RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 NISCHQ9Y2I1 1504 aa53■■■■■ 6.08
RHBDL3-204ENST00000538145 CCDC180Q9P1Z9 1646 aa47.04■■■■■ 5.12
RHBDL3-204ENST00000538145 ABCC9O60706 1549 aa45.92■■■■■ 4.94
RHBDL3-204ENST00000538145 ZCCHC6Q5VYS8 1495 aaKnown RBP44.23■■■■■ 4.67
RHBDL3-204ENST00000538145 NACADO15069 1562 aa44.14■■■■■ 4.66
RHBDL3-204ENST00000538145 RB1CC1Q8TDY2 1594 aa44.09■■■■■ 4.65
RHBDL3-204ENST00000538145 MYO15BQ96JP2 1530 aa44.06■■■■■ 4.64
RHBDL3-204ENST00000538145 DCAF8L2P0C7V8 631 aa43.96■■■■■ 4.63
RHBDL3-204ENST00000538145 DCAF1Q9Y4B6 1507 aa43.95■■■■■ 4.63
RHBDL3-204ENST00000538145 UNC13AQ9UPW8 1703 aa43.14■■■■■ 4.5
RHBDL3-204ENST00000538145 SCRIBQ14160 1630 aa42.83■■■■■ 4.45
RHBDL3-204ENST00000538145 PABPN1Q86U42 306 aaKnown RBP eCLIP42.79■■■■■ 4.44
RHBDL3-204ENST00000538145 BICRAQ9NZM4 1560 aa42.79■■■■■ 4.44
RHBDL3-204ENST00000538145 DNAJC5BQ9UF47 199 aa42.56■■■■■ 4.4
RHBDL3-204ENST00000538145 SHROOM4Q9ULL8 1493 aa42.41■■■■■ 4.38
RHBDL3-204ENST00000538145 EIF4G1Q04637 1599 aaKnown RBP41.66■■■■■ 4.26
RHBDL3-204ENST00000538145 CC2D2AQ9P2K1 1620 aa41.58■■■■■ 4.25
RHBDL3-204ENST00000538145 CECR2Q9BXF3 1484 aa41.33■■■■■ 4.21
RHBDL3-204ENST00000538145 BAZ1AQ9NRL2 1556 aaPredicted RBP41.07■■■■■ 4.16
RHBDL3-204ENST00000538145 SMARCA4P51532 1647 aa41.06■■■■■ 4.16
RHBDL3-204ENST00000538145 MROH2BQ7Z745 1585 aa40.83■■■■■ 4.13
RHBDL3-204ENST00000538145 ATAD2BQ9ULI0 1458 aa40.77■■■■■ 4.12
RHBDL3-204ENST00000538145 SMARCA2P51531 1590 aa40.74■■■■■ 4.11
RHBDL3-204ENST00000538145 NCAPD3P42695 1498 aa40.73■■■■■ 4.11
RHBDL3-204ENST00000538145 PEG3Q9GZU2 1588 aa40.73■■■■■ 4.11
RHBDL3-204ENST00000538145 HMGXB3Q12766 1538 aa40.56■■■■■ 4.08
RHBDL3-204ENST00000538145 RSF1Q96T23 1441 aaPredicted RBP40.47■■■■■ 4.07
RHBDL3-204ENST00000538145 BAZ1BQ9UIG0 1483 aaKnown RBP40.41■■■■■ 4.06
RHBDL3-204ENST00000538145 WIZO95785 1651 aa40.4■■■■■ 4.06
RHBDL3-204ENST00000538145 TOP2AP11388 1531 aaKnown RBP40.01■■■■■ 4
RHBDL3-204ENST00000538145 NESP48681 1621 aa39.65■■■■□ 3.94
RHBDL3-204ENST00000538145 LAMC3Q9Y6N6 1575 aa39.6■■■■□ 3.93
RHBDL3-204ENST00000538145 ERCC6Q03468 1493 aa39.59■■■■□ 3.93
RHBDL3-204ENST00000538145 CADPSQ9ULU8 1353 aa39.52■■■■□ 3.92
RHBDL3-204ENST00000538145 CCDC88BA6NC98 1476 aa39.52■■■■□ 3.92
RHBDL3-204ENST00000538145 SUPT5HO00267 1087 aaKnown RBP39.5■■■■□ 3.91
RHBDL3-204ENST00000538145 CUX2O14529 1486 aa39.43■■■■□ 3.9
RHBDL3-204ENST00000538145 CFTRP13569 1480 aa39.37■■■■□ 3.89
RHBDL3-204ENST00000538145 PDS5BQ9NTI5 1447 aa39.29■■■■□ 3.88
RHBDL3-204ENST00000538145 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
RHBDL3-204ENST00000538145 KIF21AQ7Z4S6 1674 aa39.2■■■■□ 3.87
RHBDL3-204ENST00000538145 PRDM2Q13029 1718 aa39.14■■■■□ 3.86
RHBDL3-204ENST00000538145 FANCD2Q9BXW9 1451 aa39.04■■■■□ 3.84
RHBDL3-204ENST00000538145 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
RHBDL3-204ENST00000538145 MRC2Q9UBG0 1479 aa38.88■■■■□ 3.81
RHBDL3-204ENST00000538145 WDR62O43379 1518 aa38.81■■■■□ 3.8
RHBDL3-204ENST00000538145 DNAJC5Q9H3Z4 198 aa38.66■■■■□ 3.78
RHBDL3-204ENST00000538145 URB2Q14146 1524 aaKnown RBP38.65■■■■□ 3.78
RHBDL3-204ENST00000538145 ABCC8Q09428 1581 aa38.52■■■■□ 3.76
RHBDL3-204ENST00000538145 TOPBP1Q92547 1522 aa38.47■■■■□ 3.75
RHBDL3-204ENST00000538145 DNMBPQ6XZF7 1577 aa38.47■■■■□ 3.75
RHBDL3-204ENST00000538145 CUX1P39880 1505 aa38.28■■■■□ 3.72
RHBDL3-204ENST00000538145 IFT140Q96RY7 1462 aa38.17■■■■□ 3.7
RHBDL3-204ENST00000538145 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
RHBDL3-204ENST00000538145 WRNQ14191 1432 aaPredicted RBP eCLIP38.13■■■■□ 3.69
RHBDL3-204ENST00000538145 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
RHBDL3-204ENST00000538145 BIVM-ERCC5R4GMW8 1640 aa38.08■■■■□ 3.69
RHBDL3-204ENST00000538145 TARBP1Q13395 1621 aaKnown RBP38.07■■■■□ 3.68
RHBDL3-204ENST00000538145 TOP2BQ02880 1626 aa38.06■■■■□ 3.68
RHBDL3-204ENST00000538145 SYNJ1O43426 1573 aa38.03■■■■□ 3.68
RHBDL3-204ENST00000538145 SOGA1O94964 1423 aa37.99■■■■□ 3.67
RHBDL3-204ENST00000538145 RAD54L2Q9Y4B4 1467 aa37.95■■■■□ 3.67
RHBDL3-204ENST00000538145 ZNF608Q9ULD9 1512 aaPredicted RBP37.93■■■■□ 3.66
RHBDL3-204ENST00000538145 WDR97A6NE52 1622 aa37.83■■■■□ 3.65
RHBDL3-204ENST00000538145 EIF4G3O43432 1585 aaKnown RBP37.82■■■■□ 3.64
RHBDL3-204ENST00000538145 ABCA10Q8WWZ4 1543 aa37.79■■■■□ 3.64
RHBDL3-204ENST00000538145 AQRO60306 1485 aaKnown RBP eCLIP37.74■■■■□ 3.63
RHBDL3-204ENST00000538145 TDRD9Q8NDG6 1382 aaKnown RBP37.7■■■■□ 3.63
RHBDL3-204ENST00000538145 OSCARQ8IYS5 282 aa37.64■■■■□ 3.62
RHBDL3-204ENST00000538145 ABCA5Q8WWZ7 1642 aa37.62■■■■□ 3.61
RHBDL3-204ENST00000538145 GAPVD1Q14C86 1478 aa37.56■■■■□ 3.6
RHBDL3-204ENST00000538145 GRIN2BQ13224 1484 aa37.53■■■■□ 3.6
RHBDL3-204ENST00000538145 PBRM1Q86U86 1689 aa37.5■■■■□ 3.59
RHBDL3-204ENST00000538145 MAGI1Q96QZ7 1491 aaPredicted RBP37.42■■■■□ 3.58
RHBDL3-204ENST00000538145 SNAPC4Q5SXM2 1469 aa37.41■■■■□ 3.58
RHBDL3-204ENST00000538145 CHD1O14646 1710 aa37.36■■■■□ 3.57
RHBDL3-204ENST00000538145 TRIM41Q8WV44 630 aa37.36■■■■□ 3.57
RHBDL3-204ENST00000538145 ERICH3Q5RHP9 1530 aa37.35■■■■□ 3.57
RHBDL3-204ENST00000538145 KIF27Q86VH2 1401 aa37.31■■■■□ 3.56
RHBDL3-204ENST00000538145 SYNJ2O15056 1496 aa37.26■■■■□ 3.56
RHBDL3-204ENST00000538145 ADAMTS12P58397 1594 aa37.22■■■■□ 3.55
RHBDL3-204ENST00000538145 FHAD1B1AJZ9 1412 aa37.16■■■■□ 3.54
RHBDL3-204ENST00000538145 CHMP7Q8WUX9 453 aaPredicted RBP37.14■■■■□ 3.54
RHBDL3-204ENST00000538145 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
RHBDL3-204ENST00000538145 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
RHBDL3-204ENST00000538145 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
RHBDL3-204ENST00000538145 IGF1RP08069 1367 aa37.14■■■■□ 3.54
RHBDL3-204ENST00000538145 FBLN2P98095 1184 aa37.13■■■■□ 3.54
RHBDL3-204ENST00000538145 CHIC1Q5VXU3 224 aa37.12■■■■□ 3.53
RHBDL3-204ENST00000538145 ARHGEF11O15085 1522 aa37.08■■■■□ 3.53
RHBDL3-204ENST00000538145 CUL7Q14999 1698 aa37.06■■■■□ 3.52
RHBDL3-204ENST00000538145 GRIN2AQ12879 1464 aa37.05■■■■□ 3.52
RHBDL3-204ENST00000538145 RUSC2Q8N2Y8 1516 aa37.04■■■■□ 3.52
RHBDL3-204ENST00000538145 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
RHBDL3-204ENST00000538145 NUP160Q12769 1436 aa36.91■■■■□ 3.5
RHBDL3-204ENST00000538145 CARMIL1Q5VZK9 1371 aa36.9■■■■□ 3.5
RHBDL3-204ENST00000538145 CEP170Q5SW79 1584 aa36.86■■■■□ 3.49
RHBDL3-204ENST00000538145 EEA1Q15075 1411 aa36.82■■■■□ 3.49
RHBDL3-204ENST00000538145 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
RHBDL3-204ENST00000538145 RAPGEF2Q9Y4G8 1499 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms