RNA–Protein interactions for RNA: ENST00000357681.9

ATP2B4-203, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B4, Length 8,968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-203ENST00000357681 MYT1Q01538 1121 aa14.89□□□□□ -0.03
ATP2B4-203ENST00000357681 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
ATP2B4-203ENST00000357681 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
ATP2B4-203ENST00000357681 YTHDC1Q96MU7 727 aaKnown RBP13.86□□□□□ -0.19
ATP2B4-203ENST00000357681 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
ATP2B4-203ENST00000357681 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
ATP2B4-203ENST00000357681 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.22
ATP2B4-203ENST00000357681 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
ATP2B4-203ENST00000357681 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
ATP2B4-203ENST00000357681 APLP2Q06481 763 aa13.39□□□□□ -0.27
ATP2B4-203ENST00000357681 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
ATP2B4-203ENST00000357681 NEFLP07196 543 aa13.35□□□□□ -0.27
ATP2B4-203ENST00000357681 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
ATP2B4-203ENST00000357681 SUPT5HO00267 1087 aaKnown RBP13.07□□□□□ -0.32
ATP2B4-203ENST00000357681 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
ATP2B4-203ENST00000357681 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
ATP2B4-203ENST00000357681 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
ATP2B4-203ENST00000357681 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
ATP2B4-203ENST00000357681 PCGF6Q9BYE7 350 aa12.87□□□□□ -0.35
ATP2B4-203ENST00000357681 GLIPR1L2Q4G1C9 344 aa12.83□□□□□ -0.35
ATP2B4-203ENST00000357681 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
ATP2B4-203ENST00000357681 HRCP23327 699 aa12.72□□□□□ -0.37
ATP2B4-203ENST00000357681 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
ATP2B4-203ENST00000357681 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
ATP2B4-203ENST00000357681 SHROOM4Q9ULL8 1493 aa12.47□□□□□ -0.41
ATP2B4-203ENST00000357681 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
ATP2B4-203ENST00000357681 ANP32BQ92688 251 aaKnown RBP12.42□□□□□ -0.42
ATP2B4-203ENST00000357681 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
ATP2B4-203ENST00000357681 ANP32AP39687 249 aaKnown RBP12.34□□□□□ -0.43
ATP2B4-203ENST00000357681 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
ATP2B4-203ENST00000357681 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
ATP2B4-203ENST00000357681 NEFMP07197 916 aa12.29□□□□□ -0.44
ATP2B4-203ENST00000357681 EIF5BO60841 1220 aaKnown RBP12.25□□□□□ -0.45
ATP2B4-203ENST00000357681 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
ATP2B4-203ENST00000357681 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
ATP2B4-203ENST00000357681 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
ATP2B4-203ENST00000357681 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.46
ATP2B4-203ENST00000357681 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
ATP2B4-203ENST00000357681 ANP32CO43423 234 aa12.15□□□□□ -0.46
ATP2B4-203ENST00000357681 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
ATP2B4-203ENST00000357681 ARID4BQ4LE39 1312 aaPredicted RBP12.09□□□□□ -0.47
ATP2B4-203ENST00000357681 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
ATP2B4-203ENST00000357681 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
ATP2B4-203ENST00000357681 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
ATP2B4-203ENST00000357681 EHMT2Q96KQ7 1210 aa12.05□□□□□ -0.48
ATP2B4-203ENST00000357681 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
ATP2B4-203ENST00000357681 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
ATP2B4-203ENST00000357681 CCDC180Q9P1Z9 1646 aa11.98□□□□□ -0.49
ATP2B4-203ENST00000357681 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
ATP2B4-203ENST00000357681 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
ATP2B4-203ENST00000357681 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
ATP2B4-203ENST00000357681 BECN1Q14457 450 aa11.9□□□□□ -0.5
ATP2B4-203ENST00000357681 HSP90AA1P07900 732 aaKnown RBP11.9□□□□□ -0.5
ATP2B4-203ENST00000357681 CHIC1Q5VXU3 224 aa11.88□□□□□ -0.51
ATP2B4-203ENST00000357681 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
ATP2B4-203ENST00000357681 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
ATP2B4-203ENST00000357681 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
ATP2B4-203ENST00000357681 CDK11BP21127 795 aaKnown RBP11.81□□□□□ -0.52
ATP2B4-203ENST00000357681 PTMSP20962 102 aa11.81□□□□□ -0.52
ATP2B4-203ENST00000357681 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
ATP2B4-203ENST00000357681 USP35Q9P2H5 1018 aa11.77□□□□□ -0.52
ATP2B4-203ENST00000357681 NRDCO43847 1150 aa11.76□□□□□ -0.53
ATP2B4-203ENST00000357681 L1TD1Q5T7N2 865 aaKnown RBP11.74□□□□□ -0.53
ATP2B4-203ENST00000357681 POLR3GLQ9BT43 218 aa11.74□□□□□ -0.53
ATP2B4-203ENST00000357681 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
ATP2B4-203ENST00000357681 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.53
ATP2B4-203ENST00000357681 CHMP4BQ9H444 224 aaKnown RBP11.71□□□□□ -0.54
ATP2B4-203ENST00000357681 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
ATP2B4-203ENST00000357681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
ATP2B4-203ENST00000357681 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
ATP2B4-203ENST00000357681 CCDC136Q96JN2 1154 aa11.68□□□□□ -0.54
ATP2B4-203ENST00000357681 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
ATP2B4-203ENST00000357681 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
ATP2B4-203ENST00000357681 EEA1Q15075 1411 aa11.64□□□□□ -0.55
ATP2B4-203ENST00000357681 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
ATP2B4-203ENST00000357681 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
ATP2B4-203ENST00000357681 FKBP8Q14318 412 aa11.61□□□□□ -0.55
ATP2B4-203ENST00000357681 ITGAEP38570 1179 aa11.59□□□□□ -0.55
ATP2B4-203ENST00000357681 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
ATP2B4-203ENST00000357681 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
ATP2B4-203ENST00000357681 ZRSR1Q15695 479 aaKnown RBP11.59□□□□□ -0.55
ATP2B4-203ENST00000357681 MS4A1P11836 297 aa11.59□□□□□ -0.55
ATP2B4-203ENST00000357681 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
ATP2B4-203ENST00000357681 BCANQ96GW7 911 aa11.56□□□□□ -0.56
ATP2B4-203ENST00000357681 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
ATP2B4-203ENST00000357681 LAS1LQ9Y4W2 734 aaKnown RBP11.55□□□□□ -0.56
ATP2B4-203ENST00000357681 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
ATP2B4-203ENST00000357681 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
ATP2B4-203ENST00000357681 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
ATP2B4-203ENST00000357681 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
ATP2B4-203ENST00000357681 LOC105371045A0A1W2PR82 267 aa11.5□□□□□ -0.57
ATP2B4-203ENST00000357681 MSNP26038 577 aaKnown RBP11.5□□□□□ -0.57
ATP2B4-203ENST00000357681 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
ATP2B4-203ENST00000357681 TIMELESSQ9UNS1 1208 aa11.49□□□□□ -0.57
ATP2B4-203ENST00000357681 DNTTIP2Q5QJE6 756 aaKnown RBP11.49□□□□□ -0.57
ATP2B4-203ENST00000357681 CALRP27797 417 aaKnown RBP11.49□□□□□ -0.57
ATP2B4-203ENST00000357681 NOP58Q9Y2X3 529 aaKnown RBP11.49□□□□□ -0.57
ATP2B4-203ENST00000357681 CDCA8Q53HL2 280 aa11.48□□□□□ -0.57
ATP2B4-203ENST00000357681 A0A0U1RQG5 324 aaPredicted RBP11.47□□□□□ -0.57
ATP2B4-203ENST00000357681 PNNQ9H307 717 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms