Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 KRT18P10-201ENST00000388836 1287 ntBASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 AC233723.2-201ENST00000623798 2106 ntBASIC20.95■□□□□ 0.94
PTCHD4Q6ZW05 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTCHD4Q6ZW05 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTCHD4Q6ZW05 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTCHD4Q6ZW05 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTCHD4Q6ZW05 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 AL592293.1-201ENST00000502889 1188 ntBASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.9■□□□□ 0.94
PTCHD4Q6ZW05 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTCHD4Q6ZW05 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTCHD4Q6ZW05 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
PTCHD4Q6ZW05 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 SPCS2P3-201ENST00000500401 656 ntBASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTCHD4Q6ZW05 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 ANOS2P-203ENST00000472227 1816 ntBASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTCHD4Q6ZW05 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 EP400NL-214ENST00000641289 2402 ntBASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTCHD4Q6ZW05 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms