■■□ 3.66
CBWD1-203ENST00000377400 GAPVD1Q14C86 1478 aa37.79■■■■□ 3.64
CBWD1-203ENST00000377400 ABCA5Q8WWZ7 1642 aa37.74■■■■□ 3.63
CBWD1-203ENST00000377400 KIF27Q86VH2 1401 aa37.73■■■■□ 3.63
CBWD1-203ENST00000377400 GRIN2BQ13224 1484 aa37.69■■■■□ 3.62
CBWD1-203ENST00000377400 PBRM1Q86U86 1689 aa37.63■■■■□ 3.62
CBWD1-203ENST00000377400 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
CBWD1-203ENST00000377400 RUSC2Q8N2Y8 1516 aa37.55■■■■□ 3.6
CBWD1-203ENST00000377400 ERICH3Q5RHP9 1530 aa37.52■■■■□ 3.6
CBWD1-203ENST00000377400 FBLN2P98095 1184 aa37.51■■■■□ 3.6
CBWD1-203ENST00000377400 MAGI1Q96QZ7 1491 aaPredicted RBP37.5■■■■□ 3.59
CBWD1-203ENST00000377400 FAM9AQ8IZU1 332 aaPredicted RBP37.46■■■■□ 3.59
CBWD1-203ENST00000377400 IGF1RP08069 1367 aa37.45■■■■□ 3.59
CBWD1-203ENST00000377400 CHMP7Q8WUX9 453 aaPredicted RBP37.43■■■■□ 3.58
CBWD1-203ENST00000377400 SYNJ2O15056 1496 aa37.37■■■■□ 3.57
CBWD1-203ENST00000377400 EEA1Q15075 1411 aa37.37■■■■□ 3.57
CBWD1-203ENST00000377400 ADAMTS12P58397 1594 aa37.36■■■■□ 3.57
CBWD1-203ENST00000377400 FHAD1B1AJZ9 1412 aa37.36■■■■□ 3.57
CBWD1-203ENST00000377400 CUL7Q14999 1698 aa37.32■■■■□ 3.56
CBWD1-203ENST00000377400 CSRNP3Q8WYN3 585 aa37.29■■■■□ 3.56
CBWD1-203ENST00000377400 CARMIL1Q5VZK9 1371 aa37.29■■■■□ 3.56
CBWD1-203ENST00000377400 CHD1O14646 1710 aa37.29■■■■□ 3.56
CBWD1-203ENST00000377400 OSCARQ8IYS5 282 aa37.21■■■■□ 3.55
CBWD1-203ENST00000377400 GRIN2AQ12879 1464 aa37.2■■■■□ 3.55
CBWD1-203ENST00000377400 RAPGEF2Q9Y4G8 1499 aa37.12■■■■□ 3.53
CBWD1-203ENST00000377400 PRXQ9BXM0 1461 aa37.07■■■■□ 3.53
CBWD1-203ENST00000377400 EHMT2Q96KQ7 1210 aa37.01■■■■□ 3.52
CBWD1-203ENST00000377400 CEP170Q5SW79 1584 aa36.97■■■■□ 3.51
CBWD1-203ENST00000377400 NUP160Q12769 1436 aa36.96■■■■□ 3.51
CBWD1-203ENST00000377400 KIF21BO75037 1637 aa36.9■■■■□ 3.5
CBWD1-203ENST00000377400 CLASP1Q7Z460 1538 aa36.84■■■■□ 3.49
CBWD1-203ENST00000377400 GOLGA3Q08378 1498 aa36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms