RNA–Protein interactions for RNA: ENST00000375310.5

CDC16-206, Transcript of cell division cycle 16, humanhuman

TSL 1 (best) BASIC

Gene CDC16, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-206ENST00000375310 NISCHQ9Y2I1 1504 aa49.71■■■■■ 5.55
CDC16-206ENST00000375310 CCDC180Q9P1Z9 1646 aa42.98■■■■■ 4.47
CDC16-206ENST00000375310 ZCCHC6Q5VYS8 1495 aaKnown RBP41.87■■■■■ 4.29
CDC16-206ENST00000375310 SHROOM4Q9ULL8 1493 aa41.27■■■■■ 4.2
CDC16-206ENST00000375310 DCAF8L2P0C7V8 631 aa41.16■■■■■ 4.18
CDC16-206ENST00000375310 DCAF1Q9Y4B6 1507 aa40.92■■■■■ 4.14
CDC16-206ENST00000375310 ABCC9O60706 1549 aa40.46■■■■■ 4.07
CDC16-206ENST00000375310 MYO15BQ96JP2 1530 aa40.18■■■■■ 4.02
CDC16-206ENST00000375310 SUPT5HO00267 1087 aaKnown RBP39.91■■■■□ 3.98
CDC16-206ENST00000375310 NACADO15069 1562 aa39.9■■■■□ 3.98
CDC16-206ENST00000375310 SCRIBQ14160 1630 aa39.88■■■■□ 3.97
CDC16-206ENST00000375310 RB1CC1Q8TDY2 1594 aa39.48■■■■□ 3.91
CDC16-206ENST00000375310 UNC13AQ9UPW8 1703 aa38.93■■■■□ 3.82
CDC16-206ENST00000375310 RSF1Q96T23 1441 aaPredicted RBP38.83■■■■□ 3.81
CDC16-206ENST00000375310 CECR2Q9BXF3 1484 aa38.75■■■■□ 3.79
CDC16-206ENST00000375310 MROH2BQ7Z745 1585 aa38.54■■■■□ 3.76
CDC16-206ENST00000375310 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
CDC16-206ENST00000375310 CHIC1Q5VXU3 224 aa38.37■■■■□ 3.73
CDC16-206ENST00000375310 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
CDC16-206ENST00000375310 WIZO95785 1651 aa38.3■■■■□ 3.72
CDC16-206ENST00000375310 BAZ1AQ9NRL2 1556 aaPredicted RBP38.3■■■■□ 3.72
CDC16-206ENST00000375310 SMARCA4P51532 1647 aa38.13■■■■□ 3.7
CDC16-206ENST00000375310 TOP2AP11388 1531 aaKnown RBP37.75■■■■□ 3.63
CDC16-206ENST00000375310 PEG3Q9GZU2 1588 aa37.52■■■■□ 3.6
CDC16-206ENST00000375310 SMARCA2P51531 1590 aa37.49■■■■□ 3.59
CDC16-206ENST00000375310 CCDC88BA6NC98 1476 aa37.46■■■■□ 3.59
CDC16-206ENST00000375310 EIF4G1Q04637 1599 aaKnown RBP37.4■■■■□ 3.58
CDC16-206ENST00000375310 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
CDC16-206ENST00000375310 TRIM41Q8WV44 630 aa37.34■■■■□ 3.57
CDC16-206ENST00000375310 BAZ1BQ9UIG0 1483 aaKnown RBP37.19■■■■□ 3.54
CDC16-206ENST00000375310 LOC105371045A0A1W2PR82 267 aa37.08■■■■□ 3.53
CDC16-206ENST00000375310 ABCC8Q09428 1581 aa36.98■■■■□ 3.51
CDC16-206ENST00000375310 FAM9AQ8IZU1 332 aaPredicted RBP36.88■■■■□ 3.49
CDC16-206ENST00000375310 NCAPD3P42695 1498 aa36.86■■■■□ 3.49
CDC16-206ENST00000375310 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
CDC16-206ENST00000375310 CC2D2AQ9P2K1 1620 aa36.55■■■■□ 3.44
CDC16-206ENST00000375310 WRNQ14191 1432 aaPredicted RBP eCLIP36.51■■■■□ 3.44
CDC16-206ENST00000375310 EHMT2Q96KQ7 1210 aa36.51■■■■□ 3.44
CDC16-206ENST00000375310 SYNJ1O43426 1573 aa36.43■■■■□ 3.42
CDC16-206ENST00000375310 SOGA1O94964 1423 aa36.36■■■■□ 3.41
CDC16-206ENST00000375310 RUSC2Q8N2Y8 1516 aa36.25■■■■□ 3.39
CDC16-206ENST00000375310 CFTRP13569 1480 aa36.24■■■■□ 3.39
CDC16-206ENST00000375310 TOP2BQ02880 1626 aa36.12■■■■□ 3.37
CDC16-206ENST00000375310 EEA1Q15075 1411 aa36.1■■■■□ 3.37
CDC16-206ENST00000375310 PRDM2Q13029 1718 aa36.09■■■■□ 3.37
CDC16-206ENST00000375310 BIVM-ERCC5R4GMW8 1640 aa36.07■■■■□ 3.36
CDC16-206ENST00000375310 CSRNP3Q8WYN3 585 aa36.02■■■■□ 3.36
CDC16-206ENST00000375310 CADPSQ9ULU8 1353 aa36.01■■■■□ 3.35
CDC16-206ENST00000375310 CUX1P39880 1505 aa35.98■■■■□ 3.35
CDC16-206ENST00000375310 PCGF6Q9BYE7 350 aa35.91■■■■□ 3.34
CDC16-206ENST00000375310 GOLGA3Q08378 1498 aa35.76■■■■□ 3.32
CDC16-206ENST00000375310 TNIKQ9UKE5 1360 aa35.73■■■■□ 3.31
CDC16-206ENST00000375310 NESP48681 1621 aa35.73■■■■□ 3.31
CDC16-206ENST00000375310 DNAJC5BQ9UF47 199 aa35.72■■■■□ 3.31
CDC16-206ENST00000375310 KIF21BO75037 1637 aa35.72■■■■□ 3.31
CDC16-206ENST00000375310 UBTFP17480 764 aaKnown RBP35.7■■■■□ 3.31
CDC16-206ENST00000375310 CEP164Q9UPV0 1460 aa35.69■■■■□ 3.3
CDC16-206ENST00000375310 CEP162Q5TB80 1403 aa35.69■■■■□ 3.3
CDC16-206ENST00000375310 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
CDC16-206ENST00000375310 TRIM26Q12899 539 aaPredicted RBP35.59■■■■□ 3.29
CDC16-206ENST00000375310 RAPGEF2Q9Y4G8 1499 aa35.57■■■■□ 3.28
CDC16-206ENST00000375310 LAMC3Q9Y6N6 1575 aa35.52■■■■□ 3.28
CDC16-206ENST00000375310 FGD5Q6ZNL6 1462 aa35.5■■■■□ 3.27
CDC16-206ENST00000375310 KIF27Q86VH2 1401 aa35.49■■■■□ 3.27
CDC16-206ENST00000375310 PPARGC1BQ86YN6 1023 aaKnown RBP35.42■■■■□ 3.26
CDC16-206ENST00000375310 PRXQ9BXM0 1461 aa35.4■■■■□ 3.26
CDC16-206ENST00000375310 DNMBPQ6XZF7 1577 aa35.4■■■■□ 3.26
CDC16-206ENST00000375310 CUX2O14529 1486 aa35.37■■■■□ 3.25
CDC16-206ENST00000375310 TOPBP1Q92547 1522 aa35.35■■■■□ 3.25
CDC16-206ENST00000375310 ERICH3Q5RHP9 1530 aa35.34■■■■□ 3.25
CDC16-206ENST00000375310 CLIP1P30622 1438 aa35.26■■■■□ 3.24
CDC16-206ENST00000375310 KIF21AQ7Z4S6 1674 aa35.26■■■■□ 3.23
CDC16-206ENST00000375310 URB2Q14146 1524 aaKnown RBP35.24■■■■□ 3.23
CDC16-206ENST00000375310 POLA1P09884 1462 aaPredicted RBP35.24■■■■□ 3.23
CDC16-206ENST00000375310 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
CDC16-206ENST00000375310 RAD54L2Q9Y4B4 1467 aa35.22■■■■□ 3.23
CDC16-206ENST00000375310 HRCP23327 699 aa35.2■■■■□ 3.22
CDC16-206ENST00000375310 RANGAP1P46060 587 aaPredicted RBP35.18■■■■□ 3.22
CDC16-206ENST00000375310 IGF1RP08069 1367 aa35.17■■■■□ 3.22
CDC16-206ENST00000375310 ABCA10Q8WWZ4 1543 aa35.1■■■■□ 3.21
CDC16-206ENST00000375310 TTBK1Q5TCY1 1321 aaPredicted RBP35.06■■■■□ 3.2
CDC16-206ENST00000375310 CARMIL1Q5VZK9 1371 aa35■■■■□ 3.19
CDC16-206ENST00000375310 VPS8Q8N3P4 1428 aa34.99■■■■□ 3.19
CDC16-206ENST00000375310 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
CDC16-206ENST00000375310 ARAP1Q96P48 1450 aa34.89■■■■□ 3.18
CDC16-206ENST00000375310 ABCA5Q8WWZ7 1642 aa34.82■■■■□ 3.16
CDC16-206ENST00000375310 TDRD9Q8NDG6 1382 aaKnown RBP34.82■■■■□ 3.16
CDC16-206ENST00000375310 MRC2Q9UBG0 1479 aa34.8■■■■□ 3.16
CDC16-206ENST00000375310 CUL7Q14999 1698 aa34.77■■■■□ 3.16
CDC16-206ENST00000375310 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
CDC16-206ENST00000375310 ARHGAP35Q9NRY4 1499 aa34.77■■■■□ 3.16
CDC16-206ENST00000375310 GAPVD1Q14C86 1478 aa34.72■■■■□ 3.15
CDC16-206ENST00000375310 APLP2Q06481 763 aa34.64■■■■□ 3.14
CDC16-206ENST00000375310 WDR62O43379 1518 aa34.59■■■■□ 3.13
CDC16-206ENST00000375310 CTTNBP2Q8WZ74 1663 aa34.56■■■■□ 3.12
CDC16-206ENST00000375310 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
CDC16-206ENST00000375310 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
CDC16-206ENST00000375310 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.112e-7■■■■■ 38.5
CDC16-206ENST00000375310 THOC2Q8NI27 1593 aaKnown RBP34.43■■■■□ 3.1
CDC16-206ENST00000375310 ZNF608Q9ULD9 1512 aaPredicted RBP34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms