RNA–Protein interactions for RNA: ENST00000354900.7

LSR-202, Transcript of lipolysis stimulated lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LSR, Length 2,105 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSR-202ENST00000354900 NISCHQ9Y2I1 1504 aa44.58■■■■■ 4.73
LSR-202ENST00000354900 CCDC180Q9P1Z9 1646 aa38.91■■■■□ 3.82
LSR-202ENST00000354900 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
LSR-202ENST00000354900 ZCCHC6Q5VYS8 1495 aaKnown RBP37.57■■■■□ 3.6
LSR-202ENST00000354900 ABCC9O60706 1549 aa37.39■■■■□ 3.58
LSR-202ENST00000354900 SUPT5HO00267 1087 aaKnown RBP37.24■■■■□ 3.55
LSR-202ENST00000354900 DCAF8L2P0C7V8 631 aa37.15■■■■□ 3.54
LSR-202ENST00000354900 DCAF1Q9Y4B6 1507 aa36.79■■■■□ 3.48
LSR-202ENST00000354900 CHIC1Q5VXU3 224 aa36.51■■■■□ 3.44
LSR-202ENST00000354900 MYO15BQ96JP2 1530 aa36.51■■■■□ 3.44
LSR-202ENST00000354900 NACADO15069 1562 aa36.43■■■■□ 3.42
LSR-202ENST00000354900 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
LSR-202ENST00000354900 HRCP23327 699 aa36.14■■■■□ 3.38
LSR-202ENST00000354900 SCRIBQ14160 1630 aa35.85■■■■□ 3.33
LSR-202ENST00000354900 PCGF6Q9BYE7 350 aa35.72■■■■□ 3.31
LSR-202ENST00000354900 UNC13AQ9UPW8 1703 aa35.4■■■■□ 3.26
LSR-202ENST00000354900 LOC105371045A0A1W2PR82 267 aa35.32■■■■□ 3.24
LSR-202ENST00000354900 PABPN1Q86U42 306 aaKnown RBP eCLIP35.28■■■■□ 3.24
LSR-202ENST00000354900 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
LSR-202ENST00000354900 RSF1Q96T23 1441 aaPredicted RBP35.13■■■■□ 3.21
LSR-202ENST00000354900 TRIM26Q12899 539 aaPredicted RBP35.11■■■■□ 3.21
LSR-202ENST00000354900 PPARGC1BQ86YN6 1023 aaKnown RBP35.1■■■■□ 3.21
LSR-202ENST00000354900 TRIM41Q8WV44 630 aa34.78■■■■□ 3.16
LSR-202ENST00000354900 CECR2Q9BXF3 1484 aa34.75■■■■□ 3.15
LSR-202ENST00000354900 ZEB1P37275 1124 aaPredicted RBP34.64■■■■□ 3.14
LSR-202ENST00000354900 MROH2BQ7Z745 1585 aa34.46■■■■□ 3.11
LSR-202ENST00000354900 BAZ1AQ9NRL2 1556 aaPredicted RBP34.41■■■■□ 3.1
LSR-202ENST00000354900 FAM9AQ8IZU1 332 aaPredicted RBP34.35■■■■□ 3.09
LSR-202ENST00000354900 SMARCA4P51532 1647 aa34.31■■■■□ 3.08
LSR-202ENST00000354900 WIZO95785 1651 aa34.24■■■■□ 3.07
LSR-202ENST00000354900 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
LSR-202ENST00000354900 EHMT2Q96KQ7 1210 aa33.94■■■■□ 3.02
LSR-202ENST00000354900 ATAD2BQ9ULI0 1458 aa33.93■■■■□ 3.02
LSR-202ENST00000354900 PEG3Q9GZU2 1588 aa33.89■■■■□ 3.02
LSR-202ENST00000354900 SMARCA2P51531 1590 aa33.82■■■■□ 3
LSR-202ENST00000354900 TOP2AP11388 1531 aaKnown RBP33.81■■■■□ 3
LSR-202ENST00000354900 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
LSR-202ENST00000354900 NCAPD3P42695 1498 aa33.7■■■□□ 2.99
LSR-202ENST00000354900 BAZ1BQ9UIG0 1483 aaKnown RBP33.68■■■□□ 2.98
LSR-202ENST00000354900 WRNQ14191 1432 aaPredicted RBP eCLIP33.6■■■□□ 2.97
LSR-202ENST00000354900 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.96
LSR-202ENST00000354900 ABCC8Q09428 1581 aa33.56■■■□□ 2.96
LSR-202ENST00000354900 PELP1Q8IZL8 1130 aaKnown RBP33.55■■■□□ 2.96
LSR-202ENST00000354900 HMGXB3Q12766 1538 aa33.53■■■□□ 2.96
LSR-202ENST00000354900 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
LSR-202ENST00000354900 CCER1Q8TC90 406 aaPredicted RBP33.5■■■□□ 2.95
LSR-202ENST00000354900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.46■■■□□ 2.95
LSR-202ENST00000354900 SCAF1Q9H7N4 1312 aaKnown RBP33.46■■■□□ 2.95
LSR-202ENST00000354900 EEA1Q15075 1411 aa33.43■■■□□ 2.94
LSR-202ENST00000354900 CEP162Q5TB80 1403 aa33.43■■■□□ 2.94
LSR-202ENST00000354900 TNIKQ9UKE5 1360 aa33.39■■■□□ 2.94
LSR-202ENST00000354900 SOGA1O94964 1423 aa33.3■■■□□ 2.92
LSR-202ENST00000354900 CSRNP3Q8WYN3 585 aa33.19■■■□□ 2.9
LSR-202ENST00000354900 GOLGA3Q08378 1498 aa33.15■■■□□ 2.9
LSR-202ENST00000354900 ACIN1Q9UKV3 1341 aaKnown RBP33.11■■■□□ 2.89
LSR-202ENST00000354900 RUSC2Q8N2Y8 1516 aa33.08■■■□□ 2.89
LSR-202ENST00000354900 DIEXFQ68CQ4 756 aaKnown RBP33.08■■■□□ 2.89
LSR-202ENST00000354900 UBTFP17480 764 aaKnown RBP33.04■■■□□ 2.88
LSR-202ENST00000354900 TTBK1Q5TCY1 1321 aaPredicted RBP33■■■□□ 2.87
LSR-202ENST00000354900 KIF21BO75037 1637 aa32.96■■■□□ 2.87
LSR-202ENST00000354900 CENPBP07199 599 aaPredicted RBP32.95■■■□□ 2.86
LSR-202ENST00000354900 CEP164Q9UPV0 1460 aa32.93■■■□□ 2.86
LSR-202ENST00000354900 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
LSR-202ENST00000354900 SYNJ1O43426 1573 aa32.85■■■□□ 2.85
LSR-202ENST00000354900 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
LSR-202ENST00000354900 CFTRP13569 1480 aa32.83■■■□□ 2.85
LSR-202ENST00000354900 ZNF316A6NFI3 1004 aaPredicted RBP32.77■■■□□ 2.84
LSR-202ENST00000354900 CLIP1P30622 1438 aa32.73■■■□□ 2.83
LSR-202ENST00000354900 NESP48681 1621 aa32.7■■■□□ 2.83
LSR-202ENST00000354900 VPS8Q8N3P4 1428 aa32.68■■■□□ 2.82
LSR-202ENST00000354900 GTF3C3Q9Y5Q9 886 aa32.66■■■□□ 2.82
LSR-202ENST00000354900 LAMC3Q9Y6N6 1575 aa32.54■■■□□ 2.8
LSR-202ENST00000354900 RAPGEF2Q9Y4G8 1499 aa32.51■■■□□ 2.8
LSR-202ENST00000354900 APLP2Q06481 763 aa32.5■■■□□ 2.79
LSR-202ENST00000354900 HNRNPUL2Q1KMD3 747 aaKnown RBP32.5■■■□□ 2.79
LSR-202ENST00000354900 TOP2BQ02880 1626 aa32.49■■■□□ 2.79
LSR-202ENST00000354900 FANCD2Q9BXW9 1451 aa32.44■■■□□ 2.78
LSR-202ENST00000354900 PRDM2Q13029 1718 aa32.41■■■□□ 2.78
LSR-202ENST00000354900 BIVM-ERCC5R4GMW8 1640 aa32.41■■■□□ 2.78
LSR-202ENST00000354900 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
LSR-202ENST00000354900 ERICH3Q5RHP9 1530 aa32.36■■■□□ 2.77
LSR-202ENST00000354900 CLSPNQ9HAW4 1339 aa32.25■■■□□ 2.75
LSR-202ENST00000354900 MIER1Q8N108 512 aa32.25■■■□□ 2.75
LSR-202ENST00000354900 PRXQ9BXM0 1461 aa32.23■■■□□ 2.75
LSR-202ENST00000354900 CUX1P39880 1505 aa32.22■■■□□ 2.75
LSR-202ENST00000354900 YTHDC1Q96MU7 727 aaKnown RBP32.2■■■□□ 2.74
LSR-202ENST00000354900 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
LSR-202ENST00000354900 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
LSR-202ENST00000354900 RANGAP1P46060 587 aaPredicted RBP32.11■■■□□ 2.73
LSR-202ENST00000354900 URB2Q14146 1524 aaKnown RBP32.06■■■□□ 2.72
LSR-202ENST00000354900 ERCC6Q03468 1493 aa32.06■■■□□ 2.72
LSR-202ENST00000354900 DHX57Q6P158 1386 aaKnown RBP32.06■■■□□ 2.72
LSR-202ENST00000354900 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
LSR-202ENST00000354900 MYT1Q01538 1121 aa32.02■■■□□ 2.72
LSR-202ENST00000354900 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
LSR-202ENST00000354900 RRBP1Q9P2E9 1410 aaKnown RBP32■■■□□ 2.71
LSR-202ENST00000354900 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
LSR-202ENST00000354900 MRC2Q9UBG0 1479 aa31.96■■■□□ 2.71
LSR-202ENST00000354900 FGD5Q6ZNL6 1462 aa31.94■■■□□ 2.7
LSR-202ENST00000354900 CUX2O14529 1486 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms