RNA–Protein interactions for RNA: ENST00000460989.5

PDE9A-215, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best)

Gene PDE9A, Length 1,521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-215ENST00000460989 NISCHQ9Y2I1 1504 aa43.23■■■■■ 4.51
PDE9A-215ENST00000460989 CCDC180Q9P1Z9 1646 aa37.97■■■■□ 3.67
PDE9A-215ENST00000460989 ABCC9O60706 1549 aa36.5■■■■□ 3.43
PDE9A-215ENST00000460989 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
PDE9A-215ENST00000460989 DCAF1Q9Y4B6 1507 aa35.82■■■■□ 3.33
PDE9A-215ENST00000460989 DCAF8L2P0C7V8 631 aa35.81■■■■□ 3.32
PDE9A-215ENST00000460989 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
PDE9A-215ENST00000460989 NACADO15069 1562 aa35.61■■■■□ 3.29
PDE9A-215ENST00000460989 RB1CC1Q8TDY2 1594 aa35.41■■■■□ 3.26
PDE9A-215ENST00000460989 SCRIBQ14160 1630 aa34.7■■■■□ 3.14
PDE9A-215ENST00000460989 SHROOM4Q9ULL8 1493 aa34.56■■■■□ 3.12
PDE9A-215ENST00000460989 UNC13AQ9UPW8 1703 aa34.53■■■■□ 3.12
PDE9A-215ENST00000460989 BICRAQ9NZM4 1560 aa34.37■■■■□ 3.09
PDE9A-215ENST00000460989 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
PDE9A-215ENST00000460989 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
PDE9A-215ENST00000460989 BAZ1AQ9NRL2 1556 aaPredicted RBP33.4■■■□□ 2.94
PDE9A-215ENST00000460989 EIF4G1Q04637 1599 aaKnown RBP33.37■■■□□ 2.93
PDE9A-215ENST00000460989 MROH2BQ7Z745 1585 aa33.31■■■□□ 2.92
PDE9A-215ENST00000460989 SMARCA4P51532 1647 aa33.3■■■□□ 2.92
PDE9A-215ENST00000460989 RSF1Q96T23 1441 aaPredicted RBP33.27■■■□□ 2.92
PDE9A-215ENST00000460989 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
PDE9A-215ENST00000460989 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
PDE9A-215ENST00000460989 ATAD2BQ9ULI0 1458 aa33.02■■■□□ 2.88
PDE9A-215ENST00000460989 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
PDE9A-215ENST00000460989 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
PDE9A-215ENST00000460989 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
PDE9A-215ENST00000460989 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
PDE9A-215ENST00000460989 WIZO95785 1651 aa32.92■■■□□ 2.86
PDE9A-215ENST00000460989 HMGXB3Q12766 1538 aa32.73■■■□□ 2.83
PDE9A-215ENST00000460989 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
PDE9A-215ENST00000460989 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
PDE9A-215ENST00000460989 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
PDE9A-215ENST00000460989 CADPSQ9ULU8 1353 aa32.01■■■□□ 2.71
PDE9A-215ENST00000460989 CFTRP13569 1480 aa31.97■■■□□ 2.71
PDE9A-215ENST00000460989 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
PDE9A-215ENST00000460989 NESP48681 1621 aa31.82■■■□□ 2.68
PDE9A-215ENST00000460989 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
PDE9A-215ENST00000460989 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
PDE9A-215ENST00000460989 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
PDE9A-215ENST00000460989 CEP164Q9UPV0 1460 aa31.42■■■□□ 2.62
PDE9A-215ENST00000460989 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
PDE9A-215ENST00000460989 KIF21AQ7Z4S6 1674 aa31.34■■■□□ 2.61
PDE9A-215ENST00000460989 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
PDE9A-215ENST00000460989 ABCC8Q09428 1581 aa31.29■■■□□ 2.6
PDE9A-215ENST00000460989 CHIC1Q5VXU3 224 aa31.29■■■□□ 2.6
PDE9A-215ENST00000460989 MRC2Q9UBG0 1479 aa31.24■■■□□ 2.59
PDE9A-215ENST00000460989 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
PDE9A-215ENST00000460989 CUX1P39880 1505 aa31.2■■■□□ 2.58
PDE9A-215ENST00000460989 TOPBP1Q92547 1522 aa31.15■■■□□ 2.58
PDE9A-215ENST00000460989 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
PDE9A-215ENST00000460989 TRIM41Q8WV44 630 aa31.12■■■□□ 2.57
PDE9A-215ENST00000460989 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
PDE9A-215ENST00000460989 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
PDE9A-215ENST00000460989 WDR62O43379 1518 aa31.11■■■□□ 2.57
PDE9A-215ENST00000460989 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
PDE9A-215ENST00000460989 BIVM-ERCC5R4GMW8 1640 aa31.05■■■□□ 2.56
PDE9A-215ENST00000460989 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
PDE9A-215ENST00000460989 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
PDE9A-215ENST00000460989 CUX2O14529 1486 aa30.87■■■□□ 2.53
PDE9A-215ENST00000460989 SOGA1O94964 1423 aa30.86■■■□□ 2.53
PDE9A-215ENST00000460989 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
PDE9A-215ENST00000460989 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
PDE9A-215ENST00000460989 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
PDE9A-215ENST00000460989 TARBP1Q13395 1621 aaKnown RBP30.73■■■□□ 2.51
PDE9A-215ENST00000460989 TDRD9Q8NDG6 1382 aaKnown RBP30.61■■■□□ 2.49
PDE9A-215ENST00000460989 KIF27Q86VH2 1401 aa30.59■■■□□ 2.49
PDE9A-215ENST00000460989 WDR97A6NE52 1622 aa30.57■■■□□ 2.48
PDE9A-215ENST00000460989 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.48
PDE9A-215ENST00000460989 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
PDE9A-215ENST00000460989 EEA1Q15075 1411 aa30.52■■■□□ 2.48
PDE9A-215ENST00000460989 AQRO60306 1485 aaKnown RBP eCLIP30.52■■■□□ 2.48
PDE9A-215ENST00000460989 GAPVD1Q14C86 1478 aa30.49■■■□□ 2.47
PDE9A-215ENST00000460989 ABCA5Q8WWZ7 1642 aa30.46■■■□□ 2.47
PDE9A-215ENST00000460989 IGF1RP08069 1367 aa30.46■■■□□ 2.47
PDE9A-215ENST00000460989 CSRNP3Q8WYN3 585 aa30.43■■■□□ 2.46
PDE9A-215ENST00000460989 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
PDE9A-215ENST00000460989 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
PDE9A-215ENST00000460989 EIF4G3O43432 1585 aaKnown RBP30.38■■■□□ 2.45
PDE9A-215ENST00000460989 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
PDE9A-215ENST00000460989 CARMIL1Q5VZK9 1371 aa30.24■■■□□ 2.43
PDE9A-215ENST00000460989 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
PDE9A-215ENST00000460989 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
PDE9A-215ENST00000460989 MAGI1Q96QZ7 1491 aaPredicted RBP30.22■■■□□ 2.43
PDE9A-215ENST00000460989 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
PDE9A-215ENST00000460989 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
PDE9A-215ENST00000460989 CUL7Q14999 1698 aa30.14■■■□□ 2.42
PDE9A-215ENST00000460989 RAPGEF2Q9Y4G8 1499 aa30.11■■■□□ 2.41
PDE9A-215ENST00000460989 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
PDE9A-215ENST00000460989 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
PDE9A-215ENST00000460989 CHMP7Q8WUX9 453 aaPredicted RBP30.06■■■□□ 2.4
PDE9A-215ENST00000460989 KIF21BO75037 1637 aa30.06■■■□□ 2.4
PDE9A-215ENST00000460989 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
PDE9A-215ENST00000460989 FBLN2P98095 1184 aa29.98■■■□□ 2.39
PDE9A-215ENST00000460989 GOLGA3Q08378 1498 aa29.98■■■□□ 2.39
PDE9A-215ENST00000460989 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
PDE9A-215ENST00000460989 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
PDE9A-215ENST00000460989 UBTFP17480 764 aaKnown RBP29.89■■■□□ 2.38
PDE9A-215ENST00000460989 NUP160Q12769 1436 aa29.86■■■□□ 2.37
PDE9A-215ENST00000460989 TNIKQ9UKE5 1360 aa29.83■■■□□ 2.37
PDE9A-215ENST00000460989 CHD1O14646 1710 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms