RNA–Protein interactions for RNA: ENST00000328862.10

PDE9A-202, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-202ENST00000328862 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
PDE9A-202ENST00000328862 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
PDE9A-202ENST00000328862 ABCC9O60706 1549 aa25.91■■□□□ 1.74
PDE9A-202ENST00000328862 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
PDE9A-202ENST00000328862 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
PDE9A-202ENST00000328862 NACADO15069 1562 aa24.92■■□□□ 1.58
PDE9A-202ENST00000328862 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
PDE9A-202ENST00000328862 MYO15BQ96JP2 1530 aa24.8■■□□□ 1.56
PDE9A-202ENST00000328862 DCAF1Q9Y4B6 1507 aa24.79■■□□□ 1.56
PDE9A-202ENST00000328862 UNC13AQ9UPW8 1703 aa24.46■■□□□ 1.51
PDE9A-202ENST00000328862 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
PDE9A-202ENST00000328862 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
PDE9A-202ENST00000328862 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
PDE9A-202ENST00000328862 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
PDE9A-202ENST00000328862 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
PDE9A-202ENST00000328862 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
PDE9A-202ENST00000328862 CECR2Q9BXF3 1484 aa23.45■■□□□ 1.34
PDE9A-202ENST00000328862 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
PDE9A-202ENST00000328862 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
PDE9A-202ENST00000328862 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
PDE9A-202ENST00000328862 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.31
PDE9A-202ENST00000328862 ATAD2BQ9ULI0 1458 aa23.09■■□□□ 1.29
PDE9A-202ENST00000328862 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
PDE9A-202ENST00000328862 NCAPD3P42695 1498 aa23■■□□□ 1.27
PDE9A-202ENST00000328862 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
PDE9A-202ENST00000328862 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
PDE9A-202ENST00000328862 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
PDE9A-202ENST00000328862 WIZO95785 1651 aa22.97■■□□□ 1.27
PDE9A-202ENST00000328862 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
PDE9A-202ENST00000328862 BAZ1BQ9UIG0 1483 aaKnown RBP22.9■■□□□ 1.26
PDE9A-202ENST00000328862 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
PDE9A-202ENST00000328862 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
PDE9A-202ENST00000328862 NESP48681 1621 aa22.51■■□□□ 1.19
PDE9A-202ENST00000328862 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
PDE9A-202ENST00000328862 HRCP23327 699 aa22.43■■□□□ 1.18
PDE9A-202ENST00000328862 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
PDE9A-202ENST00000328862 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
PDE9A-202ENST00000328862 CFTRP13569 1480 aa22.27■■□□□ 1.16
PDE9A-202ENST00000328862 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
PDE9A-202ENST00000328862 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
PDE9A-202ENST00000328862 PDS5BQ9NTI5 1447 aa22.19■■□□□ 1.14
PDE9A-202ENST00000328862 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
PDE9A-202ENST00000328862 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
PDE9A-202ENST00000328862 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
PDE9A-202ENST00000328862 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
PDE9A-202ENST00000328862 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
PDE9A-202ENST00000328862 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
PDE9A-202ENST00000328862 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
PDE9A-202ENST00000328862 WDR62O43379 1518 aa21.92■■□□□ 1.1
PDE9A-202ENST00000328862 CUX2O14529 1486 aa21.91■■□□□ 1.1
PDE9A-202ENST00000328862 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
PDE9A-202ENST00000328862 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
PDE9A-202ENST00000328862 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
PDE9A-202ENST00000328862 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
PDE9A-202ENST00000328862 CUX1P39880 1505 aa21.75■■□□□ 1.07
PDE9A-202ENST00000328862 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
PDE9A-202ENST00000328862 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
PDE9A-202ENST00000328862 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
PDE9A-202ENST00000328862 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
PDE9A-202ENST00000328862 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
PDE9A-202ENST00000328862 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
PDE9A-202ENST00000328862 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
PDE9A-202ENST00000328862 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
PDE9A-202ENST00000328862 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
PDE9A-202ENST00000328862 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
PDE9A-202ENST00000328862 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
PDE9A-202ENST00000328862 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
PDE9A-202ENST00000328862 SOGA1O94964 1423 aa21.53■■□□□ 1.04
PDE9A-202ENST00000328862 ZEB1P37275 1124 aaPredicted RBP21.47■■□□□ 1.03
PDE9A-202ENST00000328862 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
PDE9A-202ENST00000328862 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
PDE9A-202ENST00000328862 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
PDE9A-202ENST00000328862 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDE9A-202ENST00000328862 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
PDE9A-202ENST00000328862 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
PDE9A-202ENST00000328862 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
PDE9A-202ENST00000328862 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
PDE9A-202ENST00000328862 PBRM1Q86U86 1689 aa21.27■■□□□ 1
PDE9A-202ENST00000328862 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
PDE9A-202ENST00000328862 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
PDE9A-202ENST00000328862 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
PDE9A-202ENST00000328862 CHD1O14646 1710 aa21.16■□□□□ 0.98
PDE9A-202ENST00000328862 MAGI1Q96QZ7 1491 aaPredicted RBP21.14■□□□□ 0.98
PDE9A-202ENST00000328862 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
PDE9A-202ENST00000328862 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
PDE9A-202ENST00000328862 FBLN2P98095 1184 aa21.12■□□□□ 0.97
PDE9A-202ENST00000328862 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
PDE9A-202ENST00000328862 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
PDE9A-202ENST00000328862 SYNJ2O15056 1496 aa21.08■□□□□ 0.96
PDE9A-202ENST00000328862 IGF1RP08069 1367 aa21.06■□□□□ 0.96
PDE9A-202ENST00000328862 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
PDE9A-202ENST00000328862 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
PDE9A-202ENST00000328862 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
PDE9A-202ENST00000328862 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
PDE9A-202ENST00000328862 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
PDE9A-202ENST00000328862 CUL7Q14999 1698 aa20.97■□□□□ 0.95
PDE9A-202ENST00000328862 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
PDE9A-202ENST00000328862 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
PDE9A-202ENST00000328862 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
PDE9A-202ENST00000328862 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms