RNA–Protein interactions for RNA: ENST00000545827.6

LMF1-203, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 2,731 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-203ENST00000545827 NISCHQ9Y2I1 1504 aa31.13■■■□□ 2.57
LMF1-203ENST00000545827 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
LMF1-203ENST00000545827 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
LMF1-203ENST00000545827 HRCP23327 699 aa26.92■■□□□ 1.9
LMF1-203ENST00000545827 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
LMF1-203ENST00000545827 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.85
LMF1-203ENST00000545827 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
LMF1-203ENST00000545827 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
LMF1-203ENST00000545827 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
LMF1-203ENST00000545827 CCDC180Q9P1Z9 1646 aa26.29■■□□□ 1.8
LMF1-203ENST00000545827 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
LMF1-203ENST00000545827 LOC105371045A0A1W2PR82 267 aa26■■□□□ 1.75
LMF1-203ENST00000545827 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
LMF1-203ENST00000545827 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
LMF1-203ENST00000545827 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
LMF1-203ENST00000545827 PELP1Q8IZL8 1130 aaKnown RBP25.44■■□□□ 1.66
LMF1-203ENST00000545827 SCAF1Q9H7N4 1312 aaKnown RBP25.29■■□□□ 1.64
LMF1-203ENST00000545827 FAM9AQ8IZU1 332 aaPredicted RBP25.23■■□□□ 1.63
LMF1-203ENST00000545827 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
LMF1-203ENST00000545827 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
LMF1-203ENST00000545827 ABCC9O60706 1549 aa25.07■■□□□ 1.6
LMF1-203ENST00000545827 SLC24A1O60721 1099 aa25.02■■□□□ 1.6
LMF1-203ENST00000545827 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
LMF1-203ENST00000545827 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
LMF1-203ENST00000545827 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
LMF1-203ENST00000545827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.8■■□□□ 1.56
LMF1-203ENST00000545827 ACIN1Q9UKV3 1341 aaKnown RBP24.79■■□□□ 1.56
LMF1-203ENST00000545827 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
LMF1-203ENST00000545827 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
LMF1-203ENST00000545827 GTF3C3Q9Y5Q9 886 aa24.62■■□□□ 1.53
LMF1-203ENST00000545827 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
LMF1-203ENST00000545827 CENPBP07199 599 aaPredicted RBP24.58■■□□□ 1.53
LMF1-203ENST00000545827 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
LMF1-203ENST00000545827 NACADO15069 1562 aa24.43■■□□□ 1.5
LMF1-203ENST00000545827 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
LMF1-203ENST00000545827 MYT1Q01538 1121 aa24.33■■□□□ 1.49
LMF1-203ENST00000545827 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
LMF1-203ENST00000545827 YTHDC1Q96MU7 727 aaKnown RBP24.26■■□□□ 1.47
LMF1-203ENST00000545827 WIZO95785 1651 aa24.25■■□□□ 1.47
LMF1-203ENST00000545827 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
LMF1-203ENST00000545827 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
LMF1-203ENST00000545827 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.453e-6■■■■■ 66.3
LMF1-203ENST00000545827 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
LMF1-203ENST00000545827 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
LMF1-203ENST00000545827 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
LMF1-203ENST00000545827 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
LMF1-203ENST00000545827 UBTFP17480 764 aaKnown RBP24■■□□□ 1.43
LMF1-203ENST00000545827 MIER1Q8N108 512 aa23.97■■□□□ 1.43
LMF1-203ENST00000545827 SOGA1O94964 1423 aa23.93■■□□□ 1.42
LMF1-203ENST00000545827 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
LMF1-203ENST00000545827 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
LMF1-203ENST00000545827 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.42
LMF1-203ENST00000545827 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
LMF1-203ENST00000545827 UNC13AQ9UPW8 1703 aa23.83■■□□□ 1.41
LMF1-203ENST00000545827 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
LMF1-203ENST00000545827 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
LMF1-203ENST00000545827 EEA1Q15075 1411 aa23.71■■□□□ 1.39
LMF1-203ENST00000545827 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
LMF1-203ENST00000545827 SMARCA2P51531 1590 aa23.68■■□□□ 1.38
LMF1-203ENST00000545827 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
LMF1-203ENST00000545827 APLP2Q06481 763 aa23.59■■□□□ 1.37
LMF1-203ENST00000545827 BICRAQ9NZM4 1560 aa23.57■■□□□ 1.36
LMF1-203ENST00000545827 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
LMF1-203ENST00000545827 CLIP1P30622 1438 aa23.53■■□□□ 1.36
LMF1-203ENST00000545827 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
LMF1-203ENST00000545827 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
LMF1-203ENST00000545827 VPS8Q8N3P4 1428 aa23.44■■□□□ 1.34
LMF1-203ENST00000545827 CLSPNQ9HAW4 1339 aa23.39■■□□□ 1.33
LMF1-203ENST00000545827 KIF21BO75037 1637 aa23.35■■□□□ 1.33
LMF1-203ENST00000545827 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
LMF1-203ENST00000545827 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
LMF1-203ENST00000545827 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
LMF1-203ENST00000545827 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
LMF1-203ENST00000545827 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
LMF1-203ENST00000545827 ANP32EQ9BTT0 268 aa23.16■■□□□ 1.3
LMF1-203ENST00000545827 BCANQ96GW7 911 aa23.14■■□□□ 1.3
LMF1-203ENST00000545827 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
LMF1-203ENST00000545827 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
LMF1-203ENST00000545827 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
LMF1-203ENST00000545827 ITGAEP38570 1179 aa23.1■■□□□ 1.29
LMF1-203ENST00000545827 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
LMF1-203ENST00000545827 FKBP8Q14318 412 aa22.99■■□□□ 1.27
LMF1-203ENST00000545827 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
LMF1-203ENST00000545827 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
LMF1-203ENST00000545827 CCNB3Q8WWL7 1395 aa22.92■■□□□ 1.26
LMF1-203ENST00000545827 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
LMF1-203ENST00000545827 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
LMF1-203ENST00000545827 BCL11AQ9H165 835 aa22.88■■□□□ 1.25
LMF1-203ENST00000545827 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
LMF1-203ENST00000545827 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
LMF1-203ENST00000545827 NEFLP07196 543 aa22.86■■□□□ 1.25
LMF1-203ENST00000545827 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
LMF1-203ENST00000545827 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
LMF1-203ENST00000545827 CUX2O14529 1486 aa22.84■■□□□ 1.25
LMF1-203ENST00000545827 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
LMF1-203ENST00000545827 RBM19Q9Y4C8 960 aaKnown RBP22.78■■□□□ 1.24
LMF1-203ENST00000545827 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
LMF1-203ENST00000545827 SIN3AQ96ST3 1273 aa22.76■■□□□ 1.23
LMF1-203ENST00000545827 HIRIP3Q9BW71 556 aaPredicted RBP22.75■■□□□ 1.23
LMF1-203ENST00000545827 BIVM-ERCC5R4GMW8 1640 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms