Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 LMF1-203ENST00000545827 2731 ntTSL 216.55■□□□□ 0.247e-7■■■■■ 39.9
DKC1O60832 DHRSX-207ENST00000478825 679 ntTSL 225.46■■□□□ 1.675e-10■■■■■ 39.8
DKC1O60832 DHRSX-203ENST00000430536 490 ntTSL 223.68■■□□□ 1.385e-10■■■■■ 39.8
DKC1O60832 DHRSX-202ENST00000412516 744 ntTSL 222.84■■□□□ 1.255e-10■■■■■ 39.8
DKC1O60832 DHRSX-205ENST00000444280 797 ntTSL 219.33■□□□□ 0.685e-10■■■■■ 39.8
DKC1O60832 DHRSX-204ENST00000441131 539 ntTSL 28.46□□□□□ -1.065e-10■■■■■ 39.8
DKC1O60832 ATP2B4-202ENST00000356729 613 ntTSL 510.41□□□□□ -0.742e-47■■■■■ 39.8
DKC1O60832 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.842e-47■■■■■ 39.8
DKC1O60832 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.83□□□□□ -12e-47■■■■■ 39.8
DKC1O60832 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.22□□□□□ -1.092e-47■■■■■ 39.8
DKC1O60832 ATP2B4-207ENST00000484746 4697 ntTSL 1 (best)6.31□□□□□ -1.42e-47■■■■■ 39.8
DKC1O60832 SNORA77-201ENST00000408716 125 ntBASIC5.62□□□□□ -1.512e-47■■■■■ 39.8
DKC1O60832 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.82■■□□□ 1.081e-7■■■■■ 39.7
DKC1O60832 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC11.96□□□□□ -0.51e-7■■■■■ 39.7
DKC1O60832 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC11.13□□□□□ -0.631e-7■■■■■ 39.7
DKC1O60832 ACSF2-218ENST00000510410 1745 ntTSL 227.09■■□□□ 1.936e-9■■■■■ 39.7
DKC1O60832 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.22■■□□□ 1.476e-9■■■■■ 39.7
DKC1O60832 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.83■■□□□ 1.416e-9■■■■■ 39.7
DKC1O60832 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.14■■□□□ 1.32e-6■■■■■ 39.7
DKC1O60832 PHGDH-210ENST00000641115 1638 ntBASIC22.16■■□□□ 1.141e-16■■■■■ 39.7
DKC1O60832 PDE9A-227ENST00000495521 1565 ntTSL 1 (best)21.08■□□□□ 0.972e-6■■■■■ 39.7
DKC1O60832 PDE9A-216ENST00000462571 1784 ntTSL 1 (best)20.82■□□□□ 0.922e-6■■■■■ 39.7
DKC1O60832 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.82■□□□□ 0.922e-6■■■■■ 39.7
DKC1O60832 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.922e-6■■■■■ 39.7
DKC1O60832 PDE9A-225ENST00000490803 1865 ntTSL 1 (best)20.75■□□□□ 0.912e-6■■■■■ 39.7
DKC1O60832 PDE9A-215ENST00000460989 1521 ntTSL 1 (best)20.57■□□□□ 0.882e-6■■■■■ 39.7
DKC1O60832 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.32■□□□□ 0.841e-16■■■■■ 39.7
DKC1O60832 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.26■□□□□ 0.832e-6■■■■■ 39.7
DKC1O60832 ACSF2-211ENST00000506582 594 ntTSL 520.18■□□□□ 0.826e-9■■■■■ 39.7
DKC1O60832 PHGDH-209ENST00000641074 1780 ntBASIC20.18■□□□□ 0.821e-16■■■■■ 39.7
DKC1O60832 PDE9A-221ENST00000470987 1954 ntTSL 1 (best)19.82■□□□□ 0.762e-6■■■■■ 39.7
DKC1O60832 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.741e-16■■■■■ 39.7
DKC1O60832 PHGDH-214ENST00000641314 1558 nt19.58■□□□□ 0.731e-16■■■■■ 39.7
DKC1O60832 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.57■□□□□ 0.722e-6■■■■■ 39.7
DKC1O60832 PDE9A-220ENST00000468805 1721 ntTSL 1 (best)19.57■□□□□ 0.722e-6■■■■■ 39.7
DKC1O60832 PHGDH-230ENST00000641927 1678 nt19.53■□□□□ 0.721e-16■■■■■ 39.7
DKC1O60832 PHGDH-232ENST00000641947 1774 nt19.42■□□□□ 0.71e-16■■■■■ 39.7
DKC1O60832 PHGDH-226ENST00000641756 2132 nt19.41■□□□□ 0.71e-16■■■■■ 39.7
DKC1O60832 PHGDH-227ENST00000641811 1031 nt19.39■□□□□ 0.691e-16■■■■■ 39.7
DKC1O60832 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.696e-9■■■■■ 39.7
DKC1O60832 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.661e-16■■■■■ 39.7
DKC1O60832 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.14■□□□□ 0.662e-6■■■■■ 39.7
DKC1O60832 PHGDH-234ENST00000642041 943 nt19.1■□□□□ 0.651e-16■■■■■ 39.7
DKC1O60832 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.06■□□□□ 0.641e-16■■■■■ 39.7
DKC1O60832 PDE9A-228ENST00000497805 1908 ntTSL 1 (best)18.68■□□□□ 0.582e-6■■■■■ 39.7
DKC1O60832 PHGDH-213ENST00000641272 758 nt18.66■□□□□ 0.581e-16■■■■■ 39.7
DKC1O60832 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.59■□□□□ 0.571e-16■■■■■ 39.7
DKC1O60832 TELO2-207ENST00000568240 1327 ntTSL 1 (best)18.52■□□□□ 0.565e-13■■■■■ 39.7
DKC1O60832 PHGDH-211ENST00000641213 2053 nt18.48■□□□□ 0.551e-16■■■■■ 39.7
DKC1O60832 PHGDH-229ENST00000641891 2175 nt18.32■□□□□ 0.521e-16■■■■■ 39.7
DKC1O60832 PHGDH-216ENST00000641375 2196 nt18.16■□□□□ 0.51e-16■■■■■ 39.7
DKC1O60832 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.79■□□□□ 0.441e-16■■■■■ 39.7
DKC1O60832 PDE9A-226ENST00000495343 1663 ntTSL 517■□□□□ 0.312e-6■■■■■ 39.7
DKC1O60832 PDE9A-219ENST00000467403 1661 ntTSL 1 (best)16.53■□□□□ 0.242e-6■■■■■ 39.7
DKC1O60832 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.48■□□□□ 0.236e-9■■■■■ 39.7
DKC1O60832 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.37■□□□□ 0.212e-6■■■■■ 39.7
DKC1O60832 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.03■□□□□ 0.161e-16■■■■■ 39.7
DKC1O60832 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.15e-13■■■■■ 39.7
DKC1O60832 PHGDH-203ENST00000462324 767 ntTSL 514.79□□□□□ -0.041e-16■■■■■ 39.7
DKC1O60832 PHGDH-218ENST00000641491 986 nt14.58□□□□□ -0.081e-16■■■■■ 39.7
DKC1O60832 PHGDH-220ENST00000641570 1036 nt14.58□□□□□ -0.081e-16■■■■■ 39.7
DKC1O60832 PHGDH-233ENST00000642021 2794 nt14.56□□□□□ -0.081e-16■■■■■ 39.7
DKC1O60832 PHGDH-221ENST00000641573 1180 nt14.52□□□□□ -0.091e-16■■■■■ 39.7
DKC1O60832 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.21□□□□□ -0.132e-6■■■■■ 39.7
DKC1O60832 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.7□□□□□ -0.222e-6■■■■■ 39.7
DKC1O60832 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.69□□□□□ -0.221e-16■■■■■ 39.7
DKC1O60832 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC13.19□□□□□ -0.32e-6■■■■■ 39.7
DKC1O60832 PHGDH-201ENST00000369407 3180 ntTSL 212.62□□□□□ -0.391e-16■■■■■ 39.7
DKC1O60832 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC12.6□□□□□ -0.391e-16■■■■■ 39.7
DKC1O60832 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.411e-16■■■■■ 39.7
DKC1O60832 PDE9A-224ENST00000489319 3412 ntTSL 212.13□□□□□ -0.472e-6■■■■■ 39.7
DKC1O60832 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC11.86□□□□□ -0.512e-6■■■■■ 39.7
DKC1O60832 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC11.86□□□□□ -0.512e-6■■■■■ 39.7
DKC1O60832 PHGDH-224ENST00000641711 712 nt11.37□□□□□ -0.591e-16■■■■■ 39.7
DKC1O60832 PDE9A-204ENST00000335512 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.612e-6■■■■■ 39.7
DKC1O60832 PHGDH-222ENST00000641587 566 nt11.08□□□□□ -0.641e-16■■■■■ 39.7
DKC1O60832 PHGDH-215ENST00000641371 725 nt10.87□□□□□ -0.671e-16■■■■■ 39.7
DKC1O60832 PHGDH-212ENST00000641247 710 nt10.68□□□□□ -0.71e-16■■■■■ 39.7
DKC1O60832 PHGDH-206ENST00000493622 742 ntTSL 59.84□□□□□ -0.831e-16■■■■■ 39.7
DKC1O60832 PHGDH-219ENST00000641513 735 nt9.79□□□□□ -0.841e-16■■■■■ 39.7
DKC1O60832 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC9.43□□□□□ -0.91e-16■■■■■ 39.7
DKC1O60832 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.951e-16■■■■■ 39.7
DKC1O60832 CPEB4-205ENST00000519152 441 ntTSL 38.41□□□□□ -1.061e-16■■■■■ 39.7
DKC1O60832 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.071e-16■■■■■ 39.7
DKC1O60832 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.29□□□□□ -1.241e-16■■■■■ 39.7
DKC1O60832 PDE9A-218ENST00000467162 803 ntTSL 35.97□□□□□ -1.452e-6■■■■■ 39.7
DKC1O60832 CPEB4-210ENST00000522344 481 ntTSL 23.21□□□□□ -1.91e-16■■■■■ 39.7
DKC1O60832 SHANK2-217ENST00000498519 510 ntTSL 315.36■□□□□ 0.054e-7■■■■■ 39.7
DKC1O60832 ARHGEF16-205ENST00000445297 836 ntTSL 326.04■■□□□ 1.762e-8■■■■■ 39.6
DKC1O60832 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.332e-8■■■■■ 39.6
DKC1O60832 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.9■□□□□ 0.142e-8■■■■■ 39.6
DKC1O60832 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.12e-8■■■■■ 39.6
DKC1O60832 CYP4F3-207ENST00000592279 2078 ntTSL 219.77■□□□□ 0.764e-7■■■■■ 39.6
DKC1O60832 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.464e-7■■■■■ 39.6
DKC1O60832 CYP4F3-204ENST00000587360 559 ntTSL 417.64■□□□□ 0.414e-7■■■■■ 39.6
DKC1O60832 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.184e-7■■■■■ 39.6
DKC1O60832 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.034e-7■■■■■ 39.6
DKC1O60832 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.324e-7■■■■■ 39.6
DKC1O60832 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.755e-7■■■■■ 39.5
DKC1O60832 CRIP2-211ENST00000552643 1383 ntTSL 227.49■■□□□ 1.995e-7■■■■■ 39.5
Retrieved 100 of 8,567 protein–RNA pairs in 181.6 ms