RNA–Protein interactions for RNA: ENST00000398236.7

PDE9A-213, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-213ENST00000398236 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
PDE9A-213ENST00000398236 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
PDE9A-213ENST00000398236 ABCC9O60706 1549 aa39.2■■■■□ 3.87
PDE9A-213ENST00000398236 DCAF8L2P0C7V8 631 aa37.86■■■■□ 3.65
PDE9A-213ENST00000398236 RB1CC1Q8TDY2 1594 aa37.57■■■■□ 3.6
PDE9A-213ENST00000398236 NACADO15069 1562 aa37.49■■■■□ 3.59
PDE9A-213ENST00000398236 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
PDE9A-213ENST00000398236 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
PDE9A-213ENST00000398236 DCAF1Q9Y4B6 1507 aa37.07■■■■□ 3.53
PDE9A-213ENST00000398236 UNC13AQ9UPW8 1703 aa36.86■■■■□ 3.49
PDE9A-213ENST00000398236 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
PDE9A-213ENST00000398236 SCRIBQ14160 1630 aa36.61■■■■□ 3.45
PDE9A-213ENST00000398236 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
PDE9A-213ENST00000398236 DNAJC5BQ9UF47 199 aa35.99■■■■□ 3.35
PDE9A-213ENST00000398236 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
PDE9A-213ENST00000398236 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.27
PDE9A-213ENST00000398236 CC2D2AQ9P2K1 1620 aa35.4■■■■□ 3.26
PDE9A-213ENST00000398236 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
PDE9A-213ENST00000398236 SMARCA4P51532 1647 aa34.91■■■■□ 3.18
PDE9A-213ENST00000398236 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
PDE9A-213ENST00000398236 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
PDE9A-213ENST00000398236 ATAD2BQ9ULI0 1458 aa34.7■■■■□ 3.14
PDE9A-213ENST00000398236 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
PDE9A-213ENST00000398236 SMARCA2P51531 1590 aa34.6■■■■□ 3.13
PDE9A-213ENST00000398236 PEG3Q9GZU2 1588 aa34.46■■■■□ 3.11
PDE9A-213ENST00000398236 BAZ1BQ9UIG0 1483 aaKnown RBP34.44■■■■□ 3.1
PDE9A-213ENST00000398236 WIZO95785 1651 aa34.43■■■■□ 3.1
PDE9A-213ENST00000398236 HMGXB3Q12766 1538 aa34.42■■■■□ 3.1
PDE9A-213ENST00000398236 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
PDE9A-213ENST00000398236 NESP48681 1621 aa33.95■■■■□ 3.03
PDE9A-213ENST00000398236 TOP2AP11388 1531 aaKnown RBP33.93■■■■□ 3.02
PDE9A-213ENST00000398236 SUPT5HO00267 1087 aaKnown RBP33.74■■■□□ 2.99
PDE9A-213ENST00000398236 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
PDE9A-213ENST00000398236 LAMC3Q9Y6N6 1575 aa33.7■■■□□ 2.98
PDE9A-213ENST00000398236 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
PDE9A-213ENST00000398236 CCDC88BA6NC98 1476 aa33.61■■■□□ 2.97
PDE9A-213ENST00000398236 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
PDE9A-213ENST00000398236 PDS5BQ9NTI5 1447 aa33.48■■■□□ 2.95
PDE9A-213ENST00000398236 CFTRP13569 1480 aa33.44■■■□□ 2.94
PDE9A-213ENST00000398236 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
PDE9A-213ENST00000398236 THOC2Q8NI27 1593 aaKnown RBP33.3■■■□□ 2.92
PDE9A-213ENST00000398236 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
PDE9A-213ENST00000398236 PRDM2Q13029 1718 aa33.23■■■□□ 2.91
PDE9A-213ENST00000398236 CUX2O14529 1486 aa33.21■■■□□ 2.91
PDE9A-213ENST00000398236 MRC2Q9UBG0 1479 aa33.16■■■□□ 2.9
PDE9A-213ENST00000398236 WDR62O43379 1518 aa33.02■■■□□ 2.88
PDE9A-213ENST00000398236 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
PDE9A-213ENST00000398236 TOPBP1Q92547 1522 aa32.78■■■□□ 2.84
PDE9A-213ENST00000398236 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.83
PDE9A-213ENST00000398236 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
PDE9A-213ENST00000398236 CUX1P39880 1505 aa32.57■■■□□ 2.81
PDE9A-213ENST00000398236 POLA1P09884 1462 aaPredicted RBP32.5■■■□□ 2.79
PDE9A-213ENST00000398236 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
PDE9A-213ENST00000398236 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
PDE9A-213ENST00000398236 FGD5Q6ZNL6 1462 aa32.46■■■□□ 2.79
PDE9A-213ENST00000398236 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
PDE9A-213ENST00000398236 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
PDE9A-213ENST00000398236 SOGA1O94964 1423 aa32.4■■■□□ 2.78
PDE9A-213ENST00000398236 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
PDE9A-213ENST00000398236 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
PDE9A-213ENST00000398236 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.76
PDE9A-213ENST00000398236 EIF4G3O43432 1585 aaKnown RBP32.3■■■□□ 2.76
PDE9A-213ENST00000398236 TDRD9Q8NDG6 1382 aaKnown RBP32.28■■■□□ 2.76
PDE9A-213ENST00000398236 TOP2BQ02880 1626 aa32.27■■■□□ 2.76
PDE9A-213ENST00000398236 BIVM-ERCC5R4GMW8 1640 aa32.25■■■□□ 2.75
PDE9A-213ENST00000398236 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
PDE9A-213ENST00000398236 WDR97A6NE52 1622 aa32.14■■■□□ 2.74
PDE9A-213ENST00000398236 ABCA10Q8WWZ4 1543 aa32.07■■■□□ 2.72
PDE9A-213ENST00000398236 FBLN2P98095 1184 aa32.02■■■□□ 2.72
PDE9A-213ENST00000398236 GAPVD1Q14C86 1478 aa32■■■□□ 2.71
PDE9A-213ENST00000398236 OSCARQ8IYS5 282 aa31.97■■■□□ 2.71
PDE9A-213ENST00000398236 PBRM1Q86U86 1689 aa31.97■■■□□ 2.71
PDE9A-213ENST00000398236 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
PDE9A-213ENST00000398236 ABCA5Q8WWZ7 1642 aa31.96■■■□□ 2.71
PDE9A-213ENST00000398236 GRIN2BQ13224 1484 aa31.95■■■□□ 2.71
PDE9A-213ENST00000398236 CHD1O14646 1710 aa31.94■■■□□ 2.7
PDE9A-213ENST00000398236 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
PDE9A-213ENST00000398236 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
PDE9A-213ENST00000398236 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
PDE9A-213ENST00000398236 SYNJ2O15056 1496 aa31.73■■■□□ 2.67
PDE9A-213ENST00000398236 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
PDE9A-213ENST00000398236 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
PDE9A-213ENST00000398236 ADAMTS12P58397 1594 aa31.66■■■□□ 2.66
PDE9A-213ENST00000398236 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
PDE9A-213ENST00000398236 IGF1RP08069 1367 aa31.57■■■□□ 2.64
PDE9A-213ENST00000398236 GRIN2AQ12879 1464 aa31.56■■■□□ 2.64
PDE9A-213ENST00000398236 RUSC2Q8N2Y8 1516 aa31.56■■■□□ 2.64
PDE9A-213ENST00000398236 CLASP1Q7Z460 1538 aa31.48■■■□□ 2.63
PDE9A-213ENST00000398236 RIMBP3CA6NJZ7 1639 aa31.47■■■□□ 2.63
PDE9A-213ENST00000398236 RIMBP3BA6NNM3 1639 aa31.47■■■□□ 2.63
PDE9A-213ENST00000398236 RIMBP3Q9UFD9 1639 aa31.47■■■□□ 2.63
PDE9A-213ENST00000398236 CEP170Q5SW79 1584 aa31.45■■■□□ 2.62
PDE9A-213ENST00000398236 ARHGEF11O15085 1522 aa31.43■■■□□ 2.62
PDE9A-213ENST00000398236 CUL7Q14999 1698 aa31.41■■■□□ 2.62
PDE9A-213ENST00000398236 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
PDE9A-213ENST00000398236 CARMIL1Q5VZK9 1371 aa31.39■■■□□ 2.61
PDE9A-213ENST00000398236 NUP160Q12769 1436 aa31.37■■■□□ 2.61
PDE9A-213ENST00000398236 CYB5RLQ6IPT4 315 aa31.27■■■□□ 2.6
PDE9A-213ENST00000398236 FAM9AQ8IZU1 332 aaPredicted RBP31.25■■■□□ 2.59
PDE9A-213ENST00000398236 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms