RNA–Protein interactions for RNA: ENST00000562901.5

HACD3-205, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-205ENST00000562901 NISCHQ9Y2I1 1504 aa51.15■■■■■ 5.78
HACD3-205ENST00000562901 CCDC180Q9P1Z9 1646 aa44.46■■■■■ 4.71
HACD3-205ENST00000562901 ZCCHC6Q5VYS8 1495 aaKnown RBP42.96■■■■■ 4.47
HACD3-205ENST00000562901 DCAF8L2P0C7V8 631 aa42.45■■■■■ 4.39
HACD3-205ENST00000562901 DCAF1Q9Y4B6 1507 aa42.19■■■■■ 4.35
HACD3-205ENST00000562901 ABCC9O60706 1549 aa42.14■■■■■ 4.34
HACD3-205ENST00000562901 SHROOM4Q9ULL8 1493 aa42■■■■■ 4.31
HACD3-205ENST00000562901 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
HACD3-205ENST00000562901 NACADO15069 1562 aa41.43■■■■■ 4.22
HACD3-205ENST00000562901 RB1CC1Q8TDY2 1594 aa41.07■■■■■ 4.17
HACD3-205ENST00000562901 SCRIBQ14160 1630 aa41.05■■■■■ 4.16
HACD3-205ENST00000562901 SUPT5HO00267 1087 aaKnown RBP40.48■■■■■ 4.07
HACD3-205ENST00000562901 UNC13AQ9UPW8 1703 aa40.26■■■■■ 4.04
HACD3-205ENST00000562901 BICRAQ9NZM4 1560 aa39.84■■■■□ 3.97
HACD3-205ENST00000562901 PABPN1Q86U42 306 aaKnown RBP eCLIP39.84■■■■□ 3.97
HACD3-205ENST00000562901 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
HACD3-205ENST00000562901 RSF1Q96T23 1441 aaPredicted RBP39.75■■■■□ 3.95
HACD3-205ENST00000562901 MROH2BQ7Z745 1585 aa39.56■■■■□ 3.92
HACD3-205ENST00000562901 BAZ1AQ9NRL2 1556 aaPredicted RBP39.47■■■■□ 3.91
HACD3-205ENST00000562901 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
HACD3-205ENST00000562901 WIZO95785 1651 aa39.26■■■■□ 3.88
HACD3-205ENST00000562901 TOP2AP11388 1531 aaKnown RBP38.79■■■■□ 3.8
HACD3-205ENST00000562901 PEG3Q9GZU2 1588 aa38.74■■■■□ 3.79
HACD3-205ENST00000562901 CHIC1Q5VXU3 224 aa38.72■■■■□ 3.79
HACD3-205ENST00000562901 EIF4G1Q04637 1599 aaKnown RBP38.65■■■■□ 3.78
HACD3-205ENST00000562901 ATAD2BQ9ULI0 1458 aa38.64■■■■□ 3.78
HACD3-205ENST00000562901 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
HACD3-205ENST00000562901 CCDC88BA6NC98 1476 aa38.46■■■■□ 3.75
HACD3-205ENST00000562901 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
HACD3-205ENST00000562901 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
HACD3-205ENST00000562901 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
HACD3-205ENST00000562901 CC2D2AQ9P2K1 1620 aa38.08■■■■□ 3.69
HACD3-205ENST00000562901 TRIM41Q8WV44 630 aa38■■■■□ 3.67
HACD3-205ENST00000562901 ABCC8Q09428 1581 aa37.71■■■■□ 3.63
HACD3-205ENST00000562901 CFTRP13569 1480 aa37.45■■■■□ 3.59
HACD3-205ENST00000562901 WRNQ14191 1432 aaPredicted RBP eCLIP37.42■■■■□ 3.58
HACD3-205ENST00000562901 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
HACD3-205ENST00000562901 CADPSQ9ULU8 1353 aa37.33■■■■□ 3.57
HACD3-205ENST00000562901 LOC105371045A0A1W2PR82 267 aa37.33■■■■□ 3.57
HACD3-205ENST00000562901 SYNJ1O43426 1573 aa37.26■■■■□ 3.55
HACD3-205ENST00000562901 PRDM2Q13029 1718 aa37.21■■■■□ 3.55
HACD3-205ENST00000562901 DNAJC5BQ9UF47 199 aa37.2■■■■□ 3.55
HACD3-205ENST00000562901 TOP2BQ02880 1626 aa37.06■■■■□ 3.52
HACD3-205ENST00000562901 SOGA1O94964 1423 aa37.04■■■■□ 3.52
HACD3-205ENST00000562901 NESP48681 1621 aa37.02■■■■□ 3.52
HACD3-205ENST00000562901 BIVM-ERCC5R4GMW8 1640 aa37■■■■□ 3.51
HACD3-205ENST00000562901 CUX1P39880 1505 aa36.98■■■■□ 3.51
HACD3-205ENST00000562901 EHMT2Q96KQ7 1210 aa36.94■■■■□ 3.5
HACD3-205ENST00000562901 FANCD2Q9BXW9 1451 aa36.93■■■■□ 3.5
HACD3-205ENST00000562901 LAMC3Q9Y6N6 1575 aa36.92■■■■□ 3.5
HACD3-205ENST00000562901 RUSC2Q8N2Y8 1516 aa36.91■■■■□ 3.5
HACD3-205ENST00000562901 EEA1Q15075 1411 aa36.88■■■■□ 3.5
HACD3-205ENST00000562901 CSRNP3Q8WYN3 585 aa36.78■■■■□ 3.48
HACD3-205ENST00000562901 PDS5BQ9NTI5 1447 aa36.69■■■■□ 3.46
HACD3-205ENST00000562901 CEP164Q9UPV0 1460 aa36.67■■■■□ 3.46
HACD3-205ENST00000562901 DNMBPQ6XZF7 1577 aa36.58■■■■□ 3.45
HACD3-205ENST00000562901 FGD5Q6ZNL6 1462 aa36.57■■■■□ 3.44
HACD3-205ENST00000562901 TOPBP1Q92547 1522 aa36.53■■■■□ 3.44
HACD3-205ENST00000562901 KIF21AQ7Z4S6 1674 aa36.52■■■■□ 3.44
HACD3-205ENST00000562901 KIF27Q86VH2 1401 aa36.46■■■■□ 3.43
HACD3-205ENST00000562901 URB2Q14146 1524 aaKnown RBP36.46■■■■□ 3.43
HACD3-205ENST00000562901 GOLGA3Q08378 1498 aa36.43■■■■□ 3.42
HACD3-205ENST00000562901 KIF21BO75037 1637 aa36.4■■■■□ 3.42
HACD3-205ENST00000562901 UBTFP17480 764 aaKnown RBP36.39■■■■□ 3.42
HACD3-205ENST00000562901 CUX2O14529 1486 aa36.38■■■■□ 3.41
HACD3-205ENST00000562901 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
HACD3-205ENST00000562901 TNIKQ9UKE5 1360 aa36.34■■■■□ 3.41
HACD3-205ENST00000562901 RAD54L2Q9Y4B4 1467 aa36.3■■■■□ 3.4
HACD3-205ENST00000562901 RAPGEF2Q9Y4G8 1499 aa36.26■■■■□ 3.39
HACD3-205ENST00000562901 PRXQ9BXM0 1461 aa36.21■■■■□ 3.39
HACD3-205ENST00000562901 MRC2Q9UBG0 1479 aa36.21■■■■□ 3.39
HACD3-205ENST00000562901 ABCA10Q8WWZ4 1543 aa36.2■■■■□ 3.39
HACD3-205ENST00000562901 CEP162Q5TB80 1403 aa36.18■■■■□ 3.38
HACD3-205ENST00000562901 IGF1RP08069 1367 aa36.15■■■■□ 3.38
HACD3-205ENST00000562901 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
HACD3-205ENST00000562901 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
HACD3-205ENST00000562901 WDR97A6NE52 1622 aa36.04■■■■□ 3.36
HACD3-205ENST00000562901 CARMIL1Q5VZK9 1371 aa35.99■■■■□ 3.35
HACD3-205ENST00000562901 WDR62O43379 1518 aa35.97■■■■□ 3.35
HACD3-205ENST00000562901 TDRD9Q8NDG6 1382 aaKnown RBP35.96■■■■□ 3.35
HACD3-205ENST00000562901 TARBP1Q13395 1621 aaKnown RBP35.94■■■■□ 3.34
HACD3-205ENST00000562901 ABCA5Q8WWZ7 1642 aa35.88■■■■□ 3.34
HACD3-205ENST00000562901 CLIP1P30622 1438 aa35.88■■■■□ 3.33
HACD3-205ENST00000562901 RANGAP1P46060 587 aaPredicted RBP35.87■■■■□ 3.33
HACD3-205ENST00000562901 GAPVD1Q14C86 1478 aa35.86■■■■□ 3.33
HACD3-205ENST00000562901 THOC2Q8NI27 1593 aaKnown RBP35.85■■■■□ 3.33
HACD3-205ENST00000562901 CUL7Q14999 1698 aa35.79■■■■□ 3.32
HACD3-205ENST00000562901 IFT140Q96RY7 1462 aa35.77■■■■□ 3.32
HACD3-205ENST00000562901 PCGF6Q9BYE7 350 aa35.72■■■■□ 3.31
HACD3-205ENST00000562901 AQRO60306 1485 aaKnown RBP eCLIP35.7■■■■□ 3.311e-6■■■■□ 23.2
HACD3-205ENST00000562901 PPARGC1BQ86YN6 1023 aaKnown RBP35.64■■■■□ 3.3
HACD3-205ENST00000562901 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
HACD3-205ENST00000562901 TRIM26Q12899 539 aaPredicted RBP35.63■■■■□ 3.29
HACD3-205ENST00000562901 PBRM1Q86U86 1689 aa35.62■■■■□ 3.29
HACD3-205ENST00000562901 VPS8Q8N3P4 1428 aa35.55■■■■□ 3.28
HACD3-205ENST00000562901 GRIN2BQ13224 1484 aa35.55■■■■□ 3.28
HACD3-205ENST00000562901 ARAP1Q96P48 1450 aa35.5■■■■□ 3.27
HACD3-205ENST00000562901 ARHGAP35Q9NRY4 1499 aa35.47■■■■□ 3.27
HACD3-205ENST00000562901 EIF4G3O43432 1585 aaKnown RBP35.46■■■■□ 3.27
HACD3-205ENST00000562901 FHAD1B1AJZ9 1412 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms