RNA–Protein interactions for RNA: ENST00000398232.7

PDE9A-211, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-211ENST00000398232 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
PDE9A-211ENST00000398232 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
PDE9A-211ENST00000398232 ABCC9O60706 1549 aa25.79■■□□□ 1.72
PDE9A-211ENST00000398232 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
PDE9A-211ENST00000398232 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
PDE9A-211ENST00000398232 NACADO15069 1562 aa24.45■■□□□ 1.5
PDE9A-211ENST00000398232 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
PDE9A-211ENST00000398232 MYO15BQ96JP2 1530 aa24.19■■□□□ 1.46
PDE9A-211ENST00000398232 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
PDE9A-211ENST00000398232 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
PDE9A-211ENST00000398232 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
PDE9A-211ENST00000398232 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
PDE9A-211ENST00000398232 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
PDE9A-211ENST00000398232 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
PDE9A-211ENST00000398232 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
PDE9A-211ENST00000398232 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
PDE9A-211ENST00000398232 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
PDE9A-211ENST00000398232 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
PDE9A-211ENST00000398232 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
PDE9A-211ENST00000398232 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
PDE9A-211ENST00000398232 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
PDE9A-211ENST00000398232 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
PDE9A-211ENST00000398232 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
PDE9A-211ENST00000398232 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
PDE9A-211ENST00000398232 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
PDE9A-211ENST00000398232 CUX2O14529 1486 aa22.38■■□□□ 1.17
PDE9A-211ENST00000398232 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
PDE9A-211ENST00000398232 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
PDE9A-211ENST00000398232 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
PDE9A-211ENST00000398232 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
PDE9A-211ENST00000398232 WIZO95785 1651 aa22.15■■□□□ 1.14
PDE9A-211ENST00000398232 NESP48681 1621 aa22.09■■□□□ 1.13
PDE9A-211ENST00000398232 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
PDE9A-211ENST00000398232 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
PDE9A-211ENST00000398232 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
PDE9A-211ENST00000398232 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
PDE9A-211ENST00000398232 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
PDE9A-211ENST00000398232 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
PDE9A-211ENST00000398232 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
PDE9A-211ENST00000398232 CFTRP13569 1480 aa21.67■■□□□ 1.06
PDE9A-211ENST00000398232 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
PDE9A-211ENST00000398232 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
PDE9A-211ENST00000398232 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
PDE9A-211ENST00000398232 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
PDE9A-211ENST00000398232 WDR62O43379 1518 aa21.6■■□□□ 1.05
PDE9A-211ENST00000398232 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
PDE9A-211ENST00000398232 TRIM41Q8WV44 630 aa21.53■■□□□ 1.04
PDE9A-211ENST00000398232 URB2Q14146 1524 aaKnown RBP21.42■■□□□ 1.02
PDE9A-211ENST00000398232 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
PDE9A-211ENST00000398232 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
PDE9A-211ENST00000398232 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
PDE9A-211ENST00000398232 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
PDE9A-211ENST00000398232 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
PDE9A-211ENST00000398232 IFT140Q96RY7 1462 aa21.17■□□□□ 0.98
PDE9A-211ENST00000398232 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
PDE9A-211ENST00000398232 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
PDE9A-211ENST00000398232 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
PDE9A-211ENST00000398232 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
PDE9A-211ENST00000398232 CUX1P39880 1505 aa21■□□□□ 0.95
PDE9A-211ENST00000398232 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
PDE9A-211ENST00000398232 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
PDE9A-211ENST00000398232 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
PDE9A-211ENST00000398232 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
PDE9A-211ENST00000398232 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.95
PDE9A-211ENST00000398232 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.94
PDE9A-211ENST00000398232 SOGA1O94964 1423 aa20.94■□□□□ 0.94
PDE9A-211ENST00000398232 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
PDE9A-211ENST00000398232 WDR97A6NE52 1622 aa20.89■□□□□ 0.94
PDE9A-211ENST00000398232 CHD1O14646 1710 aa20.89■□□□□ 0.93
PDE9A-211ENST00000398232 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
PDE9A-211ENST00000398232 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
PDE9A-211ENST00000398232 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
PDE9A-211ENST00000398232 PBRM1Q86U86 1689 aa20.78■□□□□ 0.92
PDE9A-211ENST00000398232 FBLN2P98095 1184 aa20.77■□□□□ 0.92
PDE9A-211ENST00000398232 TOP2BQ02880 1626 aa20.77■□□□□ 0.91
PDE9A-211ENST00000398232 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
PDE9A-211ENST00000398232 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
PDE9A-211ENST00000398232 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
PDE9A-211ENST00000398232 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
PDE9A-211ENST00000398232 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
PDE9A-211ENST00000398232 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
PDE9A-211ENST00000398232 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
PDE9A-211ENST00000398232 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
PDE9A-211ENST00000398232 ARAP1Q96P48 1450 aa20.71■□□□□ 0.91
PDE9A-211ENST00000398232 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
PDE9A-211ENST00000398232 SYNJ2O15056 1496 aa20.64■□□□□ 0.9
PDE9A-211ENST00000398232 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
PDE9A-211ENST00000398232 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
PDE9A-211ENST00000398232 ADAMTS12P58397 1594 aa20.54■□□□□ 0.88
PDE9A-211ENST00000398232 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
PDE9A-211ENST00000398232 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
PDE9A-211ENST00000398232 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
PDE9A-211ENST00000398232 CEP170Q5SW79 1584 aa20.41■□□□□ 0.86
PDE9A-211ENST00000398232 NUP160Q12769 1436 aa20.39■□□□□ 0.85
PDE9A-211ENST00000398232 KIF27Q86VH2 1401 aa20.33■□□□□ 0.85
PDE9A-211ENST00000398232 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
PDE9A-211ENST00000398232 CUL7Q14999 1698 aa20.31■□□□□ 0.84
PDE9A-211ENST00000398232 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
PDE9A-211ENST00000398232 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
PDE9A-211ENST00000398232 IGF1RP08069 1367 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms