RNA–Protein interactions for RNA: ENST00000335440.10

PDE9A-203, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-203ENST00000335440 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
PDE9A-203ENST00000335440 CCDC180Q9P1Z9 1646 aa36.66■■■■□ 3.46
PDE9A-203ENST00000335440 ABCC9O60706 1549 aa35.21■■■■□ 3.23
PDE9A-203ENST00000335440 ZCCHC6Q5VYS8 1495 aaKnown RBP34.64■■■■□ 3.14
PDE9A-203ENST00000335440 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
PDE9A-203ENST00000335440 NACADO15069 1562 aa34.29■■■■□ 3.08
PDE9A-203ENST00000335440 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
PDE9A-203ENST00000335440 MYO15BQ96JP2 1530 aa34.28■■■■□ 3.08
PDE9A-203ENST00000335440 RB1CC1Q8TDY2 1594 aa34.19■■■■□ 3.06
PDE9A-203ENST00000335440 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
PDE9A-203ENST00000335440 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
PDE9A-203ENST00000335440 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
PDE9A-203ENST00000335440 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
PDE9A-203ENST00000335440 PABPN1Q86U42 306 aaKnown RBP eCLIP32.96■■■□□ 2.87
PDE9A-203ENST00000335440 EIF4G1Q04637 1599 aaKnown RBP32.21■■■□□ 2.75
PDE9A-203ENST00000335440 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
PDE9A-203ENST00000335440 BAZ1AQ9NRL2 1556 aaPredicted RBP32.1■■■□□ 2.73
PDE9A-203ENST00000335440 SMARCA4P51532 1647 aa32.05■■■□□ 2.72
PDE9A-203ENST00000335440 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
PDE9A-203ENST00000335440 MROH2BQ7Z745 1585 aa31.92■■■□□ 2.7
PDE9A-203ENST00000335440 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
PDE9A-203ENST00000335440 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
PDE9A-203ENST00000335440 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
PDE9A-203ENST00000335440 SMARCA2P51531 1590 aa31.72■■■□□ 2.67
PDE9A-203ENST00000335440 ATAD2BQ9ULI0 1458 aa31.69■■■□□ 2.66
PDE9A-203ENST00000335440 WIZO95785 1651 aa31.63■■■□□ 2.65
PDE9A-203ENST00000335440 NCAPD3P42695 1498 aa31.6■■■□□ 2.65
PDE9A-203ENST00000335440 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
PDE9A-203ENST00000335440 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
PDE9A-203ENST00000335440 TOP2AP11388 1531 aaKnown RBP31.33■■■□□ 2.61
PDE9A-203ENST00000335440 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
PDE9A-203ENST00000335440 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
PDE9A-203ENST00000335440 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
PDE9A-203ENST00000335440 CADPSQ9ULU8 1353 aa30.69■■■□□ 2.5
PDE9A-203ENST00000335440 CFTRP13569 1480 aa30.65■■■□□ 2.5
PDE9A-203ENST00000335440 NESP48681 1621 aa30.64■■■□□ 2.5
PDE9A-203ENST00000335440 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
PDE9A-203ENST00000335440 PDS5BQ9NTI5 1447 aa30.45■■■□□ 2.47
PDE9A-203ENST00000335440 KIF21AQ7Z4S6 1674 aa30.38■■■□□ 2.45
PDE9A-203ENST00000335440 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
PDE9A-203ENST00000335440 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
PDE9A-203ENST00000335440 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
PDE9A-203ENST00000335440 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
PDE9A-203ENST00000335440 MRC2Q9UBG0 1479 aa30.11■■■□□ 2.41
PDE9A-203ENST00000335440 WDR62O43379 1518 aa30.01■■■□□ 2.4
PDE9A-203ENST00000335440 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
PDE9A-203ENST00000335440 ABCC8Q09428 1581 aa30■■■□□ 2.39
PDE9A-203ENST00000335440 DNMBPQ6XZF7 1577 aa29.97■■■□□ 2.39
PDE9A-203ENST00000335440 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
PDE9A-203ENST00000335440 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
PDE9A-203ENST00000335440 CUX1P39880 1505 aa29.92■■■□□ 2.38
PDE9A-203ENST00000335440 BIVM-ERCC5R4GMW8 1640 aa29.86■■■□□ 2.37
PDE9A-203ENST00000335440 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
PDE9A-203ENST00000335440 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
PDE9A-203ENST00000335440 CUX2O14529 1486 aa29.83■■■□□ 2.37
PDE9A-203ENST00000335440 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
PDE9A-203ENST00000335440 POLA1P09884 1462 aaPredicted RBP29.72■■■□□ 2.35
PDE9A-203ENST00000335440 IFT140Q96RY7 1462 aa29.61■■■□□ 2.33
PDE9A-203ENST00000335440 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
PDE9A-203ENST00000335440 SOGA1O94964 1423 aa29.58■■■□□ 2.33
PDE9A-203ENST00000335440 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
PDE9A-203ENST00000335440 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
PDE9A-203ENST00000335440 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
PDE9A-203ENST00000335440 WDR97A6NE52 1622 aa29.52■■■□□ 2.32
PDE9A-203ENST00000335440 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
PDE9A-203ENST00000335440 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
PDE9A-203ENST00000335440 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
PDE9A-203ENST00000335440 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
PDE9A-203ENST00000335440 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
PDE9A-203ENST00000335440 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
PDE9A-203ENST00000335440 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
PDE9A-203ENST00000335440 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
PDE9A-203ENST00000335440 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
PDE9A-203ENST00000335440 GRIN2BQ13224 1484 aa29.19■■■□□ 2.26
PDE9A-203ENST00000335440 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
PDE9A-203ENST00000335440 RUSC2Q8N2Y8 1516 aa29.12■■■□□ 2.25
PDE9A-203ENST00000335440 EEA1Q15075 1411 aa29.11■■■□□ 2.25
PDE9A-203ENST00000335440 MAGI1Q96QZ7 1491 aaPredicted RBP29.08■■■□□ 2.25
PDE9A-203ENST00000335440 SNAPC4Q5SXM2 1469 aa29.07■■■□□ 2.24
PDE9A-203ENST00000335440 IGF1RP08069 1367 aa29.04■■■□□ 2.24
PDE9A-203ENST00000335440 CUL7Q14999 1698 aa29.04■■■□□ 2.24
PDE9A-203ENST00000335440 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
PDE9A-203ENST00000335440 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
PDE9A-203ENST00000335440 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
PDE9A-203ENST00000335440 CHD1O14646 1710 aa28.93■■■□□ 2.22
PDE9A-203ENST00000335440 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
PDE9A-203ENST00000335440 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
PDE9A-203ENST00000335440 CARMIL1Q5VZK9 1371 aa28.9■■■□□ 2.22
PDE9A-203ENST00000335440 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
PDE9A-203ENST00000335440 PRXQ9BXM0 1461 aa28.85■■■□□ 2.21
PDE9A-203ENST00000335440 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
PDE9A-203ENST00000335440 FBLN2P98095 1184 aa28.82■■■□□ 2.2
PDE9A-203ENST00000335440 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
PDE9A-203ENST00000335440 KIF21BO75037 1637 aa28.78■■■□□ 2.2
PDE9A-203ENST00000335440 NUP160Q12769 1436 aa28.68■■■□□ 2.18
PDE9A-203ENST00000335440 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
PDE9A-203ENST00000335440 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
PDE9A-203ENST00000335440 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
PDE9A-203ENST00000335440 CTTNBP2Q8WZ74 1663 aa28.6■■■□□ 2.17
PDE9A-203ENST00000335440 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms