RNA–Protein interactions for RNA: ENST00000497805.5

PDE9A-228, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best)

Gene PDE9A, Length 1,908 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-228ENST00000497805 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
PDE9A-228ENST00000497805 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
PDE9A-228ENST00000497805 ZCCHC6Q5VYS8 1495 aaKnown RBP32.68■■■□□ 2.82
PDE9A-228ENST00000497805 ABCC9O60706 1549 aa32.43■■■□□ 2.78
PDE9A-228ENST00000497805 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
PDE9A-228ENST00000497805 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
PDE9A-228ENST00000497805 MYO15BQ96JP2 1530 aa31.89■■■□□ 2.69
PDE9A-228ENST00000497805 NACADO15069 1562 aa31.76■■■□□ 2.68
PDE9A-228ENST00000497805 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
PDE9A-228ENST00000497805 RB1CC1Q8TDY2 1594 aa31.55■■■□□ 2.64
PDE9A-228ENST00000497805 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
PDE9A-228ENST00000497805 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
PDE9A-228ENST00000497805 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
PDE9A-228ENST00000497805 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
PDE9A-228ENST00000497805 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
PDE9A-228ENST00000497805 SUPT5HO00267 1087 aaKnown RBP30.2■■■□□ 2.43
PDE9A-228ENST00000497805 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
PDE9A-228ENST00000497805 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
PDE9A-228ENST00000497805 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
PDE9A-228ENST00000497805 SMARCA4P51532 1647 aa30.01■■■□□ 2.39
PDE9A-228ENST00000497805 WIZO95785 1651 aa29.87■■■□□ 2.37
PDE9A-228ENST00000497805 EIF4G1Q04637 1599 aaKnown RBP29.74■■■□□ 2.35
PDE9A-228ENST00000497805 PEG3Q9GZU2 1588 aa29.66■■■□□ 2.34
PDE9A-228ENST00000497805 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
PDE9A-228ENST00000497805 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.31
PDE9A-228ENST00000497805 SMARCA2P51531 1590 aa29.5■■■□□ 2.31
PDE9A-228ENST00000497805 CC2D2AQ9P2K1 1620 aa29.37■■■□□ 2.29
PDE9A-228ENST00000497805 BAZ1BQ9UIG0 1483 aaKnown RBP29.35■■■□□ 2.29
PDE9A-228ENST00000497805 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
PDE9A-228ENST00000497805 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
PDE9A-228ENST00000497805 CCDC88BA6NC98 1476 aa29.2■■■□□ 2.26
PDE9A-228ENST00000497805 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
PDE9A-228ENST00000497805 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
PDE9A-228ENST00000497805 CFTRP13569 1480 aa28.61■■■□□ 2.17
PDE9A-228ENST00000497805 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
PDE9A-228ENST00000497805 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
PDE9A-228ENST00000497805 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
PDE9A-228ENST00000497805 NESP48681 1621 aa28.43■■■□□ 2.14
PDE9A-228ENST00000497805 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
PDE9A-228ENST00000497805 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
PDE9A-228ENST00000497805 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
PDE9A-228ENST00000497805 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
PDE9A-228ENST00000497805 FANCD2Q9BXW9 1451 aa28.24■■■□□ 2.11
PDE9A-228ENST00000497805 TOP2BQ02880 1626 aa28.17■■■□□ 2.1
PDE9A-228ENST00000497805 BIVM-ERCC5R4GMW8 1640 aa28.16■■■□□ 2.1
PDE9A-228ENST00000497805 CUX1P39880 1505 aa28.16■■■□□ 2.1
PDE9A-228ENST00000497805 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
PDE9A-228ENST00000497805 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
PDE9A-228ENST00000497805 CEP164Q9UPV0 1460 aa28.07■■■□□ 2.08
PDE9A-228ENST00000497805 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
PDE9A-228ENST00000497805 URB2Q14146 1524 aaKnown RBP27.94■■■□□ 2.06
PDE9A-228ENST00000497805 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
PDE9A-228ENST00000497805 SOGA1O94964 1423 aa27.92■■■□□ 2.06
PDE9A-228ENST00000497805 FAM9AQ8IZU1 332 aaPredicted RBP27.9■■■□□ 2.06
PDE9A-228ENST00000497805 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
PDE9A-228ENST00000497805 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
PDE9A-228ENST00000497805 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
PDE9A-228ENST00000497805 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
PDE9A-228ENST00000497805 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
PDE9A-228ENST00000497805 EEA1Q15075 1411 aa27.73■■■□□ 2.03
PDE9A-228ENST00000497805 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
PDE9A-228ENST00000497805 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
PDE9A-228ENST00000497805 WDR62O43379 1518 aa27.7■■■□□ 2.03
PDE9A-228ENST00000497805 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
PDE9A-228ENST00000497805 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
PDE9A-228ENST00000497805 CUX2O14529 1486 aa27.61■■■□□ 2.01
PDE9A-228ENST00000497805 CSRNP3Q8WYN3 585 aa27.61■■■□□ 2.01
PDE9A-228ENST00000497805 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
PDE9A-228ENST00000497805 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
PDE9A-228ENST00000497805 TARBP1Q13395 1621 aaKnown RBP27.57■■■□□ 2
PDE9A-228ENST00000497805 EHMT2Q96KQ7 1210 aa27.53■■■□□ 2
PDE9A-228ENST00000497805 KIF21BO75037 1637 aa27.48■■□□□ 1.99
PDE9A-228ENST00000497805 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
PDE9A-228ENST00000497805 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
PDE9A-228ENST00000497805 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
PDE9A-228ENST00000497805 IGF1RP08069 1367 aa27.4■■□□□ 1.98
PDE9A-228ENST00000497805 TDRD9Q8NDG6 1382 aaKnown RBP27.4■■□□□ 1.98
PDE9A-228ENST00000497805 GOLGA3Q08378 1498 aa27.38■■□□□ 1.97
PDE9A-228ENST00000497805 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
PDE9A-228ENST00000497805 GAPVD1Q14C86 1478 aa27.34■■□□□ 1.97
PDE9A-228ENST00000497805 ZNF608Q9ULD9 1512 aaPredicted RBP27.33■■□□□ 1.97
PDE9A-228ENST00000497805 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
PDE9A-228ENST00000497805 AQRO60306 1485 aaKnown RBP eCLIP27.29■■□□□ 1.96
PDE9A-228ENST00000497805 PBRM1Q86U86 1689 aa27.29■■□□□ 1.96
PDE9A-228ENST00000497805 CUL7Q14999 1698 aa27.25■■□□□ 1.95
PDE9A-228ENST00000497805 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
PDE9A-228ENST00000497805 CARMIL1Q5VZK9 1371 aa27.24■■□□□ 1.95
PDE9A-228ENST00000497805 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
PDE9A-228ENST00000497805 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
PDE9A-228ENST00000497805 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
PDE9A-228ENST00000497805 CEP162Q5TB80 1403 aa27.1■■□□□ 1.93
PDE9A-228ENST00000497805 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
PDE9A-228ENST00000497805 SNAPC4Q5SXM2 1469 aa27.03■■□□□ 1.92
PDE9A-228ENST00000497805 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
PDE9A-228ENST00000497805 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
PDE9A-228ENST00000497805 CTTNBP2Q8WZ74 1663 aa26.95■■□□□ 1.91
PDE9A-228ENST00000497805 CLIP1P30622 1438 aa26.93■■□□□ 1.9
PDE9A-228ENST00000497805 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
PDE9A-228ENST00000497805 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
PDE9A-228ENST00000497805 GRIN2AQ12879 1464 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms