RNA–Protein interactions for RNA: ENST00000495521.5

PDE9A-227, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best)

Gene PDE9A, Length 1,565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-227ENST00000495521 NISCHQ9Y2I1 1504 aa43.23■■■■■ 4.51
PDE9A-227ENST00000495521 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
PDE9A-227ENST00000495521 ZCCHC6Q5VYS8 1495 aaKnown RBP36.3■■■■□ 3.4
PDE9A-227ENST00000495521 ABCC9O60706 1549 aa35.81■■■■□ 3.32
PDE9A-227ENST00000495521 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
PDE9A-227ENST00000495521 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
PDE9A-227ENST00000495521 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
PDE9A-227ENST00000495521 NACADO15069 1562 aa35.28■■■■□ 3.24
PDE9A-227ENST00000495521 SHROOM4Q9ULL8 1493 aa35.06■■■■□ 3.2
PDE9A-227ENST00000495521 RB1CC1Q8TDY2 1594 aa35.02■■■■□ 3.2
PDE9A-227ENST00000495521 SCRIBQ14160 1630 aa34.72■■■■□ 3.15
PDE9A-227ENST00000495521 UNC13AQ9UPW8 1703 aa34.25■■■■□ 3.07
PDE9A-227ENST00000495521 BICRAQ9NZM4 1560 aa33.87■■■■□ 3.01
PDE9A-227ENST00000495521 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
PDE9A-227ENST00000495521 SUPT5HO00267 1087 aaKnown RBP33.67■■■□□ 2.98
PDE9A-227ENST00000495521 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
PDE9A-227ENST00000495521 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
PDE9A-227ENST00000495521 RSF1Q96T23 1441 aaPredicted RBP33.43■■■□□ 2.94
PDE9A-227ENST00000495521 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
PDE9A-227ENST00000495521 SMARCA4P51532 1647 aa33.29■■■□□ 2.92
PDE9A-227ENST00000495521 WIZO95785 1651 aa33.09■■■□□ 2.89
PDE9A-227ENST00000495521 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
PDE9A-227ENST00000495521 PEG3Q9GZU2 1588 aa32.9■■■□□ 2.86
PDE9A-227ENST00000495521 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
PDE9A-227ENST00000495521 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
PDE9A-227ENST00000495521 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
PDE9A-227ENST00000495521 BAZ1BQ9UIG0 1483 aaKnown RBP32.59■■■□□ 2.81
PDE9A-227ENST00000495521 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
PDE9A-227ENST00000495521 HMGXB3Q12766 1538 aa32.5■■■□□ 2.79
PDE9A-227ENST00000495521 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
PDE9A-227ENST00000495521 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
PDE9A-227ENST00000495521 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
PDE9A-227ENST00000495521 CFTRP13569 1480 aa31.74■■■□□ 2.67
PDE9A-227ENST00000495521 TRIM41Q8WV44 630 aa31.73■■■□□ 2.67
PDE9A-227ENST00000495521 PRDM2Q13029 1718 aa31.67■■■□□ 2.66
PDE9A-227ENST00000495521 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
PDE9A-227ENST00000495521 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
PDE9A-227ENST00000495521 DNAJC5BQ9UF47 199 aa31.59■■■□□ 2.65
PDE9A-227ENST00000495521 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
PDE9A-227ENST00000495521 LAMC3Q9Y6N6 1575 aa31.48■■■□□ 2.63
PDE9A-227ENST00000495521 SYNJ1O43426 1573 aa31.38■■■□□ 2.61
PDE9A-227ENST00000495521 NESP48681 1621 aa31.36■■■□□ 2.61
PDE9A-227ENST00000495521 FANCD2Q9BXW9 1451 aa31.31■■■□□ 2.6
PDE9A-227ENST00000495521 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
PDE9A-227ENST00000495521 BIVM-ERCC5R4GMW8 1640 aa31.29■■■□□ 2.6
PDE9A-227ENST00000495521 PDS5BQ9NTI5 1447 aa31.23■■■□□ 2.59
PDE9A-227ENST00000495521 CUX1P39880 1505 aa31.21■■■□□ 2.59
PDE9A-227ENST00000495521 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
PDE9A-227ENST00000495521 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
PDE9A-227ENST00000495521 KIF21AQ7Z4S6 1674 aa31.07■■■□□ 2.56
PDE9A-227ENST00000495521 EEA1Q15075 1411 aa31.07■■■□□ 2.56
PDE9A-227ENST00000495521 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
PDE9A-227ENST00000495521 SOGA1O94964 1423 aa31.01■■■□□ 2.55
PDE9A-227ENST00000495521 TOPBP1Q92547 1522 aa30.96■■■□□ 2.55
PDE9A-227ENST00000495521 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
PDE9A-227ENST00000495521 URB2Q14146 1524 aaKnown RBP30.9■■■□□ 2.54
PDE9A-227ENST00000495521 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
PDE9A-227ENST00000495521 LOC105371045A0A1W2PR82 267 aa30.85■■■□□ 2.53
PDE9A-227ENST00000495521 MRC2Q9UBG0 1479 aa30.83■■■□□ 2.53
PDE9A-227ENST00000495521 CSRNP3Q8WYN3 585 aa30.81■■■□□ 2.52
PDE9A-227ENST00000495521 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
PDE9A-227ENST00000495521 POLA1P09884 1462 aaPredicted RBP30.78■■■□□ 2.52
PDE9A-227ENST00000495521 KIF27Q86VH2 1401 aa30.77■■■□□ 2.52
PDE9A-227ENST00000495521 CUX2O14529 1486 aa30.69■■■□□ 2.5
PDE9A-227ENST00000495521 WDR62O43379 1518 aa30.67■■■□□ 2.5
PDE9A-227ENST00000495521 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
PDE9A-227ENST00000495521 KIF21BO75037 1637 aa30.65■■■□□ 2.5
PDE9A-227ENST00000495521 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
PDE9A-227ENST00000495521 THOC2Q8NI27 1593 aaKnown RBP30.6■■■□□ 2.49
PDE9A-227ENST00000495521 EHMT2Q96KQ7 1210 aa30.6■■■□□ 2.49
PDE9A-227ENST00000495521 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
PDE9A-227ENST00000495521 GOLGA3Q08378 1498 aa30.59■■■□□ 2.49
PDE9A-227ENST00000495521 TARBP1Q13395 1621 aaKnown RBP30.5■■■□□ 2.47
PDE9A-227ENST00000495521 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
PDE9A-227ENST00000495521 PRXQ9BXM0 1461 aa30.47■■■□□ 2.47
PDE9A-227ENST00000495521 IFT140Q96RY7 1462 aa30.44■■■□□ 2.46
PDE9A-227ENST00000495521 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
PDE9A-227ENST00000495521 IGF1RP08069 1367 aa30.43■■■□□ 2.46
PDE9A-227ENST00000495521 TNIKQ9UKE5 1360 aa30.43■■■□□ 2.46
PDE9A-227ENST00000495521 UBTFP17480 764 aaKnown RBP30.41■■■□□ 2.46
PDE9A-227ENST00000495521 RAPGEF2Q9Y4G8 1499 aa30.41■■■□□ 2.46
PDE9A-227ENST00000495521 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
PDE9A-227ENST00000495521 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
PDE9A-227ENST00000495521 CUL7Q14999 1698 aa30.35■■■□□ 2.45
PDE9A-227ENST00000495521 CARMIL1Q5VZK9 1371 aa30.31■■■□□ 2.44
PDE9A-227ENST00000495521 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
PDE9A-227ENST00000495521 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
PDE9A-227ENST00000495521 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
PDE9A-227ENST00000495521 ZNF608Q9ULD9 1512 aaPredicted RBP30.18■■■□□ 2.42
PDE9A-227ENST00000495521 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
PDE9A-227ENST00000495521 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
PDE9A-227ENST00000495521 CLIP1P30622 1438 aa30.07■■■□□ 2.4
PDE9A-227ENST00000495521 ADAMTS12P58397 1594 aa30.06■■■□□ 2.4
PDE9A-227ENST00000495521 FHAD1B1AJZ9 1412 aa30.04■■■□□ 2.4
PDE9A-227ENST00000495521 CTTNBP2Q8WZ74 1663 aa29.97■■■□□ 2.39
PDE9A-227ENST00000495521 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
PDE9A-227ENST00000495521 MAGI1Q96QZ7 1491 aaPredicted RBP29.95■■■□□ 2.38
PDE9A-227ENST00000495521 RANGAP1P46060 587 aaPredicted RBP29.9■■■□□ 2.38
PDE9A-227ENST00000495521 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
PDE9A-227ENST00000495521 VPS8Q8N3P4 1428 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms