RNA–Protein interactions for RNA: ENST00000489319.5

PDE9A-224, Transcript of phosphodiesterase 9A, humanhuman

TSL 2

Gene PDE9A, Length 3,412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-224ENST00000489319 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
PDE9A-224ENST00000489319 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
PDE9A-224ENST00000489319 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.42
PDE9A-224ENST00000489319 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
PDE9A-224ENST00000489319 ZCCHC6Q5VYS8 1495 aaKnown RBP23.31■■□□□ 1.32
PDE9A-224ENST00000489319 NACADO15069 1562 aa23.26■■□□□ 1.31
PDE9A-224ENST00000489319 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
PDE9A-224ENST00000489319 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
PDE9A-224ENST00000489319 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
PDE9A-224ENST00000489319 ABCC9O60706 1549 aa22.61■■□□□ 1.21
PDE9A-224ENST00000489319 BICRAQ9NZM4 1560 aa22.54■■□□□ 1.2
PDE9A-224ENST00000489319 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
PDE9A-224ENST00000489319 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
PDE9A-224ENST00000489319 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
PDE9A-224ENST00000489319 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
PDE9A-224ENST00000489319 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
PDE9A-224ENST00000489319 HMGXB3Q12766 1538 aa21.51■■□□□ 1.03
PDE9A-224ENST00000489319 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
PDE9A-224ENST00000489319 PRDM2Q13029 1718 aa21.33■■□□□ 1
PDE9A-224ENST00000489319 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
PDE9A-224ENST00000489319 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
PDE9A-224ENST00000489319 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
PDE9A-224ENST00000489319 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
PDE9A-224ENST00000489319 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
PDE9A-224ENST00000489319 CECR2Q9BXF3 1484 aa20.95■□□□□ 0.94
PDE9A-224ENST00000489319 WIZO95785 1651 aa20.87■□□□□ 0.93
PDE9A-224ENST00000489319 RSF1Q96T23 1441 aaPredicted RBP20.8■□□□□ 0.92
PDE9A-224ENST00000489319 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
PDE9A-224ENST00000489319 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
PDE9A-224ENST00000489319 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
PDE9A-224ENST00000489319 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
PDE9A-224ENST00000489319 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDE9A-224ENST00000489319 CFTRP13569 1480 aa20.48■□□□□ 0.87
PDE9A-224ENST00000489319 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
PDE9A-224ENST00000489319 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
PDE9A-224ENST00000489319 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
PDE9A-224ENST00000489319 WDR62O43379 1518 aa20.39■□□□□ 0.85
PDE9A-224ENST00000489319 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
PDE9A-224ENST00000489319 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
PDE9A-224ENST00000489319 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.83
PDE9A-224ENST00000489319 CUX2O14529 1486 aa20.21■□□□□ 0.83
PDE9A-224ENST00000489319 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
PDE9A-224ENST00000489319 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
PDE9A-224ENST00000489319 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
PDE9A-224ENST00000489319 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
PDE9A-224ENST00000489319 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
PDE9A-224ENST00000489319 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
PDE9A-224ENST00000489319 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
PDE9A-224ENST00000489319 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
PDE9A-224ENST00000489319 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
PDE9A-224ENST00000489319 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
PDE9A-224ENST00000489319 NESP48681 1621 aa19.88■□□□□ 0.77
PDE9A-224ENST00000489319 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
PDE9A-224ENST00000489319 CUX1P39880 1505 aa19.82■□□□□ 0.76
PDE9A-224ENST00000489319 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
PDE9A-224ENST00000489319 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
PDE9A-224ENST00000489319 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
PDE9A-224ENST00000489319 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
PDE9A-224ENST00000489319 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
PDE9A-224ENST00000489319 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
PDE9A-224ENST00000489319 CUL7Q14999 1698 aa19.61■□□□□ 0.73
PDE9A-224ENST00000489319 ERICH3Q5RHP9 1530 aa19.6■□□□□ 0.73
PDE9A-224ENST00000489319 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
PDE9A-224ENST00000489319 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
PDE9A-224ENST00000489319 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
PDE9A-224ENST00000489319 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
PDE9A-224ENST00000489319 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
PDE9A-224ENST00000489319 MAGI1Q96QZ7 1491 aaPredicted RBP19.41■□□□□ 0.7
PDE9A-224ENST00000489319 CHD1O14646 1710 aa19.41■□□□□ 0.7
PDE9A-224ENST00000489319 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
PDE9A-224ENST00000489319 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
PDE9A-224ENST00000489319 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
PDE9A-224ENST00000489319 KIF21BO75037 1637 aa19.32■□□□□ 0.68
PDE9A-224ENST00000489319 CTTNBP2Q8WZ74 1663 aa19.31■□□□□ 0.68
PDE9A-224ENST00000489319 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
PDE9A-224ENST00000489319 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.67
PDE9A-224ENST00000489319 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
PDE9A-224ENST00000489319 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
PDE9A-224ENST00000489319 NUP160Q12769 1436 aa19.2■□□□□ 0.66
PDE9A-224ENST00000489319 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
PDE9A-224ENST00000489319 EEA1Q15075 1411 aa19.2■□□□□ 0.66
PDE9A-224ENST00000489319 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
PDE9A-224ENST00000489319 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
PDE9A-224ENST00000489319 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
PDE9A-224ENST00000489319 PRXQ9BXM0 1461 aa19.12■□□□□ 0.65
PDE9A-224ENST00000489319 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
PDE9A-224ENST00000489319 SOGA1O94964 1423 aa19.1■□□□□ 0.65
PDE9A-224ENST00000489319 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
PDE9A-224ENST00000489319 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
PDE9A-224ENST00000489319 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
PDE9A-224ENST00000489319 FHAD1B1AJZ9 1412 aa19.05■□□□□ 0.64
PDE9A-224ENST00000489319 UGGT2Q9NYU1 1516 aa19.04■□□□□ 0.64
PDE9A-224ENST00000489319 GRIN2AQ12879 1464 aa19.02■□□□□ 0.63
PDE9A-224ENST00000489319 FAM9AQ8IZU1 332 aaPredicted RBP18.99■□□□□ 0.63
PDE9A-224ENST00000489319 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
PDE9A-224ENST00000489319 HRCP23327 699 aa18.95■□□□□ 0.62
PDE9A-224ENST00000489319 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
PDE9A-224ENST00000489319 IGF1RP08069 1367 aa18.88■□□□□ 0.61
PDE9A-224ENST00000489319 RIMBP3CA6NJZ7 1639 aa18.86■□□□□ 0.61
PDE9A-224ENST00000489319 RIMBP3BA6NNM3 1639 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms