RNA–Protein interactions for RNA: ENST00000367218.7

ATP2B4-204, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 8,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-204ENST00000367218 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
ATP2B4-204ENST00000367218 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
ATP2B4-204ENST00000367218 NISCHQ9Y2I1 1504 aa12.07□□□□□ -0.48
ATP2B4-204ENST00000367218 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
ATP2B4-204ENST00000367218 MYT1Q01538 1121 aa11.92□□□□□ -0.5
ATP2B4-204ENST00000367218 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
ATP2B4-204ENST00000367218 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
ATP2B4-204ENST00000367218 SHROOM4Q9ULL8 1493 aa11.71□□□□□ -0.54
ATP2B4-204ENST00000367218 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
ATP2B4-204ENST00000367218 CCER1Q8TC90 406 aaPredicted RBP11.53□□□□□ -0.56
ATP2B4-204ENST00000367218 APLP2Q06481 763 aa11.51□□□□□ -0.57
ATP2B4-204ENST00000367218 ERICH6Q7L0X2 663 aa11.51□□□□□ -0.57
ATP2B4-204ENST00000367218 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
ATP2B4-204ENST00000367218 HRCP23327 699 aa11.38□□□□□ -0.59
ATP2B4-204ENST00000367218 FAM9AQ8IZU1 332 aaPredicted RBP11.29□□□□□ -0.6
ATP2B4-204ENST00000367218 NEFLP07196 543 aa11.29□□□□□ -0.6
ATP2B4-204ENST00000367218 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
ATP2B4-204ENST00000367218 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
ATP2B4-204ENST00000367218 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
ATP2B4-204ENST00000367218 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
ATP2B4-204ENST00000367218 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
ATP2B4-204ENST00000367218 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
ATP2B4-204ENST00000367218 CHIC1Q5VXU3 224 aa10.92□□□□□ -0.66
ATP2B4-204ENST00000367218 DIEXFQ68CQ4 756 aaKnown RBP10.91□□□□□ -0.66
ATP2B4-204ENST00000367218 DAXXQ9UER7 740 aaPredicted RBP10.91□□□□□ -0.66
ATP2B4-204ENST00000367218 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.67
ATP2B4-204ENST00000367218 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
ATP2B4-204ENST00000367218 GTF3C3Q9Y5Q9 886 aa10.82□□□□□ -0.68
ATP2B4-204ENST00000367218 LOC105371045A0A1W2PR82 267 aa10.82□□□□□ -0.68
ATP2B4-204ENST00000367218 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
ATP2B4-204ENST00000367218 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
ATP2B4-204ENST00000367218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
ATP2B4-204ENST00000367218 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.7
ATP2B4-204ENST00000367218 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
ATP2B4-204ENST00000367218 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
ATP2B4-204ENST00000367218 CDK11AQ9UQ88 783 aaPredicted RBP10.65□□□□□ -0.71
ATP2B4-204ENST00000367218 ITGAEP38570 1179 aa10.62□□□□□ -0.71
ATP2B4-204ENST00000367218 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
ATP2B4-204ENST00000367218 BCANQ96GW7 911 aa10.56□□□□□ -0.72
ATP2B4-204ENST00000367218 POLR3GLQ9BT43 218 aa10.56□□□□□ -0.72
ATP2B4-204ENST00000367218 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
ATP2B4-204ENST00000367218 ANP32CO43423 234 aa10.55□□□□□ -0.72
ATP2B4-204ENST00000367218 ANP32AP39687 249 aaKnown RBP10.48□□□□□ -0.73
ATP2B4-204ENST00000367218 SCAF1Q9H7N4 1312 aaKnown RBP10.44□□□□□ -0.74
ATP2B4-204ENST00000367218 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
ATP2B4-204ENST00000367218 GLIPR1L2Q4G1C9 344 aa10.41□□□□□ -0.74
ATP2B4-204ENST00000367218 CNGB1Q14028 1251 aaPredicted RBP10.4□□□□□ -0.74
ATP2B4-204ENST00000367218 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
ATP2B4-204ENST00000367218 FKBP8Q14318 412 aa10.36□□□□□ -0.75
ATP2B4-204ENST00000367218 EIF5BO60841 1220 aaKnown RBP10.33□□□□□ -0.76
ATP2B4-204ENST00000367218 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
ATP2B4-204ENST00000367218 ANP32EQ9BTT0 268 aa10.27□□□□□ -0.76
ATP2B4-204ENST00000367218 CCDC180Q9P1Z9 1646 aa10.26□□□□□ -0.77
ATP2B4-204ENST00000367218 ANP32BQ92688 251 aaKnown RBP10.26□□□□□ -0.77
ATP2B4-204ENST00000367218 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
ATP2B4-204ENST00000367218 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
ATP2B4-204ENST00000367218 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
ATP2B4-204ENST00000367218 CANXP27824 592 aaKnown RBP10.23□□□□□ -0.77
ATP2B4-204ENST00000367218 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
ATP2B4-204ENST00000367218 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.78
ATP2B4-204ENST00000367218 NBR1Q14596 966 aa10.19□□□□□ -0.78
ATP2B4-204ENST00000367218 MIER1Q8N108 512 aa10.18□□□□□ -0.78
ATP2B4-204ENST00000367218 UPF2Q9HAU5 1272 aaKnown RBP10.18□□□□□ -0.78
ATP2B4-204ENST00000367218 TONSLQ96HA7 1378 aa10.17□□□□□ -0.78
ATP2B4-204ENST00000367218 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
ATP2B4-204ENST00000367218 CCDC136Q96JN2 1154 aa10.16□□□□□ -0.78
ATP2B4-204ENST00000367218 DDX10Q13206 875 aaKnown RBP10.15□□□□□ -0.79
ATP2B4-204ENST00000367218 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
ATP2B4-204ENST00000367218 HSP90AA1P07900 732 aaKnown RBP10.1□□□□□ -0.79
ATP2B4-204ENST00000367218 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
ATP2B4-204ENST00000367218 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
ATP2B4-204ENST00000367218 NEFMP07197 916 aa10.08□□□□□ -0.8
ATP2B4-204ENST00000367218 MYO15BQ96JP2 1530 aa10.07□□□□□ -0.8
ATP2B4-204ENST00000367218 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
ATP2B4-204ENST00000367218 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
ATP2B4-204ENST00000367218 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
ATP2B4-204ENST00000367218 MRS2Q9HD23 443 aa10.03□□□□□ -0.8
ATP2B4-204ENST00000367218 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
ATP2B4-204ENST00000367218 TMC1Q8TDI8 760 aa10.03□□□□□ -0.8
ATP2B4-204ENST00000367218 BECN1Q14457 450 aa10.02□□□□□ -0.81
ATP2B4-204ENST00000367218 SUPT16HQ9Y5B9 1047 aaKnown RBP10.01□□□□□ -0.81
ATP2B4-204ENST00000367218 TRIM44Q96DX7 344 aaPredicted RBP9.98□□□□□ -0.81
ATP2B4-204ENST00000367218 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
ATP2B4-204ENST00000367218 IRX6P78412 446 aaPredicted RBP9.98□□□□□ -0.81
ATP2B4-204ENST00000367218 EEA1Q15075 1411 aa9.98□□□□□ -0.81
ATP2B4-204ENST00000367218 PPP4R2Q9NY27 417 aa9.97□□□□□ -0.81
ATP2B4-204ENST00000367218 TNNT2P45379 298 aaPredicted RBP9.97□□□□□ -0.81
ATP2B4-204ENST00000367218 CLIP1P30622 1438 aa9.95□□□□□ -0.82
ATP2B4-204ENST00000367218 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATP2B4-204ENST00000367218 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
ATP2B4-204ENST00000367218 ARXQ96QS3 562 aa9.93□□□□□ -0.82
ATP2B4-204ENST00000367218 WDR43Q15061 677 aaKnown RBP eCLIP9.93□□□□□ -0.82
ATP2B4-204ENST00000367218 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
ATP2B4-204ENST00000367218 GOLGA6L22H0YM25 854 aa9.92□□□□□ -0.82
ATP2B4-204ENST00000367218 GOLGA3Q08378 1498 aa9.92□□□□□ -0.82
ATP2B4-204ENST00000367218 DEKP35659 375 aaKnown RBP9.91□□□□□ -0.82
ATP2B4-204ENST00000367218 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.83
ATP2B4-204ENST00000367218 ABCC9O60706 1549 aa9.89□□□□□ -0.83
ATP2B4-204ENST00000367218 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
ATP2B4-204ENST00000367218 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms