RNA–Protein interactions for RNA: ENST00000519152.5

CPEB4-205, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 3

Gene CPEB4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-205ENST00000519152 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
CPEB4-205ENST00000519152 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.48
CPEB4-205ENST00000519152 ABCC9O60706 1549 aa18.02■□□□□ 0.47
CPEB4-205ENST00000519152 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
CPEB4-205ENST00000519152 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
CPEB4-205ENST00000519152 NACADO15069 1562 aa17.02■□□□□ 0.32
CPEB4-205ENST00000519152 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
CPEB4-205ENST00000519152 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
CPEB4-205ENST00000519152 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
CPEB4-205ENST00000519152 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
CPEB4-205ENST00000519152 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
CPEB4-205ENST00000519152 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
CPEB4-205ENST00000519152 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
CPEB4-205ENST00000519152 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
CPEB4-205ENST00000519152 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
CPEB4-205ENST00000519152 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
CPEB4-205ENST00000519152 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
CPEB4-205ENST00000519152 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
CPEB4-205ENST00000519152 DNAJC5Q9H3Z4 198 aa15.86■□□□□ 0.13
CPEB4-205ENST00000519152 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
CPEB4-205ENST00000519152 CUX2O14529 1486 aa15.67■□□□□ 0.1
CPEB4-205ENST00000519152 ATAD2BQ9ULI0 1458 aa15.65■□□□□ 0.1
CPEB4-205ENST00000519152 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
CPEB4-205ENST00000519152 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
CPEB4-205ENST00000519152 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
CPEB4-205ENST00000519152 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
CPEB4-205ENST00000519152 NESP48681 1621 aa15.5■□□□□ 0.07
CPEB4-205ENST00000519152 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
CPEB4-205ENST00000519152 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
CPEB4-205ENST00000519152 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
CPEB4-205ENST00000519152 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
CPEB4-205ENST00000519152 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
CPEB4-205ENST00000519152 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
CPEB4-205ENST00000519152 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
CPEB4-205ENST00000519152 WDR62O43379 1518 aa15.18■□□□□ 0.02
CPEB4-205ENST00000519152 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
CPEB4-205ENST00000519152 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
CPEB4-205ENST00000519152 WIZO95785 1651 aa15.15■□□□□ 0.02
CPEB4-205ENST00000519152 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
CPEB4-205ENST00000519152 CFTRP13569 1480 aa15.04■□□□□ -0
CPEB4-205ENST00000519152 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
CPEB4-205ENST00000519152 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
CPEB4-205ENST00000519152 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
CPEB4-205ENST00000519152 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
CPEB4-205ENST00000519152 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
CPEB4-205ENST00000519152 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
CPEB4-205ENST00000519152 TRIM41Q8WV44 630 aa14.81□□□□□ -0.04
CPEB4-205ENST00000519152 ZNF608Q9ULD9 1512 aaPredicted RBP14.78□□□□□ -0.04
CPEB4-205ENST00000519152 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
CPEB4-205ENST00000519152 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
CPEB4-205ENST00000519152 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
CPEB4-205ENST00000519152 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
CPEB4-205ENST00000519152 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
CPEB4-205ENST00000519152 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
CPEB4-205ENST00000519152 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
CPEB4-205ENST00000519152 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
CPEB4-205ENST00000519152 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
CPEB4-205ENST00000519152 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
CPEB4-205ENST00000519152 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
CPEB4-205ENST00000519152 ABCC8Q09428 1581 aa14.62□□□□□ -0.07
CPEB4-205ENST00000519152 CHD1O14646 1710 aa14.61□□□□□ -0.07
CPEB4-205ENST00000519152 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
CPEB4-205ENST00000519152 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.08
CPEB4-205ENST00000519152 ARAP1Q96P48 1450 aa14.56□□□□□ -0.08
CPEB4-205ENST00000519152 CLASP1Q7Z460 1538 aa14.51□□□□□ -0.09
CPEB4-205ENST00000519152 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
CPEB4-205ENST00000519152 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
CPEB4-205ENST00000519152 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
CPEB4-205ENST00000519152 CUX1P39880 1505 aa14.45□□□□□ -0.1
CPEB4-205ENST00000519152 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
CPEB4-205ENST00000519152 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
CPEB4-205ENST00000519152 CYB5RLQ6IPT4 315 aa14.4□□□□□ -0.1
CPEB4-205ENST00000519152 SOGA1O94964 1423 aa14.4□□□□□ -0.1
CPEB4-205ENST00000519152 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
CPEB4-205ENST00000519152 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
CPEB4-205ENST00000519152 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
CPEB4-205ENST00000519152 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
CPEB4-205ENST00000519152 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
CPEB4-205ENST00000519152 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
CPEB4-205ENST00000519152 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
CPEB4-205ENST00000519152 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
CPEB4-205ENST00000519152 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
CPEB4-205ENST00000519152 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
CPEB4-205ENST00000519152 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
CPEB4-205ENST00000519152 FBLN2P98095 1184 aa14.22□□□□□ -0.13
CPEB4-205ENST00000519152 NUP160Q12769 1436 aa14.22□□□□□ -0.13
CPEB4-205ENST00000519152 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
CPEB4-205ENST00000519152 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
CPEB4-205ENST00000519152 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
CPEB4-205ENST00000519152 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
CPEB4-205ENST00000519152 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
CPEB4-205ENST00000519152 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
CPEB4-205ENST00000519152 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
CPEB4-205ENST00000519152 KIF13AQ9H1H9 1805 aa14.13□□□□□ -0.15
CPEB4-205ENST00000519152 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
CPEB4-205ENST00000519152 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
CPEB4-205ENST00000519152 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
CPEB4-205ENST00000519152 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.16
CPEB4-205ENST00000519152 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
CPEB4-205ENST00000519152 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms